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Clc11G06150 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G06150
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:6035542..6035942
RNA-Seq ExpressionClc11G06150
SyntenyClc11G06150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578478.1 hypothetical protein SDJN03_22926, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1980Show/hide
Query:  MANLFKASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKG
        MA LFK  K FFVFA+ILFIS SSSSARLLRDQSLSAAVPELKLD P    AALSREYGPL+LGF  K G IPPSGPSKG
Subjt:  MANLFKASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKG

KAG6602588.1 hypothetical protein SDJN03_07821, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1571.95Show/hide
Query:  MANLFKASKSFFVFALILFISI-SSSSARLLRDQSLS-AAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKG
        MANLFK SK   V ALIL +S+ SSSSARLLRD SLS AA+P+LKLD PAD   AL+ EYG LLLGF  K GGIPPSGPSKG
Subjt:  MANLFKASKSFFVFALILFISI-SSSSARLLRDQSLS-AAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKG

KGN45830.1 hypothetical protein Csa_005505 [Cucumis sativus]1.4e-1469.14Show/hide
Query:  MANLF-KASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKG
        MANLF K    FF+F LIL IS+SSSSARLLR QSLS   P LKLD PADPAA    EY  LLLGF  K G IPPSGPSKG
Subjt:  MANLF-KASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKG

TrEMBL top hitse value%identityAlignment
A0A0A0K7U2 Uncharacterized protein6.8e-1569.14Show/hide
Query:  MANLF-KASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKG
        MANLF K    FF+F LIL IS+SSSSARLLR QSLS   P LKLD PADPAA    EY  LLLGF  K G IPPSGPSKG
Subjt:  MANLF-KASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACCTCTTCAAAGCCTCGAAATCGTTCTTTGTTTTTGCTCTGATTCTTTTCATCTCTATTTCTTCTTCTTCGGCCAGATTGTTGCGTGACCAATCTCTTTCTGC
CGCCGTGCCGGAGTTGAAACTTGATAATCCGGCGGATCCGGCGGCGGCTCTGTCGAGGGAATATGGGCCGCTGCTTCTTGGGTTTTCTGCCAAAAGGGGGGGAATTCCGC
CGTCGGGACCGAGCAAAGGACCAACGACTTCAACACTTAGAATTTTTTGTTCGGTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTCATTTCATTATACACTTTATAAATCAGACTTAAATCAAACCAACTCCACATTCAATTCACATCTCCCAAATTTTTCATCATCTCAAAGCTTTCATTTTCTTAAAAG
ATTCCTTCAATGGCAAACCTCTTCAAAGCCTCGAAATCGTTCTTTGTTTTTGCTCTGATTCTTTTCATCTCTATTTCTTCTTCTTCGGCCAGATTGTTGCGTGACCAATC
TCTTTCTGCCGCCGTGCCGGAGTTGAAACTTGATAATCCGGCGGATCCGGCGGCGGCTCTGTCGAGGGAATATGGGCCGCTGCTTCTTGGGTTTTCTGCCAAAAGGGGGG
GAATTCCGCCGTCGGGACCGAGCAAAGGACCAACGACTTCAACACTTAGAATTTTTTGTTCGGTTTTTTAA
Protein sequenceShow/hide protein sequence
MANLFKASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFSAKRGGIPPSGPSKGPTTSTLRIFCSVF