; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G06105 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G06105
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING-H2 finger protein ATL74-like
Genome locationClcChr11:5999525..6000630
RNA-Seq ExpressionClc11G06105
SyntenyClc11G06105
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052006.1 RING-H2 finger protein ATL72 [Cucumis melo var. makuwa]6.4e-9892.5Show/hide
Query:  MESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIP
        MES+HHR R HRLLLDADTTAAPSNGSRTRNSY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRL A+GLKKSALRQIP
Subjt:  MESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDEIT
        VAVYGSE+GLEIRETDCPICLGDFI GEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSL+EQQS SESA AEAGNRP GN S +GQGEISITVDEIT
Subjt:  VAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDEIT

KAG7016045.1 RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-9787.08Show/hide
Query:  IKQLAAPMTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGL
        +K  AAPM M SDHHR RPHRLLLDA+TT APSNGSRTRNSY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FETGGGTASRLAATGL
Subjt:  IKQLAAPMTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGL

Query:  KKSALRQIPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGE
        KKSALR++PV VYGSESGL IRETDCPICLGDFI GEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSL EQQSASES  A+AGNRP GN S +GQGE
Subjt:  KKSALRQIPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGE

Query:  ISITVDEIT
        ISI +D+I+
Subjt:  ISITVDEIT

XP_022993116.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]1.0e-9588.61Show/hide
Query:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ
        M M SDHHR RPHRLLLDA+TT APSNGSRTRNSY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FETGGGTASRLAATGLKKSALR+
Subjt:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE
        +PV VYGSESGL IRETDCPICLGDFI GEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSL EQQSASES  A+AGNRP GNPS +GQGEISI +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE

Query:  IT
        I+
Subjt:  IT

XP_023550807.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]8.6e-9588.12Show/hide
Query:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ
        M M SDHHR RPHRLLLDA+TT APSNGSRTRNSY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FETGGGTASRLAATGLKKSALR+
Subjt:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE
        +PV VYGSESGL IRETDCPICLGDFI GEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSL EQQSASES  A+AGNRP GN S +GQGEISI +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE

Query:  IT
        I+
Subjt:  IT

XP_038885444.1 RING-H2 finger protein ATL74-like [Benincasa hispida]2.5e-9494.27Show/hide
Query:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ
        MTMES+HHR RPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALI ALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ
Subjt:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQG
        IPVAVYGSESGL+IRETDCPICLGDFI GEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESA AEAGN P GN S +GQG
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQG

TrEMBL top hitse value%identityAlignment
A0A0A0KAH2 RING-type domain-containing protein2.4e-9589.6Show/hide
Query:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ
        M MES+HHR RP RLLLD DTTA PSNGSRTRNSY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRL ATGLKKSALRQ
Subjt:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE
        IPVAVYGSE+GLEIRETDCPICLGDF+ GEKIK+LPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQS SESA  EAGNR  GN S +GQGEISITVD 
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE

Query:  IT
        IT
Subjt:  IT

A0A5D3BXT6 RING-H2 finger protein ATL723.1e-9892.5Show/hide
Query:  MESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIP
        MES+HHR R HRLLLDADTTAAPSNGSRTRNSY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRL A+GLKKSALRQIP
Subjt:  MESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDEIT
        VAVYGSE+GLEIRETDCPICLGDFI GEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSL+EQQS SESA AEAGNRP GN S +GQGEISITVDEIT
Subjt:  VAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDEIT

A0A6J1BZW4 RING-H2 finger protein ATL741.8e-9089.58Show/hide
Query:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ
        M M SDHHR RPHR LLD D TA PSNG+RTR+SYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFET GGT++RLAATGLKKSALRQ
Subjt:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQG
        IPVAVYGSESGLEIRETDCPICLGDFI GEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSLLEQQS SESA AEAGNRP GN S  GQG
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQG

A0A6J1FF16 RING-H2 finger protein ATL74-like1.2e-9487.62Show/hide
Query:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ
        M M SDHHR RPHRLLLDA+TT APSNGSRTRNSY+NEANFDTNMVIILAALLCALICALGLNSIVRCA RCSRRF+FETGGGTASRLAATGLKKSALR+
Subjt:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE
        +PV VYGSESGL IRETDCPICLGDFI GEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSL EQQSASES  A+AGNRP GN S +GQGEISI +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE

Query:  IT
        I+
Subjt:  IT

A0A6J1JVF4 RING-H2 finger protein ATL74-like4.9e-9688.61Show/hide
Query:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ
        M M SDHHR RPHRLLLDA+TT APSNGSRTRNSY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FETGGGTASRLAATGLKKSALR+
Subjt:  MTMESDHHRDRPHRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE
        +PV VYGSESGL IRETDCPICLGDFI GEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSL EQQSASES  A+AGNRP GNPS +GQGEISI +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDE

