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Clc11G08170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G08170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein of unknown function (DUF 3339)
Genome locationClcChr11:7988052..7989048
RNA-Seq ExpressionClc11G08170
SyntenyClc11G08170
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005635 - nuclear envelope (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578365.1 hypothetical protein SDJN03_22813, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2794.29Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLF+LLTPGLLVQMPGKNR +EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

XP_022134304.1 uncharacterized protein LOC111006599 [Momordica charantia]8.3e-2895.71Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLF+LLTPGLLVQMPGK+R VEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

XP_022939120.1 uncharacterized protein LOC111445120 [Cucurbita moschata]1.1e-2794.29Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLF+LLTPGLLVQMPGKNR +EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

XP_022993368.1 uncharacterized protein LOC111489412 [Cucurbita maxima]1.1e-2794.29Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLF+LLTPGLLVQMPGKNR +EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

XP_023551540.1 uncharacterized protein LOC111809330 [Cucurbita pepo subsp. pepo]1.1e-2794.29Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLF+LLTPGLLVQMPGKNR +EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

TrEMBL top hitse value%identityAlignment
A0A2R6P938 Uncharacterized protein1.5e-2791.43Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        M+DWGPVFVAVVLF+LLTPGLL+Q+PG+NRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVY+GS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

A0A5D3BUE1 Uncharacterized protein7.6e-2792.86Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAV+LF+LLTPGLLVQMPGK+R VEFGNFQTSGVSILVHSILYFALICIFLLAV VHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

A0A6J1BYE9 uncharacterized protein LOC1110065994.0e-2895.71Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLF+LLTPGLLVQMPGK+R VEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

A0A6J1FLS0 uncharacterized protein LOC1114451205.3e-2894.29Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLF+LLTPGLLVQMPGKNR +EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

A0A6J1K207 uncharacterized protein LOC1114894125.3e-2894.29Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLF+LLTPGLLVQMPGKNR +EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein3.3e-2266.67Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHV
        M DWGPVFVAV LF+LLTPGLL+Q+PG+ R+VEFG FQTSG+S++VH+++YF L+CI LLA+ +H+
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHV

AT3G48660.1 Protein of unknown function (DUF 3339)1.2e-2165.71Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPV VAV+LF+LLTPGLL Q+P + R+VEFGN QTSG SILVH+I++F LI IF +A+ +H+Y G+
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

AT5G08391.1 Protein of unknown function (DUF 3339)1.0e-2365.22Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMG
        M+DWGPV V V+LF++LTPGLL Q+PG+ + VEFGNFQTS VS++VHS+LYF+L+C+FLLA+ +H+Y+G
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMG

AT5G40980.1 Protein of unknown function (DUF 3339)1.7e-1857.58Show/hide
Query:  ADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVY
        ADWGPV VAV LF+LL+PGLL Q+P + R++EFGN  TSG+SILVH+I+YF ++ I ++A+ +H++
Subjt:  ADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVY

AT5G63500.1 Protein of unknown function (DUF 3339)1.0e-2063.77Show/hide
Query:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMG
        MADWGPV +AV+LF++L+PGLL Q+P   R+VEFGN QTSG SILVH+I++F LI IF +A+ VH+Y G
Subjt:  MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGTCCGGTTTTCGTGGCGGTTGTGCTCTTCCTTCTTCTAACTCCTGGGTTGCTGGTTCAGATGCCAGGCAAGAACCGGCTGGTCGAATTTGGGAATTT
TCAGACCAGTGGAGTCTCTATTCTGGTTCATTCCATTCTCTATTTTGCCTTAATTTGTATCTTCTTGTTGGCTGTTGGTGTTCATGTTTATATGGGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
GAGTAATTAGTGTTTTATTTTTTTTAAGGTTAATTTAGTCATTATAAAAATATATGAGGGTAAATTGAATTAATATAGAAATTGAATTAAAATTCCAAAGCAATAGACAA
AAATAATATAGAAATTAAAGAAAAAAAATGTGAATCTGAATGACTTGATTCACTAAGCAAACTTGAGCTTTCCAAGTCATCCATCCACCATTCCTTTGTCCTTTTCTTCA
CCCCTATAACACCCTTCCAATGCTTTAATTCTCTTCCTCATCTTCCTCATTTCCTTCACCCACAATAACAATGGCGGATTGGGGTCCGGTTTTCGTGGCGGTTGTGCTCT
TCCTTCTTCTAACTCCTGGGTTGCTGGTTCAGATGCCAGGCAAGAACCGGCTGGTCGAATTTGGGAATTTTCAGACCAGTGGAGTCTCTATTCTGGTTCATTCCATTCTC
TATTTTGCCTTAATTTGTATCTTCTTGTTGGCTGTTGGTGTTCATGTTTATATGGGCTCTTAATTTCTTCTCTCCTCTCCTAATCCCTGTTCTTCTCTTTACTACTTTTC
TTTCATCTTCATTTTCTTACTTAACTATATACTTTCCTTTTATTATTTCTTAAATCTCTTCCACAGAATCATTCTCTCAACTTTCTTCTCTGTTTTTCAGGAATTTGATT
CCTCATATATATATCCATCAATCTCAACTATTCCACTAAACATTTAGAACCATAAAGGAATGGACCCAAAATTATAATAATAATAATAATAAACCTATCAATTTAAAGGC
ACGTTTACCTGGGTGAACGCTAACCTAAAAATTAGGCTTCATTTGATTTGATTTTTTTAGAGTTGTTTACTTTGTATTCTGCATCCACTTGTACATTGTCCACTCCAAAA
TATGTACCCAAAAATATAAACTGATTGATGAGCCAAAATGCTTAACTCAATTATATTTGAAAATTACGTTGTAGTGTTATCGTTATCGTTTGAAATAAAAAGTTTTTATT
ATCGTTA
Protein sequenceShow/hide protein sequence
MADWGPVFVAVVLFLLLTPGLLVQMPGKNRLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS