; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G06340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G06340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A2
Genome locationClcChr11:6195498..6196239
RNA-Seq ExpressionClc11G06340
SyntenyClc11G06340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QRI59917.1 photosystem I P700 chlorophyll a apoprotein A2 [Derris harrowiana]5.3e-0492Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+PEGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
QRI60912.1 photosystem I P700 chlorophyll a apoprotein A2 [Psophocarpus tetragonolobus]5.3e-0492Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+PEGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
YP_009449973.1 photosystem I P700 apoprotein A2 [Burmannia disticha]5.3e-0492Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+PEGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
YP_009705506.1 photosystem I P700 apoprotein A2 [Valeriana officinalis]5.3e-0492Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+PEGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
YP_009766170.1 photosystem I P700 chlorophyll a apoprotein A2 [Afzelia quanzensis]9.1e-0488Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+P+GAGT+ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
TrEMBL top hitse value%identityAlignment
A0A1D8R9D5 Photosystem I P700 chlorophyll a apoprotein A24.4e-0488Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+P+GAGT+ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
A0A2H4EBQ9 Photosystem I P700 chlorophyll a apoprotein A22.6e-0492Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+PEGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
A0A5P8FX94 Photosystem I P700 chlorophyll a apoprotein A22.6e-0492Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+PEGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
A0A6B7EKY9 Photosystem I (Fragment)2.6e-0492Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+PEGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
A0A6B7EPS9 Photosystem I (Fragment)2.6e-0492Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+PEGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
SwissProt top hitse value%identityAlignment
A4GG98 Photosystem I P700 chlorophyll a apoprotein A21.6e-0688Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+P+GAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
A6BM24 Photosystem I P700 chlorophyll a apoprotein A25.9e-0688Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+ EGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
Q2PMU2 Photosystem I P700 chlorophyll a apoprotein A21.6e-0688Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+P+GAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A25.9e-0688Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+ EGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
Q8S8X5 Photosystem I P700 chlorophyll a apoprotein A25.9e-0688Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+ EGAGT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW
Arabidopsis top hitse value%identityAlignment
ATCG00340.1 Photosystem I, PsaA/PsaB protein2.1e-0680Show/hide
Query:  GSPEGAGTTILTLLGGFHPQTQSLW
        G+ +G+GT ILTLLGGFHPQTQSLW
Subjt:  GSPEGAGTTILTLLGGFHPQTQSLW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAGCTTTCCACCCCCTATTTATGAGTCATTTTTTTCATTTCATTGGTCCTTATTTCTTATTTCAGCATATGGCCTTGAATGGATTGCCTGCCTTTCATAGCTT
ACTAATAGATACTAGTAGGAACTACAAACAGCTATCAAGATCGGATCAACTAGATGTTCTATGCTTTCAGATCAAATCATCCATTGGTAGCCCCGAAGGAGCAGGAACTA
CCATTCTAACCCTTCTCGGGGGATTCCATCCGCAAACGCAAAGTTTATGGAGGAAGAGGCGGGATATGTCGTCAGTGTAG
mRNA sequenceShow/hide mRNA sequence
GCGATCGATGGAGGAGCTGGCAGTAGCTGAACTCTGGGAGAGACTGGAAGAGGCCGTGGAAGGGACTGTCGAGATGGTGTAACAAGTGGTGGTGACCACCCGGTCTTCAT
TAGCTATTTATGGCAGGAGCTCTTTCGTTTACAAGGGACACAATTTAACATGAGTACAGCTTTCCACCCCCTATTTATGAGTCATTTTTTTCATTTCATTGGTCCTTATT
TCTTATTTCAGCATATGGCCTTGAATGGATTGCCTGCCTTTCATAGCTTACTAATAGATACTAGTAGGAACTACAAACAGCTATCAAGATCGGATCAACTAGATGTTCTA
TGCTTTCAGATCAAATCATCCATTGGTAGCCCCGAAGGAGCAGGAACTACCATTCTAACCCTTCTCGGGGGATTCCATCCGCAAACGCAAAGTTTATGGAGGAAGAGGCG
GGATATGTCGTCAGTGTAGAAAGAGAATCTTCTCATTCTGAAAATGCCCCTTTAGCCCACTCTCTTTTTACATAGCGTGGGAGACAGGGATAAAGATCTTAATGTTTGGT
GCCGCGAAACCTTTGATAGAAATGGGTGGATGGTCAGTTATCATACAAAGGTATATCCTTCATTCCTCAAGCGTTGCTAGGTGGTAATAATGCTTCTTGCTTGATAGCTC
AGGTGCACCATTGCCTTACCACTTGGCCACGCCCCATTTATATTCAACATTAATAAACACTAATATTGGTAGTGGTTGGTCG
Protein sequenceShow/hide protein sequence
MSTAFHPLFMSHFFHFIGPYFLFQHMALNGLPAFHSLLIDTSRNYKQLSRSDQLDVLCFQIKSSIGSPEGAGTTILTLLGGFHPQTQSLWRKRRDMSSV