; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G08190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G08190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:7992448..7993813
RNA-Seq ExpressionClc11G08190
SyntenyClc11G08190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER47504.1 hypothetical protein STAS_24622 [Striga asiatica]2.3e-0857.63Show/hide
Query:  TGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        TGSA VD+D++ E+E+S+E EEDERV  +SLAVG HA EL+L ++PR L+++P  +QYE
Subjt:  TGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

KAA0056546.1 hypothetical protein E6C27_scaffold288G00480 [Cucumis melo var. makuwa]1.6e-1777.61Show/hide
Query:  EERREEEVTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        EER+EEEVTGSASVD+DMESENE+SIE+EEDE VYS+S +VG HAPELKL IIP KL++KP R+QYE
Subjt:  EERREEEVTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

KAE8652261.1 hypothetical protein Csa_022581 [Cucumis sativus]4.9e-1171.43Show/hide
Query:  ASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        ASVD+DMESENEDSIE+EEDE VYS+S ++G HAP+LKL II RKL++K  R+QYE
Subjt:  ASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

KAG6578364.1 hypothetical protein SDJN03_22812, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1265Show/hide
Query:  VTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        V   AS+D+D ESENED ++++E+ERV  D L+VG H P+LKL IIPRKLE+KPWREQYE
Subjt:  VTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

KAG6602686.1 Actin-related protein 2/3 complex subunit 2A, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1568.66Show/hide
Query:  EERREEEVTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        EE REEEVTGS+ VD+DM+SENED IE+EEDE +   S  V  H PELKLPIIPR+LE+KPWR+Q+E
Subjt:  EERREEEVTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

TrEMBL top hitse value%identityAlignment
A0A0A0LT04 Uncharacterized protein1.5e-0870Show/hide
Query:  MESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        MESENEDSIE+EEDE VYS+S ++G HAP+LKL II RKL++K  R+QYE
Subjt:  MESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

A0A0B2R840 Uncharacterized protein1.6e-0759.32Show/hide
Query:  TGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        TGSA VDMD   E+ED +E EEDERV  +  AVG HA ELKL  +PRK E++P  EQ+E
Subjt:  TGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

A0A445GEX9 Uncharacterized protein1.6e-0759.32Show/hide
Query:  TGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        TGSA VDMD   E+ED +E EEDERV  +  AVG HA ELKL  +PRK E++P  EQ+E
Subjt:  TGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

A0A5A7QQI9 Uncharacterized protein1.1e-0857.63Show/hide
Query:  TGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        TGSA VD+D++ E+E+S+E EEDERV  +SLAVG HA EL+L ++PR L+++P  +QYE
Subjt:  TGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

A0A5D3BWV4 Uncharacterized protein7.7e-1877.61Show/hide
Query:  EERREEEVTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE
        EER+EEEVTGSASVD+DMESENE+SIE+EEDE VYS+S +VG HAPELKL IIP KL++KP R+QYE
Subjt:  EERREEEVTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATAAAGCAGATCCACTTCCATCAACCCATCACATACCTTTCCCTTGCTTATAAACCATTTTCTTCTTTGTCCCCAAGTTTGGCATCCCTTCAAACTCCTTCTTC
ATTAAGCAAATCAACACACTCATTCACTCCTTATAATCCCTCCTTTACTTTCAGAGATGAGTGCAGACTGGGGACCGGTTGTAGTGGCGGTGGCGCTGTTCATTCTCCTG
TCGCCGGGGCTGCTTTTTCAGTTGCCGGCGAGAATCAGGGTGGTGGAGTTTGGGAATATGAACACCAGTGGGATTGCCATTTTGGTACACGCCATCATATTCTTCTGCAT
ACTCACCATATTGATCATTGCAATTGGGAAGAGAGACGAGAAGAAGAGGTTACCGGATCAGCCAGTGTAGATATGGATATGGAGAGCGAGAATGAAGACAGCATAGAGAA
TGAAGAAGATGAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTTTTCATGCTCCCGAACTCAAACTGCCGATTATTCCCCGGAAACTGGAAGAGAAGCCCTGGAGAGAGC
AGTACGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCATAAAGCAGATCCACTTCCATCAACCCATCACATACCTTTCCCTTGCTTATAAACCATTTTCTTCTTTGTCCCCAAGTTTGGCATCCCTTCAAACTCCTTCTTC
ATTAAGCAAATCAACACACTCATTCACTCCTTATAATCCCTCCTTTACTTTCAGAGATGAGTGCAGACTGGGGACCGGTTGTAGTGGCGGTGGCGCTGTTCATTCTCCTG
TCGCCGGGGCTGCTTTTTCAGTTGCCGGCGAGAATCAGGGTGGTGGAGTTTGGGAATATGAACACCAGTGGGATTGCCATTTTGGTACACGCCATCATATTCTTCTGCAT
ACTCACCATATTGATCATTGCAATTGGGAAGAGAGACGAGAAGAAGAGGTTACCGGATCAGCCAGTGTAGATATGGATATGGAGAGCGAGAATGAAGACAGCATAGAGAA
TGAAGAAGATGAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTTTTCATGCTCCCGAACTCAAACTGCCGATTATTCCCCGGAAACTGGAAGAGAAGCCCTGGAGAGAGC
AGTACGAATAG
Protein sequenceShow/hide protein sequence
MFIKQIHFHQPITYLSLAYKPFSSLSPSLASLQTPSSLSKSTHSFTPYNPSFTFRDECRLGTGCSGGGAVHSPVAGAAFSVAGENQGGGVWEYEHQWDCHFGTRHHILLH
THHIDHCNWEERREEEVTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQYE