CuGenDBv2

Gene ID	Clc11G07850
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome location	ClcChr11:7783779..7784999
RNA-Seq Expression	Clc11G07850
Synteny	Clc11G07850
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88883.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria]

9.3e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

YP_009236283.1 NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum]

9.3e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

YP_009325992.1 NADH dehydrogenase subunit J [Citrullus lanatus]

9.3e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

YP_009526305.1 NADH dehydrogenase subunit J [Hemsleya lijiangensis]

9.3e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

YP_009752330.1 NADH dehydrogenase subunit J [Bryonia marmorata]

9.3e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

TrEMBL top hits

e value

%identity

Alignment

A0A109WWM6 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.5e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

A0A1P8LDY6 NADH-quinone oxidoreductase subunit C

4.5e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

A0A2Z2CGF1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.5e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

A0A6H0EQB7 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.5e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

X2F723 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.5e-15

100

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

SwissProt top hits

e value

%identity

Alignment

B0Z4L4 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.3e-16

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

B0Z4U8 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.3e-16

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

B1A938 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.3e-16

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQGHLS WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

7.9e-17

97.5

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

Q9MTP3 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.3e-16

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

Arabidopsis top hits

e value

%identity

Alignment

ATCG00420.1 NADH dehydrogenase subunit J

3.4e-15

87.5

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA
        MQG LS WL K GLVHRSLGFDYQGIETLQIKPE+WHSIA
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIA

Sequences

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CDS sequence

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ATGCAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGATTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCA
TTCCATTGCACAAGCGAAGGCGTGGTTGAGACTGACAGAGAAAGTCGATGCGAAGGTTCAGATCGAAGATCTTCGCGAGCTTCGTTTCTCAAACTCTAGCTTGTTCACAA
ATCAAATACAACATGCCACCTTAATGCACGGGACAGTTAGAAGGATTTGCACTCTTACTAAACCGGCCTTCGAGACGAAAGGAACGAAAGCTCGATGA

mRNA sequence

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Protein sequence

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MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAQAKAWLRLTEKVDAKVQIEDLRELRFSNSSLFTNQIQHATLMHGTVRRICTLTKPAFETKGTKAR

Clc11G07850 (gene) of Watermelon (cordophanus) v2 genome