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Clc11G08210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G08210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:8000882..8002456
RNA-Seq ExpressionClc11G08210
SyntenyClc11G08210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056544.1 hypothetical protein E6C27_scaffold288G00460 [Cucumis melo var. makuwa]1.4e-3674.77Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA----------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSV
        MDSRCRARGLVKGM+GPLHGEAM GSRK   +TSNAS CSSH+SF VHHQER           VHDQ MNNVHEA  WNLYGV VDEHID KA +YISSV
Subjt:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA----------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSV

Query:  QERFKLEGLSN
        QERFKLEGL N
Subjt:  QERFKLEGLSN

KAE8652260.1 hypothetical protein Csa_022307 [Cucumis sativus]2.1e-3275.24Show/hide
Query:  ARGLVKGMLGPLHGEAMAGSR-KTTTSTSNASSCSSHVSFMVHHQERA---------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKL
        ARGLVKGM+GPLHGEAM GSR K T +TSNAS CSSH+SF VHHQERA         VHDQ MNNVHEA  WNLYGV VDEHID KA++YISSVQERFKL
Subjt:  ARGLVKGMLGPLHGEAMAGSR-KTTTSTSNASSCSSHVSFMVHHQERA---------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKL

Query:  EGLSN
        EGL N
Subjt:  EGLSN

KAG6578363.1 hypothetical protein SDJN03_22811, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2565.18Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA---------VHDQTMNNVHEANFWNLY--GVVVDEHIDWKATMYISS
        MD+RCRARGLVKGMLGPLHGE MA             SCSSHVSFMVH QERA         VHDQ MNNV EANF N    G   DEHID KA MYISS
Subjt:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA---------VHDQTMNNVHEANFWNLY--GVVVDEHIDWKATMYISS

Query:  VQERFKLEGLSN
        VQERF+LEGL N
Subjt:  VQERFKLEGLSN

KAG6602687.1 hypothetical protein SDJN03_07920, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2366.36Show/hide
Query:  MDSRCR-ARGLVKGMLGPLHGEAMAGSRKT--TTSTSNASSCSSHVSFMVHHQERA---------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYIS
        MDSRCR AR LV       HGEAMA SR T  T +  NASSCS HVSFMVHHQERA         VH+    NVHEA FWN YGVVVDEHID KA MYIS
Subjt:  MDSRCR-ARGLVKGMLGPLHGEAMAGSRKT--TTSTSNASSCSSHVSFMVHHQERA---------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYIS

Query:  SVQERFKLEG
        SVQERF+LEG
Subjt:  SVQERFKLEG

PON95398.1 hypothetical protein TorRG33x02_089200 [Trema orientale]1.3e-0536.13Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTST--------SNASSCSSHVSFMVHHQ----------ERAVHDQTMNNVHEANFWNLYGVVVDEHIDWK
        M+S  + RG +KG L P +  A   S  TTT+         S +S  ++ V F+VH               +  ++ ++V + +  NLYGV VDE +D K
Subjt:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTST--------SNASSCSSHVSFMVHHQ----------ERAVHDQTMNNVHEANFWNLYGVVVDEHIDWK

Query:  ATMYISSVQERFKLEGLSN
        A  YISSVQERFKLE +++
Subjt:  ATMYISSVQERFKLEGLSN

TrEMBL top hitse value%identityAlignment
A0A0A0LQT5 Uncharacterized protein8.9e-3776.58Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMAGSR-KTTTSTSNASSCSSHVSFMVHHQERA---------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSV
        MDSRCRARGLVKGM+GPLHGEAM GSR K T +TSNAS CSSH+SF VHHQERA         VHDQ MNNVHEA  WNLYGV VDEHID KA++YISSV
Subjt:  MDSRCRARGLVKGMLGPLHGEAMAGSR-KTTTSTSNASSCSSHVSFMVHHQERA---------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSV

Query:  QERFKLEGLSN
        QERFKLEGL N
Subjt:  QERFKLEGLSN

A0A2P5FC89 Uncharacterized protein6.3e-0636.13Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTST--------SNASSCSSHVSFMVHHQ----------ERAVHDQTMNNVHEANFWNLYGVVVDEHIDWK
        M+S  + RG +KG L P +  A   S  TTT+         S +S  ++ V F+VH               +  ++ ++V + +  NLYGV VDE +D K
Subjt:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTST--------SNASSCSSHVSFMVHHQ----------ERAVHDQTMNNVHEANFWNLYGVVVDEHIDWK

Query:  ATMYISSVQERFKLEGLSN
        A  YISSVQERFKLE +++
Subjt:  ATMYISSVQERFKLEGLSN

A0A2P5W1Z7 Uncharacterized protein2.4e-0539.29Show/hide
Query:  MDSRCRARGLVKGMLGPLHG--EAMAGSRKTTTSTSN-ASSCSSHVSFMVHH-----QERAVH-----DQTMNNVHEANFWNLYGVVVDEHIDWKATMYI
        MDS  + RG +KG L PL+   +  AG + T  +  N  SS ++ V F VH      Q + +      D+   N+ + +  N +GVV DE +D KA  YI
Subjt:  MDSRCRARGLVKGMLGPLHG--EAMAGSRKTTTSTSN-ASSCSSHVSFMVHH-----QERAVH-----DQTMNNVHEANFWNLYGVVVDEHIDWKATMYI

