CuGenDBv2

Gene ID	Clc11G07540
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	cytochrome c oxidase subunit 3
Genome location	ClcChr11:7680838..7681784
RNA-Seq Expression	Clc11G07540
Synteny	Clc11G07540
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ABG78622.1 cytochrome oxidase subunit III, partial [Capsicum annuum]

9.5e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

AKZ24689.1 cytochrome c oxidase subunit 3 [Physalis heterophylla]

9.5e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

PHT41048.1 Cytochrome c oxidase subunit 3 [Capsicum baccatum]

9.5e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

XP_015077999.1 uncharacterized protein LOC107021801 [Solanum pennellii]

9.5e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

YP_009049736.1 cytochrome oxidase subunit 3 [Capsicum annuum]

9.5e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

TrEMBL top hits

e value

%identity

Alignment

A0A142I0Z0 Cytochrome c oxidase subunit 3

4.6e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

A0A290WL11 Cytochrome c oxidase subunit 3

4.6e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

A0A7D7FER2 Cytochrome c oxidase subunit 3

4.6e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

A0A7S9DHA5 Cytochrome c oxidase subunit 3

4.6e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

A0A7S9H542 Cytochrome c oxidase subunit 3

4.6e-22

84.29

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Query:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        IP  + L P+    AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  IPDYSELNPI----AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

SwissProt top hits

e value

%identity

Alignment

P14853 Cytochrome c oxidase subunit 3

2.8e-24

98.21

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Query:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

P15953 Cytochrome c oxidase subunit 3

1.4e-23

96.43

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Query:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        AVTWAHHAIL GKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

P32808 Cytochrome c oxidase subunit 3

1.2e-22

94.64

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Query:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        AVTWAHHAIL GKEKRAVYALVATVSLALVFT FQGMEYYQAP TISDSIYGSTFF
Subjt:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

P92514 Cytochrome c oxidase subunit 3

1.4e-23

96.43

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Query:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        AVTWAHHAIL GKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

Q03227 Cytochrome c oxidase subunit 3

2.8e-24

98.21

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Query:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        AVTWAHHAIL GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

9.8e-25

96.43

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Query:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        AVTWAHHAIL GKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

ATMG00730.1 cytochrome c oxidase subunit 3

9.8e-25

96.43

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Query:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF
        AVTWAHHAIL GKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDSIYGSTFF
Subjt:  AVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFF

Sequences

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CDS sequence

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ATGGACCCAGATCCTAAAAACAACAACGCTGGTCGGGATCTCTCTGGTAAAAACGAAAGCGGAATTCCTGATTATTCAGAACTTAATCCAATCGCCGTAACTTGGGCTCA
TCATGCTATACTCGTGGGGAAGGAAAAACGAGCAGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCAC
CCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTGTGTTCAACTCCGCGGGTTAGCTGGTTGGAAGGCATTGCTTGCTTTCTGCCGTCTATCTTTCCCTTCT
TTCACTCGGTCAAGCGGCTTCGCTCCTTTCTTGTTGAGAATCTTATGTCTATAG

mRNA sequence

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ATAGCATAGTATTATCTGATTCATAGGGATACGAAAAAGTATTTTTAGTACCAAAATGGGGAATAGTAACAAAAGGGCGCATAATTTTTGTTACATTACTGTCAATTTGA
TATGTTGTTTTTTTCACCAAAAAAGAAGACCTTTCATTATTATTCATTGTTAATAATGATAAGAAACGAAAGTTTTTTTGAATGATTTTTGATCCTTCTTTACCCCATAA
TGATATTGAATAGAGGGAGTTATTTGTTTTTCCACTGTAGTTTTTACAATAAAGGTTTAAATGTCCATCAAAAGTAAGTAAGTAGATGCGAAACATATAAAATGCTGTTA
ATCCAGCTGTGGAACAGGCTATTATTGCGAAAATCGGTGAATACAACCAACTATCATTAAGAATTTCATCTTTGGACCAAAAGCAGGCAAGGGGTGGAATACCACAAAGA
GAAAGGGTACCTAATAAAAAAGCATTTTTTGTAATTGGCACATGCTTTGTTAAACCACCCATAAGAACCATATTCTGACTTTTATCGGGAGAATATCCAACAACGGATTC
CATTGAGTGAATAATGGACCCAGATCCTAAAAACAACAACGCTGGTCGGGATCTCTCTGGTAAAAACGAAAGCGGAATTCCTGATTATTCAGAACTTAATCCAATCGCCG
TAACTTGGGCTCATCATGCTATACTCGTGGGGAAGGAAAAACGAGCAGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAA
TATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTGTGTTCAACTCCGCGGGTTAGCTGGTTGGAAGGCATTGCTTGCTTTCTGCCGTCT
ATCTTTCCCTTCTTTCACTCGGTCAAGCGGCTTCGCTCCTTTCTTGTTGAGAATCTTATGTCTATAG

Protein sequence

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MDPDPKNNNAGRDLSGKNESGIPDYSELNPIAVTWAHHAILVGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFCVQLRGLAGWKALLAFCRLSFPS
FTRSSGFAPFLLRILCL

Clc11G07540 (gene) of Watermelon (cordophanus) v2 genome