Query:  IT
        I+
Subjt:  IT

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL103.5e-3047.01Show/hide
Query:  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAAT---GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFITGEKI
        ++E N   N++++L+ L+C +IC LGL+ I+RCALR S RF       + S    +   G+KK ALR  PV  Y  E  L   + +C ICL DF++GE++
Subjt:  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAAT---GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFITGEKI

Query:  KVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE
        ++LPKCNHGFHVRCID WL  H +CP CR  L+E
Subjt:  KVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE

Q6NQG7 RING-H2 finger protein ATL783.8e-3750.67Show/hide
Query:  DADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGT-ASRLAATGLKKSALRQIPVAVYGSESGLEIRE
        D   T APS        Y  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS     E GG     RL  TG+K+ AL+      Y +E  L   +
Subjt:  DADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGT-ASRLAATGLKKSALRQIPVAVYGSESGLEIRE

Query:  TDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE
        T+C ICL +F+  E++K+LP C+HGFHVRCID WL+SHSSCPTCR  L++
Subjt:  TDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE

Q9FLC6 RING-H2 finger protein ATL731.8e-4257.14Show/hide
Query:  TTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGLEIRETDCP
        T A P     + ++  N A+ DT+MVIILAALLCALICALG+NS++RC LRC+RRF         +   A G+KK AL+ IPV  Y  E  L+++ T+C 
Subjt:  TTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGLEIRETDCP

Query:  ICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESA
        ICLGDF+ GE ++VLPKCNHGFHV+CIDTWL SHSSCPTCRQSLLE Q+ +  +
Subjt:  ICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESA

Q9LZV8 RING-H2 finger protein ATL744.4e-4155.84Show/hide
Query:  HRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGL
        HRLLL++      ++GS   + Y+ + NFD NMVIILAALLCALI ALGLNSI+RCA+RC    +     GT +  A  GLKK  L++ PVA YGS   +
Subjt:  HRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGL

Query:  EIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE
        +I  T+C ICLG+F  GE+++VLP CNH FH+ CIDTWL SHSSCP CR SL+E
Subjt:  EIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE

Q9SG96 RING-H2 finger protein ATL722.5e-4460.12Show/hide
Query:  RLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASR--------LAATGLKKSALRQIPVAV
        RLLL+     AP+N +       N+  FDTNMVIILAALLCALICAL LNS +RC LR +RRF  +     AS          AATGLKK AL+QIPV +
Subjt:  RLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASR--------LAATGLKKSALRQIPVAV

Query:  YGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQ
        YGS   ++++ T+C ICLGDF  GEK++VLPKCNHGFHVRCIDTWL S SSCPTCRQSLL +Q
Subjt:  YGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQ

Arabidopsis top hitse value%identityAlignment
AT1G49220.1 RING/U-box superfamily protein2.5e-3147.01Show/hide
Query:  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAAT---GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFITGEKI
        ++E N   N++++L+ L+C +IC LGL+ I+RCALR S RF       + S    +   G+KK ALR  PV  Y  E  L   + +C ICL DF++GE++
Subjt:  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAAT---GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFITGEKI

Query:  KVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE
        ++LPKCNHGFHVRCID WL  H +CP CR  L+E
Subjt:  KVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE

AT1G49230.1 RING/U-box superfamily protein2.7e-3850.67Show/hide
Query:  DADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGT-ASRLAATGLKKSALRQIPVAVYGSESGLEIRE
        D   T APS        Y  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS     E GG     RL  TG+K+ AL+      Y +E  L   +
Subjt:  DADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGT-ASRLAATGLKKSALRQIPVAVYGSESGLEIRE

Query:  TDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE
        T+C ICL +F+  E++K+LP C+HGFHVRCID WL+SHSSCPTCR  L++
Subjt:  TDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE

AT3G10910.1 RING/U-box superfamily protein1.8e-4560.12Show/hide
Query:  RLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASR--------LAATGLKKSALRQIPVAV
        RLLL+     AP+N +       N+  FDTNMVIILAALLCALICAL LNS +RC LR +RRF  +     AS          AATGLKK AL+QIPV +
Subjt:  RLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASR--------LAATGLKKSALRQIPVAV

Query:  YGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQ
        YGS   ++++ T+C ICLGDF  GEK++VLPKCNHGFHVRCIDTWL S SSCPTCRQSLL +Q
Subjt:  YGSESGLEIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQ

AT5G01880.1 RING/U-box superfamily protein3.1e-4255.84Show/hide
Query:  HRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGL
        HRLLL++      ++GS   + Y+ + NFD NMVIILAALLCALI ALGLNSI+RCA+RC    +     GT +  A  GLKK  L++ PVA YGS   +
Subjt:  HRLLLDADTTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGL

Query:  EIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE
        +I  T+C ICLG+F  GE+++VLP CNH FH+ CIDTWL SHSSCP CR SL+E
Subjt:  EIRETDCPICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLE

AT5G05280.1 RING/U-box superfamily protein1.3e-4357.14Show/hide
Query:  TTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGLEIRETDCP
        T A P     + ++  N A+ DT+MVIILAALLCALICALG+NS++RC LRC+RRF         +   A G+KK AL+ IPV  Y  E  L+++ T+C 
Subjt:  TTAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGLEIRETDCP

Query:  ICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESA
        ICLGDF+ GE ++VLPKCNHGFHV+CIDTWL SHSSCPTCRQSLLE Q+ +  +
Subjt:  ICLGDFITGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCATCCTGGTTCCTCTCAGAAGGTCTGCCATGGGAAACCAAGCTTTTTGCAGCCATGGATACTATTCTTTGACCTGCTCTTGTCCAGAGAAGAGAAAGCTAGAAG
GTGGGAACAGAGAACACAAGGGTTTGATTGGTACATGAGTGGATATGAACTTTCTACTTTCAATCTTTCTCGTGGATCGATTCACTCCTCAACGAATTATAGAGTTCTGA
ATTATCAAGTTTCACTGTGGAATTTCATCAAACAGTTAGCAGCTCCTATGACGATGGAGTCCGATCACCACCGTGACCGTCCCCACCGCCTCCTCCTCGACGCCGATACG
ACGGCGGCACCGTCTAATGGAAGCAGAACGCGAAATTCATATAGCAACGAAGCCAATTTCGACACGAACATGGTGATAATTCTTGCCGCGTTACTCTGCGCGTTGATTTG
CGCTCTAGGACTCAACTCGATTGTCCGGTGCGCCCTCCGCTGCAGCCGGAGGTTCGCCTTCGAGACAGGCGGCGGAACAGCCTCGCGCCTCGCCGCTACAGGGTTAAAGA
AAAGCGCATTACGCCAAATTCCAGTTGCCGTATACGGGTCGGAATCGGGTCTAGAGATCCGAGAAACGGATTGCCCTATCTGCCTTGGAGATTTCATCACCGGTGAGAAA
ATCAAAGTACTCCCCAAATGTAACCACGGATTTCACGTTCGATGTATAGATACCTGGTTGGCTTCCCATTCGTCGTGTCCAACATGTCGTCAATCACTGCTCGAACAACA
GTCGGCTTCAGAATCGGCGGCAGCTGAAGCCGGAAACCGACCAAACGGAAATCCATCGGATACCGGCCAAGGTGAGATCTCCATAACCGTAGATGAAATTACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCATCCTGGTTCCTCTCAGAAGGTCTGCCATGGGAAACCAAGCTTTTTGCAGCCATGGATACTATTCTTTGACCTGCTCTTGTCCAGAGAAGAGAAAGCTAGAAG
GTGGGAACAGAGAACACAAGGGTTTGATTGGTACATGAGTGGATATGAACTTTCTACTTTCAATCTTTCTCGTGGATCGATTCACTCCTCAACGAATTATAGAGTTCTGA
ATTATCAAGTTTCACTGTGGAATTTCATCAAACAGTTAGCAGCTCCTATGACGATGGAGTCCGATCACCACCGTGACCGTCCCCACCGCCTCCTCCTCGACGCCGATACG
ACGGCGGCACCGTCTAATGGAAGCAGAACGCGAAATTCATATAGCAACGAAGCCAATTTCGACACGAACATGGTGATAATTCTTGCCGCGTTACTCTGCGCGTTGATTTG
CGCTCTAGGACTCAACTCGATTGTCCGGTGCGCCCTCCGCTGCAGCCGGAGGTTCGCCTTCGAGACAGGCGGCGGAACAGCCTCGCGCCTCGCCGCTACAGGGTTAAAGA
AAAGCGCATTACGCCAAATTCCAGTTGCCGTATACGGGTCGGAATCGGGTCTAGAGATCCGAGAAACGGATTGCCCTATCTGCCTTGGAGATTTCATCACCGGTGAGAAA
ATCAAAGTACTCCCCAAATGTAACCACGGATTTCACGTTCGATGTATAGATACCTGGTTGGCTTCCCATTCGTCGTGTCCAACATGTCGTCAATCACTGCTCGAACAACA
GTCGGCTTCAGAATCGGCGGCAGCTGAAGCCGGAAACCGACCAAACGGAAATCCATCGGATACCGGCCAAGGTGAGATCTCCATAACCGTAGATGAAATTACCTGA
Protein sequenceShow/hide protein sequence
MFHPGSSQKVCHGKPSFLQPWILFFDLLLSREEKARRWEQRTQGFDWYMSGYELSTFNLSRGSIHSSTNYRVLNYQVSLWNFIKQLAAPMTMESDHHRDRPHRLLLDADT
TAAPSNGSRTRNSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGTASRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFITGEK
IKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSASESAAAEAGNRPNGNPSDTGQGEISITVDEIT