Query:  SSVQERFKLEGL
        SSV+ERFKLE L
Subjt:  SSVQERFKLEGL

A0A5A7UMY1 Uncharacterized protein6.8e-3774.77Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA----------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSV
        MDSRCRARGLVKGM+GPLHGEAM GSRK   +TSNAS CSSH+SF VHHQER           VHDQ MNNVHEA  WNLYGV VDEHID KA +YISSV
Subjt:  MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA----------VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSV

Query:  QERFKLEGLSN
        QERFKLEGL N
Subjt:  QERFKLEGLSN

A0A5D2Q0G2 Uncharacterized protein2.4e-0539.29Show/hide
Query:  MDSRCRARGLVKGMLGPLHG--EAMAGSRKTTTSTSN-ASSCSSHVSFMVHH-----QERAVH-----DQTMNNVHEANFWNLYGVVVDEHIDWKATMYI
        MDS  + RG +KG L PL+   +  AG + T  +  N  SS ++ V F VH      Q + +      D+   N+ + +  N +GVV DE +D KA  YI
Subjt:  MDSRCRARGLVKGMLGPLHG--EAMAGSRKTTTSTSN-ASSCSSHVSFMVHH-----QERAVH-----DQTMNNVHEANFWNLYGVVVDEHIDWKATMYI

Query:  SSVQERFKLEGL
        SSV+ERFKLE L
Subjt:  SSVQERFKLEGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAAGATGTAGAGCAAGAGGCCTTGTGAAGGGCATGTTGGGTCCTCTCCATGGGGAAGCTATGGCTGGCAGTAGAAAGACGACGACAAGCACGTCAAACGCTTC
GTCGTGTTCGAGTCATGTTTCGTTTATGGTTCATCACCAAGAAAGAGCGGTTCATGATCAAACCATGAATAATGTTCACGAGGCGAACTTTTGGAACCTTTACGGCGTCG
TTGTGGATGAACATATCGATTGGAAGGCCACCATGTACATATCATCAGTGCAAGAACGCTTTAAACTTGAGGGCTTAAGCAATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAGAAAAGAAATTTGCACAAGAACCAAACAAAGATGGATTCAAGATGTAGAGCAAGAGGCCTTGTGAAGGGCATGTTGGGTCCTCTCCATGGGGAAGCTAT
GGCTGGCAGTAGAAAGACGACGACAAGCACGTCAAACGCTTCGTCGTGTTCGAGTCATGTTTCGTTTATGGTTCATCACCAAGAAAGAGCGGTTCATGATCAAACCATGA
ATAATGTTCACGAGGCGAACTTTTGGAACCTTTACGGCGTCGTTGTGGATGAACATATCGATTGGAAGGCCACCATGTACATATCATCAGTGCAAGAACGCTTTAAACTT
GAGGGCTTAAGCAATTGATATATGAGGCAAAAGGGATCAGCAATGAAATTACTGTCTTCATTGGTTGCAAGTGTTTGTAAATACTAATAATTTTCATCTGTCTTAACGAT
GCTAAAAATGATTAATAGAAATGTATAAAATATAGCTACGTACTTTACACCTTGAAGGATTGTTTAATCTATTCAAGATATTAAATATGTTTGAGTTAAGAATCTGAAAC
CATAGACTCAATTATTGACACTTTATTCTGCTGCCTTTTTTCTTTTCTTCAAAAGAGATTTAATTAGGTGGCAACTGCAAGAGTAACCATCAATGTTTCAGATAGATTAA
ATATTAACTTCCAAGACTGATTGACCAATGTGGAATCATTTGAGTCTGTTGTTACATTTTTTTTTTTTTCTGAGTTTCTTTTATAGAGATTAATGTTTTTTTCTTAGTTT
TCTATGGAAGAGCACTGTAGTGGCAAGAAAGATTTAAAGATCATATATCTATTAATTAGTGTTCTTAGTCGTGGAGTTTTGAGCTAAAACATTTGTTTTGTTGTGTTCTG
TGCGGGACAAACCAGAAAATATTGCTTCACCGGTGAGTAATACAAAAAAATACAGTAGACCCTGCAAATGACTTAAATCTTCCTAAGAGAGATATTCGCACCTCAACCTA
CTTGTTTATGCAGTAATTTTCCAACAGATTTGATCTGATATTTATATAAATGTACATCAGCAAAGTTTGAAGGTTAAAATAGAACTTTATATGGTTACTTGGCACTGTGA
GCAAGAATGTAGAACAATAATTGACTCCCATTGAAGCCCAACTAACGTGTATTGCTCTATTTGAACATGATGAAATATGAAACTTGGTTGAGAATATAGGATTGCGATAA
GGGAAAGAGAAGTTTAAAAAGAACAGAGAGGCAGTAAGAATAAAAACCAGAGGATGTAAAGAAAACAGAGAGAAGAGAGAAGGTTAAAGAAAGAAGAAAAAAAAGGGGGG
ATTTTGGTTTTAGCCACTGGAAATGTGAACCCCAATGGCGATGACAAAGATAGTAATGAGGCCAAAGTAGATGATGGCGTGGACGAAAACGGAGATGGCGCTGGTTTGCA
GATTGACGAACTCCACAACTCTGTTTTTGCCGGGCAGCTGAAACAGAACTCCGGGGCTCAGAACTACGAACAGTATTACAGCTATTAGAACAGGCCCCCAATCCCCCATT
TTCCAAACCCAGCTTTGATTTGATGTTAATGGGGA
Protein sequenceShow/hide protein sequence
MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERAVHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGLSN