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Clc11G07620 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G07620
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome locationClcChr11:7711021..7713985
RNA-Seq ExpressionClc11G07620
SyntenyClc11G07620
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AWI73310.1 NADH dehydrogenase 19 kDa subunit [Willughbeia edulis]5.4e-1871.64Show/hide
Query:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+RI      K+     +PR P  F
Subjt:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
QAU08122.1 NdhJ, partial [Abelia forrestii]1.2e-1760.98Show/hide
Query:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        T +L  +PG      +ILYVYGYNYLRSQCAYDVAPGGLLAS+YHLTRIEYG+DQPEE+ I      K+     +PR P  F
Subjt:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
QFQ36651.1 NADH-plastoquinone oxidoreductase subunit J [Abelia uniflora]9.2e-1862.2Show/hide
Query:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        T +L  +PG      +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+     +PR P  F
Subjt:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
YP_009704890.1 NADH-plastoquinone oxidoreductase subunit J [Abelia chinensis]9.2e-1862.2Show/hide
Query:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        T +L  +PG      +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+     +PR P  F
Subjt:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
YP_009751402.1 NADH-plastoquinone oxidoreductase subunit J [Pedicularis oederi]9.2e-1871.64Show/hide
Query:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+     +PR PR F
Subjt:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
TrEMBL top hitse value%identityAlignment
A0A2S1UEI3 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic2.6e-1871.64Show/hide
Query:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+RI      K+     +PR P  F
Subjt:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
A0A4V1EJP6 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic4.5e-1862.2Show/hide
Query:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        T +L  +PG      +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+     +PR P  F
Subjt:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
A0A5P8G153 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic4.5e-1862.2Show/hide
Query:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        T +L  +PG      +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+     +PR P  F
Subjt:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
A0A5P8G180 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic4.5e-1862.2Show/hide
Query:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        T +L  +PG      +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+     +PR P  F
Subjt:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
A0A5P8G231 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic4.5e-1862.2Show/hide
Query:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        T +L  +PG      +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+     +PR P  F
Subjt:  TTSLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
SwissProt top hitse value%identityAlignment
A0ZZ38 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic6.0e-2070.15Show/hide
Query:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+    ++PR P  F
Subjt:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
B1A938 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic6.0e-2070.15Show/hide
Query:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+    ++PR P  F
Subjt:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
B2LMJ6 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic6.0e-2062.5Show/hide
Query:  SLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +L  +PG      +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+      PR P  F
Subjt:  SLSFRPG-----PIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
Q2L910 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic6.0e-2070.15Show/hide
Query:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEE+ I      K+    ++PR P  F
Subjt:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic4.6e-2071.64Show/hide
Query:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEE+ I      K+     +PR P  F
Subjt:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
Arabidopsis top hitse value%identityAlignment
ATCG00420.1 NADH dehydrogenase subunit J1.0e-1967.16Show/hide
Query:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF
        +ILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG++Q EE+ I      K+    ++PR P  F
Subjt:  IILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAACGGCCCCCGGATACAGTAACGATCATAGCGATCTCCTCTGGTACCTACTGGTACGTCAGGATCCAATTGGTCATGAACATCGTAAGGTGCAGCTCTTCGC
AAATCCCAGCATACCCCTGGTTGGGATGGGTAGGCCCACCACTTCACTTTCATTTAGGCCCGGGCCAATCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAAT
GTGCTTATGATGTAGCACCAGGCGGACTGTTGGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGTTGAGGATATTCAACCCTTTCCCT
TGTAAACTACTCGGGTTTTTGGCTTCGCCCCGATCCCCTCGTACCTTTACAGGGGACCCTATTGTTATTACACCTGTAAATCAGAATAAATGTTCTATCTGTAAAAGAGT
ATCTTCTCTTACTTACTCAATTCCATCTAGATGCCGCATAAAGAGAGAACTTTCTGGCAAGCTGCTCGACACAAAGAAAATAGATGAGATCTCCTCTCGCATATCGGTTG
TGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAACGGCCCCCGGATACAGTAACGATCATAGCGATCTCCTCTGGTACCTACTGGTACGTCAGGATCCAATTGGTCATGAACATCGTAAGGTGCAGCTCTTCGC
AAATCCCAGCATACCCCTGGTTGGGATGGGTAGGCCCACCACTTCACTTTCATTTAGGCCCGGGCCAATCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAAT
GTGCTTATGATGTAGCACCAGGCGGACTGTTGGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGTTGAGGATATTCAACCCTTTCCCT
TGTAAACTACTCGGGTTTTTGGCTTCGCCCCGATCCCCTCGTACCTTTACAGGGGACCCTATTGTTATTACACCTGTAAATCAGAATAAATGTTCTATCTGTAAAAGAGT
ATCTTCTCTTACTTACTCAATTCCATCTAGATGCCGCATAAAGAGAGAACTTTCTGGCAAGCTGCTCGACACAAAGAAAATAGATGAGATCTCCTCTCGCATATCGGTTG
TGTGA
Protein sequenceShow/hide protein sequence
MSITAPGYSNDHSDLLWYLLVRQDPIGHEHRKVQLFANPSIPLVGMGRPTTSLSFRPGPIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFP
CKLLGFLASPRSPRTFTGDPIVITPVNQNKCSICKRVSSLTYSIPSRCRIKRELSGKLLDTKKIDEISSRISVV