; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G07735 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G07735
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein Ycf2
Genome locationClcChr11:7746758..7747499
RNA-Seq ExpressionClc11G07735
SyntenyClc11G07735
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR008543 - Uncharacterised protein family Ycf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ASY93839.1 Ycf2 [Brassica nigra]3.4e-1393.02Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP  L+
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
QKY62328.1 Ycf2 [Acer acuminatum]3.4e-1397.5Show/hide
Query:  SPIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        +PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  SPIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
YP_009476227.1 Ycf2 [Eurycorymbus cavaleriei]3.4e-1393.02Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP  L+
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
YP_009730709.1 Ycf2 [Sinapis alba]3.4e-1393.02Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP  L+
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
YP_009894841.1 Ycf2 [Dithyrea californica]3.4e-1393.02Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP  L+
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
TrEMBL top hitse value%identityAlignment
A0A218KGJ4 Protein Ycf21.6e-1393.02Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP  L+
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
A0A2P1FSY0 Protein Ycf21.6e-1393.02Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP  L+
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
A0A6C0M7R2 Protein Ycf21.6e-1393.02Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP  L+
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
A0A6M8YUE0 Protein Ycf21.6e-1393.02Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP  L+
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLN
A0A7G7XV85 Protein Ycf21.6e-1397.5Show/hide
Query:  SPIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        +PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  SPIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
SwissProt top hitse value%identityAlignment
A4QJF8 Protein Ycf25.8e-16100Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
A4QJP2 Protein Ycf25.8e-16100Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
A4QK61 Protein Ycf25.8e-16100Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
A4QKX4 Protein Ycf2 A5.8e-16100Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
A4QKZ7 Protein Ycf2 B5.8e-16100Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core4.1e-17100Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core4.1e-17100Show/hide
Query:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
        PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP
Subjt:  PIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACATTGGAAGCCCCATTCATAGGTCCGAGATCCACATCTATGAATTGAAAGGTCCGAATGATCAACTCTGCAATCAGTTGTTAGAATCAATAGGTCTTCAAAT
CGTTCATTTGAAAAAATTGAAACCTACTCCACTGAATCGAGGCCTGCCTGCCATCCACACCAGAATAAATGAAGTTTTCCGAAAAAACCTGCTAGTGGAGGAAGACCTCC
TAAGGATAAGAGACATAGGGCTAAAGAGAGAGCCAAAAGAGGATCTTTTGTGTATAATCCTGCATAATCTCGAATGTTATCAGTTCCGGTACGTAGACCAAATGATACAA
TGCGGTTTTCATCCATTAAATAATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGACATTGGAAGCCCCATTCATAGGTCCGAGATCCACATCTATGAATTGAAAGGTCCGAATGATCAACTCTGCAATCAGTTGTTAGAATCAATAGGTCTTCAAAT
CGTTCATTTGAAAAAATTGAAACCTACTCCACTGAATCGAGGCCTGCCTGCCATCCACACCAGAATAAATGAAGTTTTCCGAAAAAACCTGCTAGTGGAGGAAGACCTCC
TAAGGATAAGAGACATAGGGCTAAAGAGAGAGCCAAAAGAGGATCTTTTGTGTATAATCCTGCATAATCTCGAATGTTATCAGTTCCGGTACGTAGACCAAATGATACAA
TGCGGTTTTCATCCATTAAATAATATTTAA
Protein sequenceShow/hide protein sequence
MKDIGSPIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPTPLNRGLPAIHTRINEVFRKNLLVEEDLLRIRDIGLKREPKEDLLCIILHNLECYQFRYVDQMIQ
CGFHPLNNI