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Clc11G07610 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G07610
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP synthase subunit alpha, chloroplastic
Genome locationClcChr11:7708369..7710789
RNA-Seq ExpressionClc11G07610
SyntenyClc11G07610
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR000793 - ATP synthase, alpha subunit, C-terminal
IPR001280 - Photosystem I PsaA/PsaB
IPR036408 - Photosystem I PsaA/PsaB superfamily
IPR038376 - ATP synthase, alpha subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AXU40403.1 ATP synthase CF1 alpha subunit [Gomphogyne cissiformis var. villosa]3.3e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

YP_009236266.1 ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum]3.3e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

YP_009317371.1 ATP synthase CF1 alpha subunit [Coccinia grandis]3.3e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

YP_009560820.1 AtpA [Trichosanthes kirilowii]3.3e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

YP_009651645.1 ATP synthase CF1 alpha subunit [Dillenia indica]3.3e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

TrEMBL top hitse value%identityAlignment
A0A291EX67 ATP synthase subunit alpha, chloroplastic1.6e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

A0A410HFF0 ATP synthase subunit alpha, chloroplastic1.6e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

A0A4P8VUF1 ATP synthase subunit alpha1.6e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

D3WAZ0 ATP synthase subunit alpha, chloroplastic1.6e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

D3WEH7 ATP synthase subunit alpha, chloroplastic1.6e-4198.99Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

SwissProt top hitse value%identityAlignment
A6MM21 ATP synthase subunit alpha, chloroplastic2.8e-4396.97Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQI+TIYTGTNGYLDSLEIGQ +
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

B1A920 ATP synthase subunit alpha, chloroplastic2.1e-4397.98Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGK KLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

Q0ZJ35 ATP synthase subunit alpha, chloroplastic2.1e-4396.97Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQF+SDLDKATQNQLARGQRLRELLKQSQ+APLTVEEQIMTIYTGTNGYLDSLEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

Q3C1H4 ATP synthase subunit alpha, chloroplastic2.8e-4396.97Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGK KLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLE+GQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

Q8S8Y3 ATP synthase subunit alpha, chloroplastic2.8e-4396.97Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGK KLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLE+GQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein1.6e-2565.26Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI
        AINVG+SVSRVGSAAQ+KAMKQV G SKLELAQ+ E+ AFAQF SDLD ATQ  L RG RL E+ KQ Q APL +E+QI+ IY   NG+ D + +
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI

AT5G47320.1 ribosomal protein S195.2e-0568.75Show/hide
Query:  FVDAFLLRMKKKRDPLLNRKIWSRRSSILPEF
        FVDAFL+   KK++  LNRKIWSRRS+ILPE+
Subjt:  FVDAFLLRMKKKRDPLLNRKIWSRRSSILPEF

ATCG00120.1 ATP synthase subunit alpha2.2e-4394.95Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR
        AINVGISVSRVGSAAQIKAMKQVAGK KLELAQFAELEAF+QF+SDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLD LEIGQ R
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR

ATCG00350.1 Photosystem I, PsaA/PsaB protein3.4e-2055.43Show/hide
Query:  LLNRKIWSRRSSILPEFA----------------CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSLSHQG--TSILQGRNTQRSL
        LL   +++R S ++P+ A                CQVSAWDHVFLGLFWMYN+ISVVIFHFSWKMQSDVWGS+S QG  T I  G   Q S+
Subjt:  LLNRKIWSRRSSILPEFA----------------CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSLSHQG--TSILQGRNTQRSL

ATMG01190.1 ATP synthase subunit 11.6e-2565.26Show/hide
Query:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI
        AINVG+SVSRVGSAAQ+KAMKQV G SKLELAQ+ E+ AFAQF SDLD ATQ  L RG RL E+ KQ Q APL +E+QI+ IY   NG+ D + +
Subjt:  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACACGCACGAATTGAACATAGATACATTCACCGAATCATTGATAAAGCAATTCGGCGCTATTAATGTGGGTATTTCCGTCTCCAGAGTAGGATCTGCAGCTCAAAT
TAAAGCCATGAAACAAGTAGCCGGCAAATCAAAATTGGAATTGGCTCAATTTGCCGAATTAGAAGCCTTTGCGCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATC
AATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGAACAGATAATGACTATTTATACCGGAACTAATGGTTATCTT
GATTCATTAGAAATTGGACAAGCAAGGGGCTTGATCGACATTCTTGTTGACTCTGATCCGGTCGAGGTGGTTTTCGTTTACCAGCGCGTAGGTGGTCTAAGTTCCTATGA
CCGAGTCTTTCTGGCCCCTGGCAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTT
TGCCGGAATTCGCATGTCAAGTATCCGCTTGGGATCATGTCTTCTTAGGGCTATTTTGGATGTACAATTCCATTTCGGTAGTAATATTCCATTTCAGTTGGAAAATGCAG
TCAGATGTTTGGGGTAGTTTAAGTCATCAAGGGACATCTATCCTGCAGGGTAGGAATACCCAGAGGTCTTTGTTTACCGTTTGCTTTGGGGATCAGGGTGCTGGTGCTCT
AGCAGTCAAACTTCCCCCGCGGATAGATCTCTTCTCCTTTTCTCGGCCTCTGACGCCCTCCTGCCCGGAACTAGTCCCGATGGAAGACCAGAAGACTTTTACGAACCTTG
AGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACACGCACGAATTGAACATAGATACATTCACCGAATCATTGATAAAGCAATTCGGCGCTATTAATGTGGGTATTTCCGTCTCCAGAGTAGGATCTGCAGCTCAAAT
TAAAGCCATGAAACAAGTAGCCGGCAAATCAAAATTGGAATTGGCTCAATTTGCCGAATTAGAAGCCTTTGCGCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATC
AATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGAACAGATAATGACTATTTATACCGGAACTAATGGTTATCTT
GATTCATTAGAAATTGGACAAGCAAGGGGCTTGATCGACATTCTTGTTGACTCTGATCCGGTCGAGGTGGTTTTCGTTTACCAGCGCGTAGGTGGTCTAAGTTCCTATGA
CCGAGTCTTTCTGGCCCCTGGCAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTT
TGCCGGAATTCGCATGTCAAGTATCCGCTTGGGATCATGTCTTCTTAGGGCTATTTTGGATGTACAATTCCATTTCGGTAGTAATATTCCATTTCAGTTGGAAAATGCAG
TCAGATGTTTGGGGTAGTTTAAGTCATCAAGGGACATCTATCCTGCAGGGTAGGAATACCCAGAGGTCTTTGTTTACCGTTTGCTTTGGGGATCAGGGTGCTGGTGCTCT
AGCAGTCAAACTTCCCCCGCGGATAGATCTCTTCTCCTTTTCTCGGCCTCTGACGCCCTCCTGCCCGGAACTAGTCCCGATGGAAGACCAGAAGACTTTTACGAACCTTG
AGCTCTAA
Protein sequenceShow/hide protein sequence
MYTHELNIDTFTESLIKQFGAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYL
DSLEIGQARGLIDILVDSDPVEVVFVYQRVGGLSSYDRVFLAPGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFACQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQ
SDVWGSLSHQGTSILQGRNTQRSLFTVCFGDQGAGALAVKLPPRIDLFSFSRPLTPSCPELVPMEDQKTFTNLEL