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Clc11G08200 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G08200
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein of unknown function (DUF 3339)
Genome locationClcChr11:7999805..8001127
RNA-Seq ExpressionClc11G08200
SyntenyClc11G08200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441320.1 PREDICTED: uncharacterized protein LOC103485470 [Cucumis melo]3.6e-2491.3Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        MGDWGPVLIAVILFVVLSPGVLFQLPG +RVV+FVN+QTSAISVFVH+II+FGLITIFVIAIGVHISSG
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

XP_011649952.1 uncharacterized protein LOC101212375 [Cucumis sativus]4.4e-2285.51Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        MGDW PVLIAVILFVVLSPGVLFQLPG +RVV+F+N+QTSAISVFVH+I +FGLITIFVIAI VHISSG
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

XP_022134280.1 uncharacterized protein LOC111006581 [Momordica charantia]1.5e-2285.51Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        M DWGPVLIAV+LFVVLSPGVLFQLPGK RVVEFVNL+TSAISVFVH +I+FGLITIF+IAIGVHI++G
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

XP_037491426.1 uncharacterized protein LOC105632430 [Jatropha curcas]1.7e-2181.16Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        M DWGPV+IAV+LFVVLSPGVLFQLPGK+RVVEFVN+QTS +SV VH II+FGLITIF+IAIGVHI++G
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

XP_038886424.1 uncharacterized protein LOC120076617 [Benincasa hispida]6.8e-2385.51Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        MGDWGPV+IAV+LFV+LSPGVLFQLPG NRVV+F+N+QTSAISVFVH II+FGLITIFVIAI VHISSG
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

TrEMBL top hitse value%identityAlignment
A0A0A0LMX4 Uncharacterized protein2.1e-2285.51Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        MGDW PVLIAVILFVVLSPGVLFQLPG +RVV+F+N+QTSAISVFVH+I +FGLITIFVIAI VHISSG
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

A0A1S3B351 uncharacterized protein LOC1034854701.8e-2491.3Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        MGDWGPVLIAVILFVVLSPGVLFQLPG +RVV+FVN+QTSAISVFVH+II+FGLITIFVIAIGVHISSG
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

A0A2C9U7J2 Uncharacterized protein3.1e-2178.26Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        M DWGPV++AV+LFVVLSPGVLFQLPGK RVVEF N+QTS  SVFVH II+FGLITIF+IAIG+HI++G
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

A0A6J1BXW3 uncharacterized protein LOC1110065817.4e-2385.51Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        M DWGPVLIAV+LFVVLSPGVLFQLPGK RVVEFVNL+TSAISVFVH +I+FGLITIF+IAIGVHI++G
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

B9RBG4 Uncharacterized protein1.1e-2181.16Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        M DWGPV+IAV+LFVVLSPGVLFQLPG +RVVEF NLQTS +SVFVH II+FGLITIF+IAIGVHI++G
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)4.6e-1765.62Show/hide
Query:  DWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHI
        DWGPV +AV+LFVVLSPG+LFQLP + RV+E  N+ TS IS+ VHAI++F +ITI VIAI +HI
Subjt:  DWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHI

AT3G48660.1 Protein of unknown function (DUF 3339)5.8e-2066.67Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        M DWGPV++AVILFV+L+PG+LFQ+P + RVVEF N+QTS  S+ VH II+FGLITIF IAI +HI +G
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

AT5G08391.1 Protein of unknown function (DUF 3339)1.1e-1859.42Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        M DWGPVL+ VILFV+L+PG+LFQLPG+ + VEF N QTSA+SV VH+++YF L+ +F++A+ +HI  G
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

AT5G40980.1 Protein of unknown function (DUF 3339)1.6e-1764.06Show/hide
Query:  DWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHI
        DWGPV++AV LF++LSPG+LFQLP + RV+EF N+ TS IS+ VHAIIYF ++TI +IAI +HI
Subjt:  DWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHI

AT5G63500.1 Protein of unknown function (DUF 3339)4.7e-2276.81Show/hide
Query:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG
        M DWGPVLIAVILFVVLSPG+LFQ+P   RVVEF N+QTS  S+ VHAII+FGLITIF IAI VHI SG
Subjt:  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAATGGGAGACTCGATTACAAACTAGTGGGAACGCAAAGTGAGATGGAAACCAAGGAATGGAAAACAGTAGGAAGTGAAACTGATAACCCGAAACGGCCAAGAAT
TCCCATTTCATATTTATTTATACATAAACCTCTCGATTCCAAATCCCCATTAACATCAAATCAAAGCTGGGTTTGGAAAATGGGGGATTGGGGGCCTGTTCTAATAGCTG
TAATACTGTTCGTAGTTCTGAGCCCCGGAGTTCTGTTTCAGCTGCCCGGCAAAAACAGAGTTGTGGAGTTCGTCAATCTGCAAACCAGCGCCATCTCCGTTTTCGTCCAC
GCCATCATCTACTTTGGCCTCATTACTATCTTTGTCATCGCCATTGGGGTTCACATTTCCAGTGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAATGGGAGACTCGATTACAAACTAGTGGGAACGCAAAGTGAGATGGAAACCAAGGAATGGAAAACAGTAGGAAGTGAAACTGATAACCCGAAACGGCCAAGAAT
TCCCATTTCATATTTATTTATACATAAACCTCTCGATTCCAAATCCCCATTAACATCAAATCAAAGCTGGGTTTGGAAAATGGGGGATTGGGGGCCTGTTCTAATAGCTG
TAATACTGTTCGTAGTTCTGAGCCCCGGAGTTCTGTTTCAGCTGCCCGGCAAAAACAGAGTTGTGGAGTTCGTCAATCTGCAAACCAGCGCCATCTCCGTTTTCGTCCAC
GCCATCATCTACTTTGGCCTCATTACTATCTTTGTCATCGCCATTGGGGTTCACATTTCCAGTGGCTAA
Protein sequenceShow/hide protein sequence
MRNGRLDYKLVGTQSEMETKEWKTVGSETDNPKRPRIPISYLFIHKPLDSKSPLTSNQSWVWKMGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVH
AIIYFGLITIFVIAIGVHISSG