CuGenDBv2

Gene ID	Clc11G08080
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	ClcChr11:7846636..7847056
RNA-Seq Expression	Clc11G08080
Synteny	Clc11G08080
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR014029 - NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

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GenBank top hits

e value

%identity

Alignment

AFB70573.1 NADH dehydrogenase subunit 7, partial [Pereskiopsis diguetii]

2.6e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

QJX65493.1 NADH-plastoquinone oxidoreductase subunit 7 [Mesua ferrea]

2.6e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

YP_009420851.1 NADH dehydrogenase subunit 7 [Citrullus colocynthis]

2.6e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

YP_009557444.1 NADH-plastoquinone oxidoreductase subunit 7 [Kewa sp. GY-2019]

2.6e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

YP_010119790.1 NADH-plastoquinone oxidoreductase subunit 7 [Hemsleya zhejiangensis]

2.6e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU61 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.3e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

A0A1X9Q1R4 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.3e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

A0A218KGA7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.3e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

A0A6H0ESV0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.3e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

G3ETV5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.3e-73

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

SwissProt top hits

e value

%identity

Alignment

B0Z4T1 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

7.6e-76

97.81

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLPYVTRWDYLATMFTEAIT+NGPEQLGNIQVPKRASYIR+IMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

B0Z515 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

7.6e-76

97.81

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLPYVTRWDYLATMFTEAIT+NGPEQLGNIQVPKRASYIR+IMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

7.6e-76

99.27

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

Q49KU2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.5e-76

99.27

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

3.4e-76

100

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Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

7.8e-76

97.08

Show/hide

Query:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
        MIVNMGPHHPSMHGVLRLI+TLDGEDV+DCEPILGYLHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR
Subjt:  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSR

Query:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA
        IASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEA
Subjt:  IASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA

ATMG00510.1 NADH dehydrogenase subunit 7

1.9e-29

46.62

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Query:  NMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIAS
        N GP HP+ HGV RL+L ++GE V   EP +G LHRG EK+ E +T +Q LPY  R DY++ M  E    +  E+L N +VP RA YIRV+  E++RI++
Subjt:  NMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIAS

Query:  HLLWLGPFMADIGAQTPFFYIFRERELVYDLFE
        H L L     D+GA TPF + F ERE + + +E
Subjt:  HLLWLGPFMADIGAQTPFFYIFRERELVYDLFE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATAGTGAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTT
ACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACCGTAA
ATGGTCCAGAACAGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCT
TTTATGGCGGATATTGGGGCACAGACTCCTTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATTTATTCGAAGCCCTCCTGTGA

mRNA sequence

Show/hide mRNA sequence

CATGATAGTGAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATT
TACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACCGTA
AATGGTCCAGAACAGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCC
TTTTATGGCGGATATTGGGGCACAGACTCCTTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATTTATTCGAAGCCCTCCTGTGA

Protein sequence

Show/hide protein sequence

MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP
FMADIGAQTPFFYIFRERELVYDLFEALL

Clc11G08080 (gene) of Watermelon (cordophanus) v2 genome