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Clc11G07660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G07660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description30S ribosomal protein S7, chloroplastic
Genome locationClcChr11:7721306..7721918
RNA-Seq ExpressionClc11G07660
SyntenyClc11G07660
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QOW06966.1 ribosomal protein S7 [Daphne genkwa]5.4e-1768.83Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S   +Q P+  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
QSJ48861.1 ribosomal protein S7 [Medicago arabica]4.2e-1768.83Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S    Q P+  G+P  + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANR+FAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
XP_033511663.1 30S ribosomal protein S7, chloroplastic-like [Nicotiana tomentosiformis]4.2e-1768.83Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+     Q P+  G+  R+ +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
YP_009343151.1 30S ribosomal protein S7 [Paris cronquistii]1.4e-1770.13Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S    Q P+  G+   + +   +   ASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
YP_009935315.1 ribosomal protein S7 [Edgeworthia chrysantha]5.4e-1768.83Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S   +Q P+  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
TrEMBL top hitse value%identityAlignment
A0A1L6V101 30S ribosomal protein S7, chloroplastic6.9e-1870.13Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S    Q P+  G+   + +   +   ASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
A0A1L6V2B8 30S ribosomal protein S7, chloroplastic6.9e-1870.13Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S    Q P+  G+   + +   +   ASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
A0A6C0MS16 30S ribosomal protein S7, chloroplastic6.9e-1870.13Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S    Q P+  G+   + +   +   ASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
A0A6C0MTQ0 30S ribosomal protein S7, chloroplastic6.9e-1870.13Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S    Q P+  G+   + +   +   ASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
A0A6M5AA45 30S ribosomal protein S7, chloroplastic6.9e-1870.13Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+S    Q P+  G+   + +   +   ASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
SwissProt top hitse value%identityAlignment
A6MMG8 30S ribosomal protein S7, chloroplastic2.7e-1968.83Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+     Q PL  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
B2LMN9 30S ribosomal protein S7, chloroplastic2.7e-1960.92Show/hide
Query:  LTKGNSHDEERISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        +T G +    R+     Q P+  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRK+EETHRMAEANRAFAHFR
Subjt:  LTKGNSHDEERISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
P62729 30S ribosomal protein S7, chloroplastic3.5e-1967.53Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+     Q P+  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Q09MB7 30S ribosomal protein S7, chloroplastic3.5e-1967.53Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+     Q P+  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Q1KXP8 30S ribosomal protein S7, chloroplastic2.7e-1960.92Show/hide
Query:  LTKGNSHDEERISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        +T G +    R+     Q P+  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRK+EETHRMAEANRAFAHFR
Subjt:  LTKGNSHDEERISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Arabidopsis top hitse value%identityAlignment
ATCG00900.1 Ribosomal protein S7p/S5e family protein3.3e-2067.53Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+     Q P+  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
ATCG01240.1 ribosomal protein S73.3e-2067.53Show/hide
Query:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
        R+     Q P+  G+   + +   +   ASRKRPGRNMAFKLS ELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  RISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGTCCACTCCTGGCTCGATGCACTTAACGAAAGGGAACTCTCACGATGAAGAAAGAATTTCCTTCGTAATTAAGCAGCATCCTTTAAGTAGGGGTGCGCC
GGACCGCCGACGAATAATAGGAGTCTATCCATCGAGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTTTGAATTAGTGGATGCTGCCAAAGGGA
GTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGATGTCCACTCCTGGCTCGATGCACTTAACGAAAGGGAACTCTCACGATGAAGAAAGAATTTCCTTCGTAATTAAGCAGCATCCTTTAAGTAGGGGTGCGCC
GGACCGCCGACGAATAATAGGAGTCTATCCATCGAGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTTTGAATTAGTGGATGCTGCCAAAGGGA
GTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA
Protein sequenceShow/hide protein sequence
MMMMSTPGSMHLTKGNSHDEERISFVIKQHPLSRGAPDRRRIIGVYPSRASRKRPGRNMAFKLSFELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR