; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G07300 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G07300
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationClcChr11:7463061..7465814
RNA-Seq ExpressionClc11G07300
SyntenyClc11G07300
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602677.1 hypothetical protein SDJN03_07910, partial [Cucurbita argyrosperma subsp. sororia]2.7e-12286.48Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF +LRN ANPS  FSF VND  N WTSE PG FALP +DFIRESRRGFAK RKSNESSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIAAVSVLDSKTLSINPYDPN                  TLKNLESAIVSSPLGLAPRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKE+DE+TKKFIKSAEDLCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

KAG7033363.1 frr [Cucurbita argyrosperma subsp. argyrosperma]3.2e-12386.83Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF +LRN ANPS  FSF VND  N WTSE PG FALPP+DFIRESRRGFAK RKSNESSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIAAVSVLDSKTLSINPYDPN                  TLKNLESAIVSSPLGLAPRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKE+DE+TKKFIKSAEDLCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

XP_022990977.1 uncharacterized protein LOC111487708 [Cucurbita maxima]9.4e-12386.83Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSF YR+F +LRN ANPS  FSF VND  N WTSE PGVFALPP+DFIRESRRGFAK RKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIAAVSVLDSKTLSINPYDPN                  TLKNLESAIVSSPLGLAPRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKE+DE+TKKFIKSAEDLCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

XP_023544000.1 uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo]4.2e-12386.83Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF +LRN ANPS   SF VND  NSWTSE PG FALPP+DFIRESRRGFAK RKSNESSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIAAVSVLDSKTLSINPYDPN                  TLKNLESAIVSSPLGLAPRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKE+DE+TKKFIKSAEDLCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

XP_038885564.1 ribosome-recycling factor isoform X1 [Benincasa hispida]2.2e-12488.61Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF ILRN AN + KFSFIVND SNS TSETP VFALPPSDF+RESRRGFAK RKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIA VSVLD KTLSINPYDPN                  TLKNLESAIVSSPLGLAPRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKE+DE+TKKFIKSAEDLCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

TrEMBL top hitse value%identityAlignment
A0A1S3B2S9 Ribosome-recycling factor, chloroplastic8.9e-11983.63Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF ILRN AN +C FSF +N  SNSWTS+T   FALPPSDFIRESRRGFAK RKSNESSTS+AEAL DIRPTIK+NASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVETSGVK+PLNQIAAVSVLDSKTLSINPYDP+                  TLKNLESAI+SSPLG+APRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKK+SSSYPKDDMKRLEKE+DE+TKKFIKSAE+LCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

A0A5D3DLY3 Ribosome-recycling factor, chloroplastic8.9e-11983.63Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF ILRN AN +C FSF +N  SNSWTS+T   FALPPSDFIRESRRGFAK RKSNESSTS+AEAL DIRPTIK+NASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVETSGVK+PLNQIAAVSVLDSKTLSINPYDP+                  TLKNLESAI+SSPLG+APRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKK+SSSYPKDDMKRLEKE+DE+TKKFIKSAE+LCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

A0A6J1BWU9 Ribosome-recycling factor, chloroplastic5.1e-12285.41Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS SYRNF + RN A PS KFSF VNDPS +WTSETPGVFALPP+DFIRESRRGFAKARKSN+SSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVETSG+KMPLNQIA VSVLDSKTLSINPYDPN                  TLKNLESAIVSSPLGLAPRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKE+DE+TKKFIKSAEDLCKAKEKEI GG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

A0A6J1GLU1 Ribosome-recycling factor, chloroplastic1.3e-12286.48Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF +LRN ANPS  FSF V D  N WTSE PG FALPP+DFIRESRRGFAK RKSNESSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIAAVSVLDSKTLSINPYDPN                  TLKNLESAIVSSPLGLAPRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKE+DE+TKKFIKSAEDLCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

A0A6J1JKE4 Ribosome-recycling factor, chloroplastic4.6e-12386.83Show/hide
Query:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSF YR+F +LRN ANPS  FSF VND  N WTSE PGVFALPP+DFIRESRRGFAK RKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIAAVSVLDSKTLSINPYDPN                  TLKNLESAIVSSPLGLAPRVDGERLIAVI
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVI

Query:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG
        PPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKE+DE+TKKFIKSAEDLCKAKEKEITGG
Subjt:  PPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG

SwissProt top hitse value%identityAlignment
P61302 Ribosome-recycling factor1.8e-2336.73Show/hide
Query:  IKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSP
        +K NA ++ME  + +LS EL K+RTGRA   MLD I V   G   PL+Q+A++S  D+K+  I P++  +                  LK++E AI+ S 
Subjt:  IKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSP

Query:  LGLAPRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI
        LG+AP  DG+ +   +P LT+E  + + K V K  E++R ++R AR+ A D VKK+    +  +D+ K+ E +I +VT  FIK  + + + KEK I
Subjt:  LGLAPRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI

Q1IZI9 Ribosome-recycling factor4.0e-2336.45Show/hide
Query:  LPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLE
        +PDI+  I+A+A  +M  AI AL   LS LRTGRA+ G+L  ++VE  G  MP++Q+A+++  D++TL I P+D                     L  +E
Subjt:  LPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLE

Query:  SAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKE
         AI  S LGL P   G+ +   +P LT+E  + + K      E++R +IR  R+ A+D VKK+      D++KR E E+ ++T ++IK  ED    KE+E
Subjt:  SAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKE

Query:  ITG
        I G
Subjt:  ITG

Q39W85 Ribosome-recycling factor5.2e-2335.05Show/hide
Query:  ANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLG
        A+  + ME ++ AL  E  K+RTGRA++G+LD I VE  G   PL+Q+A +SV + +T++I P++  +     PV              +E AI+++ LG
Subjt:  ANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLG

Query:  LAPRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI
          P  DG+ +   +PPLT+E  + I K + K  ED++ ++R  R+  +D++KK+       +DD+KR EKE+ +VT  F+   E++   KEKE+
Subjt:  LAPRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI

Q3A398 Ribosome-recycling factor2.3e-2335.42Show/hide
Query:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLA
        A S M+ A+ +L  +++K+RTGRAS+ +LD ++V+  G   PLNQ+  ++V + + ++I P++  +                  L ++E AI  + LGL 
Subjt:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI
        P  DG  +  VIPP+T+E  + + K+V K  ED++  +R AR+ A D +KK+  +    +DD+KR EKEI +VT  ++   +DL   KEKEI
Subjt:  PRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI

Q9KA66 Ribosome-recycling factor1.8e-2336.27Show/hide
Query:  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGL
        +A  +M  A  AL  EL+KLR GRA+  MLD I VE  G + PLNQ+A +SV +++ L I P+D +                  ++ ++E AI  S LGL
Subjt:  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGL

Query:  APRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKK--MSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI
         P  DG  +   IPPLT+E  + + KLV K  E+++ ++R  R+ A D +KK        +DD++R+ +++ ++T K+I+  +   +AKEKEI
Subjt:  APRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKK--MSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor8.9e-7959.72Show/hide
Query:  MAMFLKRSFSYRN---FFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKS-NESSTSMAEALPDIRPTIKANASSQMEAA
        MAMF++R+ S RN   F    ++   S  FSFI + P+          F L   DF+R+SRRGFAK +KS ++S T M +A PDI PT+KA ASSQMEAA
Subjt:  MAMFLKRSFSYRN---FFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKS-NESSTSMAEALPDIRPTIKANASSQMEAA

Query:  IAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERL
        I ALS +L+KLRTGRA+ GMLDHI+VET GVKMPLN +A VSVLD KTLS+NPYDP+                  T+K LE AIV+SPLGL P++DG+RL
Subjt:  IAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERL

Query:  IAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEIT
        +A IP LTKEHIQA+CK+VTK  E  +QSIRRARQKA+DT+KK  SS PKD++KRLEKE+DE+TKKF+KSAED+CK+KEKEIT
Subjt:  IAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEIT

AT3G63190.1 ribosome recycling factor, chloroplast precursor6.1e-1930.65Show/hide
Query:  RPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIV
        +  I+ +  S+ME  I  L    + +RTGR+++ MLD I VE  G  + L  IA +S  D  +L + PYD +                  +LK +E AIV
Subjt:  RPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIV

Query:  SSPLGLAPRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI
        +S LG+ P  DG+ +   +PPLT +  + + K+V K  E+ + ++R  R+ A+ +  K+       +D++K L  ++ ++   ++K  E+L K KEKE+
Subjt:  SSPLGLAPRVDGERLIAVIPPLTKEHIQAICKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGTTTCTGAAACGTTCCTTCTCCTACAGAAATTTCTTTATTCTCCGTAACCTTGCAAATCCAAGTTGTAAATTTTCGTTCATTGTCAACGATCCCTCT
AACTCATGGACCTCCGAGACGCCTGGCGTATTTGCTCTTCCTCCTTCAGATTTTATCCGAGAAAGTCGTAGGGGTTTTGCTAAAGCCCGAAAATCAAATGAATCT
TCTACTAGTATGGCTGAGGCATTGCCTGATATTAGACCCACTATCAAAGCAAACGCTAGCTCCCAGATGGAGGCTGCGATAGCTGCATTATCGGGAGAATTAAGC
AAACTTCGAACGGGCAGGGCATCTTCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGATGCCGTTGAATCAGATCGCGGCTGTTTCGGTCTTG
GATTCAAAAACATTGTCTATAAATCCTTATGATCCTAATGTAACCAGCTTACAAAACCCTGTTCTTAAGTCATTTCTTCCTTTCTTGACGCAAACACTAAAGAAT
TTAGAGAGTGCTATAGTCTCGTCTCCTTTAGGTTTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAACATATCCAGGCC
ATATGTAAGCTGGTCACCAAGTGTTGTGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCCATGGATACAGTTAAAAAAATGAGCTCAAGCTACCCG
AAGGATGACATGAAAAGACTGGAAAAGGAAATAGATGAAGTAACTAAGAAGTTTATCAAGTCAGCCGAAGATCTTTGCAAGGCAAAGGAGAAGGAGATCACTGGA
GGTTAA
mRNA sequenceShow/hide mRNA sequence
CCACGGTTGGGGTTTACGAAAAACCCTAATCTTCTCAGCAAGCATCGAAATGAAGAAATAAGTTCGGTGGTTGGATCAGTTCGAGCATGAACGTCTAGTTCAATG
GCTATGTTTCTGAAACGTTCCTTCTCCTACAGAAATTTCTTTATTCTCCGTAACCTTGCAAATCCAAGTTGTAAATTTTCGTTCATTGTCAACGATCCCTCTAAC
TCATGGACCTCCGAGACGCCTGGCGTATTTGCTCTTCCTCCTTCAGATTTTATCCGAGAAAGTCGTAGGGGTTTTGCTAAAGCCCGAAAATCAAATGAATCTTCT
ACTAGTATGGCTGAGGCATTGCCTGATATTAGACCCACTATCAAAGCAAACGCTAGCTCCCAGATGGAGGCTGCGATAGCTGCATTATCGGGAGAATTAAGCAAA
CTTCGAACGGGCAGGGCATCTTCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGATGCCGTTGAATCAGATCGCGGCTGTTTCGGTCTTGGAT
TCAAAAACATTGTCTATAAATCCTTATGATCCTAATGTAACCAGCTTACAAAACCCTGTTCTTAAGTCATTTCTTCCTTTCTTGACGCAAACACTAAAGAATTTA
GAGAGTGCTATAGTCTCGTCTCCTTTAGGTTTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAACATATCCAGGCCATA
TGTAAGCTGGTCACCAAGTGTTGTGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCCATGGATACAGTTAAAAAAATGAGCTCAAGCTACCCGAAG
GATGACATGAAAAGACTGGAAAAGGAAATAGATGAAGTAACTAAGAAGTTTATCAAGTCAGCCGAAGATCTTTGCAAGGCAAAGGAGAAGGAGATCACTGGAGGT
TAAATATTTGACAAAAATTTGTAGTTCCCAATTTTGACAGATGAACCACTCAAATAATTTATTGTAATTTTCTTTTTAATTAAATATTAAGCCGTCCCATTATAG
AGCTTTTCATAACATATGGAGGGATGTAACAGTGAGTGAGGTGAGTATCTGTCATACTTCGAGGCATTGACTCAAATCCATCCAAATGGATTCCACAAAAGATGG
ATGTTGAAA
Protein sequenceShow/hide protein sequence
MAMFLKRSFSYRNFFILRNLANPSCKFSFIVNDPSNSWTSETPGVFALPPSDFIRESRRGFAKARKSNESSTSMAEALPDIRPTIKANASSQMEAAIAALSGELS
KLRTGRASSGMLDHIIVETSGVKMPLNQIAAVSVLDSKTLSINPYDPNVTSLQNPVLKSFLPFLTQTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQA
ICKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEIDEVTKKFIKSAEDLCKAKEKEITGG