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Clc11G07970 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G07970
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal_S7 domain-containing protein
Genome locationClcChr11:7819949..7824366
RNA-Seq ExpressionClc11G07970
SyntenyClc11G07970
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN70001.1 Ribosomal protein S7p/S5e family protein, partial [Prunus dulcis]1.5e-3094.59Show/hide
Query:  NRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESR
        NRSESNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+K RETDTQFKVSKQNSILDLIDTYRILWKAVFDES+
Subjt:  NRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESR

KAB2041250.1 hypothetical protein ES319_D02G135700v1 [Gossypium barbadense]8.9e-3187.8Show/hide
Query:  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY
        N +T+ NRS SNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+KGRETDTQFKVSKQNSILDLIDTY ILWK VFDESR+Y
Subjt:  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY

RZC88934.1 hypothetical protein C5167_030630 [Papaver somniferum]1.2e-3094.59Show/hide
Query:  SESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY
        SESNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+K RETDTQFKVSKQNSILDLIDTYRILWKAVFDESR+Y
Subjt:  SESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY

RZC92595.1 hypothetical protein C5167_029533 [Papaver somniferum]1.2e-3094.59Show/hide
Query:  SESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY
        SESNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+K RETDTQFKVSKQNSILDLIDTYRILWKAVFDESR+Y
Subjt:  SESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY

TYG46624.1 hypothetical protein ES288_D11G270400v1 [Gossypium darwinii]2.6e-3090.91Show/hide
Query:  LNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY
        LNRS SNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+KGRETDTQFKVSKQNSILDLIDTY I WK VFDESR+Y
Subjt:  LNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY

TrEMBL top hitse value%identityAlignment
A0A4Y7JJM5 Uncharacterized protein2.8e-3085.37Show/hide
Query:  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY
        N +T+++ SESNSNDSKH FLHYFGNPRTQS+GYVKYRISNPS+K RETDTQFKVSKQNSILDLIDTYRILWK VFDESR+Y
Subjt:  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY

A0A5D2AP26 Uncharacterized protein1.3e-3090.91Show/hide
Query:  LNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY
        LNRS SNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+KGRETDTQFKVSKQNSILDLIDTY I WK VFDESR+Y
Subjt:  LNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY

A0A5H2Y3L6 Ribosomal protein S7p/S5e family protein (Fragment)7.4e-3194.59Show/hide
Query:  NRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESR
        NRSESNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+K RETDTQFKVSKQNSILDLIDTYRILWKAVFDES+
Subjt:  NRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESR

A0A5J5SCK7 Uncharacterized protein4.3e-3187.8Show/hide
Query:  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY
        N +T+ NRS SNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+KGRETDTQFKVSKQNSILDLIDTY ILWK VFDESR+Y
Subjt:  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY

A0A6N2KTW4 Ribosomal_S7 domain-containing protein (Fragment)1.3e-3086.59Show/hide
Query:  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY
        NS    +RSESNSNDSKH FLHYFGNPRTQSYGY KYRISNPS+K RETDTQFKVSKQNSIL+LIDTYRILWKAVFDESR+Y
Subjt:  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAGAACTGCCAAAACCGAGAACTCAGTCACTCGTCTGAACAGGTCCGAGTCAAATAGTAATGATTCGAAGCACCTCTTTTTACACTATTTCGGAAACCCAAGGAC
TCAATCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAAGAAAGGGAGGGAAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAG
ATACATATAGAATTCTGTGGAAAGCCGTATTCGATGAAAGTCGTATCTACTCCACTCATTTCATAAAGTATTCTACCTGGTTTAACAACAGCTACCCAATATTCGGGGGA
TCCGCAAAATACGAAACTAATTATGACCTGAGGCCAACGTATTTCCCGGGGGAACCAGTAAATGATCCGTTCCCCTGTGGATCATGGCCTTACCACTCGGTCCCCGATGG
CCAGCGGGGGATTCGGTATAGTAGCTCACGTTCGGTTGCGCTGCGCGTTCCCGCTGGACACGTGTTAGCTGTAGGAAGTATGGTTCCGAAAGTGACTTTGGTTCGCCAGT
TCAGGCTCAACTCCTCGCTTTACGTTAGCGGACCCACAGGTCGGGCCGGGGCTCTGCGCTCTTTCTTGGTTGTTGGTGAAAAATCGAAAACTGTAAAAGTCGGATCGTTC
GAGAAGGCCATTGTAGTGCGCTTAAACGAGCGTTTGGGGGGTCCCACGATGAATCCTATGTCCGAGGCACTTCAAGGCACATTGTCAGCCCTAAGATTTTGGGTAGTGAG
TTCCGATGAAGAGCCGCCAGCGTCGCTGATGATGCAGAAAGCTTTTTTTTATAGAGAGAGAGTCAAGGGGGCTTCCGCGGGCGATTCTGTAACCGCAGGCAGCTCAGACC
CGACAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAGAACTGCCAAAACCGAGAACTCAGTCACTCGTCTGAACAGGTCCGAGTCAAATAGTAATGATTCGAAGCACCTCTTTTTACACTATTTCGGAAACCCAAGGAC
TCAATCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAAGAAAGGGAGGGAAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAG
ATACATATAGAATTCTGTGGAAAGCCGTATTCGATGAAAGTCGTATCTACTCCACTCATTTCATAAAGTATTCTACCTGGTTTAACAACAGCTACCCAATATTCGGGGGA
TCCGCAAAATACGAAACTAATTATGACCTGAGGCCAACGTATTTCCCGGGGGAACCAGTAAATGATCCGTTCCCCTGTGGATCATGGCCTTACCACTCGGTCCCCGATGG
CCAGCGGGGGATTCGGTATAGTAGCTCACGTTCGGTTGCGCTGCGCGTTCCCGCTGGACACGTGTTAGCTGTAGGAAGTATGGTTCCGAAAGTGACTTTGGTTCGCCAGT
TCAGGCTCAACTCCTCGCTTTACGTTAGCGGACCCACAGGTCGGGCCGGGGCTCTGCGCTCTTTCTTGGTTGTTGGTGAAAAATCGAAAACTGTAAAAGTCGGATCGTTC
GAGAAGGCCATTGTAGTGCGCTTAAACGAGCGTTTGGGGGGTCCCACGATGAATCCTATGTCCGAGGCACTTCAAGGCACATTGTCAGCCCTAAGATTTTGGGTAGTGAG
TTCCGATGAAGAGCCGCCAGCGTCGCTGATGATGCAGAAAGCTTTTTTTTATAGAGAGAGAGTCAAGGGGGCTTCCGCGGGCGATTCTGTAACCGCAGGCAGCTCAGACC
CGACAACATGA
Protein sequenceShow/hide protein sequence
MPRTAKTENSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIYSTHFIKYSTWFNNSYPIFGG
SAKYETNYDLRPTYFPGEPVNDPFPCGSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTLVRQFRLNSSLYVSGPTGRAGALRSFLVVGEKSKTVKVGSF
EKAIVVRLNERLGGPTMNPMSEALQGTLSALRFWVVSSDEEPPASLMMQKAFFYRERVKGASAGDSVTAGSSDPTT