; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G08220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G08220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionWRKY domain-containing protein
Genome locationClcChr11:8020637..8022100
RNA-Seq ExpressionClc11G08220
SyntenyClc11G08220
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006817 - phosphate ion transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR003657 - WRKY domain
IPR036576 - WRKY domain superfamily
IPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK41918.1 unknown [Lotus japonicus]2.5e-4260.39Show/hide
Query:  DNNYQIFFPASS-------SSHNSLPTTPMDHQFQEE--------SSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRS
        +NNY + FP  S       SSHN       DHQF++          S    S    K EKK RK R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRS
Subjt:  DNNYQIFFPASS-------SSHNSLPTTPMDHQFQEE--------SSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRS

Query:  YYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY
        YY+C+H GC VKKQ+QRLT DEGVV+TTYEGVH+HPIE   DNF+HIL  MQIY
Subjt:  YYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY

TYK02720.1 putative WRKY transcription factor 43 [Cucumis melo var. makuwa]2.9e-4376.86Show/hide
Query:  DHQFQEESSVKKTS---SGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSH
        D + +EESS+KK     SG    +KK RK RFAFETRSQVDVLDDGYRWRKYGQKAVKN+KFPRSYYKCS++GCKVKKQIQRLT DE VVLTTYEGVHSH
Subjt:  DHQFQEESSVKKTS---SGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSH

Query:  PIETPQDNFQHILTHMQIYPS
        PIE P D+FQ+ILTHM IY S
Subjt:  PIETPQDNFQHILTHMQIYPS

XP_004138624.3 probable WRKY transcription factor 75 [Cucumis sativus]1.2e-5275.33Show/hide
Query:  MDNNYQIFFPASSSS--HNSLP-TTPMDHQFQEESSVKKT----SSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQ
        MDN+Y+ FFP SSSS  HNSL      D + +EE S+KK     S G +K +KKIRK RFAFETRSQVDVLDDGYRWRKYGQKAVKN+KFPRSYYKCS++
Subjt:  MDNNYQIFFPASSSS--HNSLP-TTPMDHQFQEESSVKKT----SSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQ

Query:  GCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSS
        GCKVKKQIQRLTNDEGVVLTTYEGVHSHPIE P D+FQ+ILTHM IYPSS
Subjt:  GCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSS

XP_012085719.1 probable WRKY transcription factor 75 [Jatropha curcas]4.2e-4277.27Show/hide
Query:  KKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHIL
        KK SS S K EKKI+K R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+HQGC VKKQ+QRLT DEG+V+TTYEG+HSHPIE   DNF+HIL
Subjt:  KKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHIL

Query:  THMQIYPSSF
        T MQIY +SF
Subjt:  THMQIYPSSF

XP_038886504.1 probable WRKY transcription factor 75 [Benincasa hispida]2.1e-6284.21Show/hide
Query:  MDNNYQIFFP-ASSSSHNSLPTTPMDHQF-------QEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSH
        MDNNYQIFFP  SSSSHNSLP TPMDHQ        +EESS+KKT +G MKS+ KIRK RFAFETRSQVDVLDDGYRWRKYGQKAVKN+KFPRSYYKCSH
Subjt:  MDNNYQIFFP-ASSSSHNSLPTTPMDHQF-------QEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSH

Query:  QGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF
        +GCKVKKQIQRLTNDEG+VLTTYEGVHSHPIE PQDNFQHILTHMQIY SSF
Subjt:  QGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF

TrEMBL top hitse value%identityAlignment
A0A068UY66 WRKY domain-containing protein2.7e-4275.23Show/hide
Query:  KTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILT
        +  SG  K++KKIRK R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+HQGC VKKQ+QRL+ DEGVV+TTYEG+HSHPIE   DNF+HILT
Subjt:  KTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILT

Query:  HMQIYPSSF
         MQIY +SF
Subjt:  HMQIYPSSF

A0A0A0LT01 WRKY domain-containing protein9.4e-4879.67Show/hide
Query:  DHQFQEESSVKKT----SSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHS
        D + +EE S+KK     S G +K +KKIRK RFAFETRSQVDVLDDGYRWRKYGQKAVKN+KFPRSYYKCS++GCKVKKQIQRLTNDEGVVLTTYEGVHS
Subjt:  DHQFQEESSVKKT----SSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHS

Query:  HPIETPQDNFQHILTHMQIYPSS
        HPIE P D+FQ+ILTHM IYPSS
Subjt:  HPIETPQDNFQHILTHMQIYPSS

A0A5D3BUB7 Putative WRKY transcription factor 431.4e-4376.86Show/hide
Query:  DHQFQEESSVKKTS---SGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSH
        D + +EESS+KK     SG    +KK RK RFAFETRSQVDVLDDGYRWRKYGQKAVKN+KFPRSYYKCS++GCKVKKQIQRLT DE VVLTTYEGVHSH
Subjt:  DHQFQEESSVKKTS---SGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSH

Query:  PIETPQDNFQHILTHMQIYPS
        PIE P D+FQ+ILTHM IY S
Subjt:  PIETPQDNFQHILTHMQIYPS

I3SNS6 WRKY domain-containing protein1.2e-4260.39Show/hide
Query:  DNNYQIFFPASS-------SSHNSLPTTPMDHQFQEE--------SSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRS
        +NNY + FP  S       SSHN       DHQF++          S    S    K EKK RK R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRS
Subjt:  DNNYQIFFPASS-------SSHNSLPTTPMDHQFQEE--------SSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRS

Query:  YYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY
        YY+C+H GC VKKQ+QRLT DEGVV+TTYEGVH+HPIE   DNF+HIL  MQIY
Subjt:  YYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY

S5CKE7 WRKY transcription factor 172.0e-4277.27Show/hide
Query:  KKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHIL
        KK SS S K EKKI+K R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+HQGC VKKQ+QRLT DEG+V+TTYEG+HSHPIE   DNF+HIL
Subjt:  KKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHIL

Query:  THMQIYPSSF
        T MQIY +SF
Subjt:  THMQIYPSSF

SwissProt top hitse value%identityAlignment
Q8VWQ4 Probable WRKY transcription factor 565.7e-2656.25Show/hide
Query:  KSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQ
        K ++ +   R AF TRS  DVLDDGYRWRKYGQK+VKN+  PRSYY+C++  C VKKQ+QRL  D  VV+TTYEGVH+HP E   +    +L  +Q
Subjt:  KSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQ

Q93WV4 WRKY transcription factor 713.4e-2653.21Show/hide
Query:  ESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDN-
        ESS + T  G  K EKK R+ R AF T+S++D L+DGYRWRKYGQKAVKN  +PRSYY+C+ Q C VKK+++R   D  +V+TTYEG H+HPI +     
Subjt:  ESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDN-

Query:  --FQHILTH
           +H+L H
Subjt:  --FQHILTH

Q9FGZ4 Probable WRKY transcription factor 482.6e-2656.25Show/hide
Query:  QFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHP
        Q QE+   K       K++KK R+ RFAF T+S +D LDDGYRWRKYGQKAVKN  +PRSYY+C+  GC VKK+++R ++D  +V+TTYEG H+HP
Subjt:  QFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHP

Q9FYA2 Probable WRKY transcription factor 754.1e-4061.81Show/hide
Query:  NNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMK----SEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVK
        +N  ++ P  S   +S P     HQ +EESS K  S G  K    S+KK +K R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C++ GC VK
Subjt:  NNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMK----SEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVK

Query:  KQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPS
        KQ+QRLT D+ VV+TTYEGVHSHPIE   +NF+HILT MQIY S
Subjt:  KQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPS

Q9S763 Probable WRKY transcription factor 458.5e-3856.03Show/hide
Query:  DNNYQIFFPASSSSHNSLPT-TPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQ
        D    + FP SSS    L     +D+  Q  +S ++      K +KK R+ R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+ FPRSYYKC+ +GC+VKKQ
Subjt:  DNNYQIFFPASSSSHNSLPT-TPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQ

Query:  IQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYP
        +QR   DEGVV+TTY+GVH+H ++ P DNF HILT M I+P
Subjt:  IQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYP

Arabidopsis top hitse value%identityAlignment
AT1G29860.1 WRKY DNA-binding protein 712.4e-2753.21Show/hide
Query:  ESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDN-
        ESS + T  G  K EKK R+ R AF T+S++D L+DGYRWRKYGQKAVKN  +PRSYY+C+ Q C VKK+++R   D  +V+TTYEG H+HPI +     
Subjt:  ESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDN-

Query:  --FQHILTH
           +H+L H
Subjt:  --FQHILTH

AT1G64000.1 WRKY DNA-binding protein 564.1e-2756.25Show/hide
Query:  KSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQ
        K ++ +   R AF TRS  DVLDDGYRWRKYGQK+VKN+  PRSYY+C++  C VKKQ+QRL  D  VV+TTYEGVH+HP E   +    +L  +Q
Subjt:  KSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQ

AT3G01970.1 WRKY DNA-binding protein 456.0e-3956.03Show/hide
Query:  DNNYQIFFPASSSSHNSLPT-TPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQ
        D    + FP SSS    L     +D+  Q  +S ++      K +KK R+ R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+ FPRSYYKC+ +GC+VKKQ
Subjt:  DNNYQIFFPASSSSHNSLPT-TPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQ

Query:  IQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYP
        +QR   DEGVV+TTY+GVH+H ++ P DNF HILT M I+P
Subjt:  IQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYP

AT5G13080.1 WRKY DNA-binding protein 752.9e-4161.81Show/hide
Query:  NNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMK----SEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVK
        +N  ++ P  S   +S P     HQ +EESS K  S G  K    S+KK +K R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C++ GC VK
Subjt:  NNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMK----SEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVK

Query:  KQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPS
        KQ+QRLT D+ VV+TTYEGVHSHPIE   +NF+HILT MQIY S
Subjt:  KQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPS

AT5G49520.1 WRKY DNA-binding protein 481.8e-2756.25Show/hide
Query:  QFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHP
        Q QE+   K       K++KK R+ RFAF T+S +D LDDGYRWRKYGQKAVKN  +PRSYY+C+  GC VKK+++R ++D  +V+TTYEG H+HP
Subjt:  QFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATAATTACCAAATATTCTTCCCAGCTTCCTCCTCCTCCCATAATTCACTGCCAACTACGCCCATGGATCATCAGTTCCAAGAAGAAAGTAGTGTGAAAAAAAC
AAGTAGTGGATCTATGAAATCGGAGAAGAAGATAAGAAAAGGGAGATTTGCGTTTGAAACCAGGAGCCAAGTTGATGTGCTTGACGATGGCTATCGCTGGAGAAAATATG
GTCAAAAGGCTGTTAAGAACGACAAGTTTCCCAGGAGCTACTATAAGTGTTCACATCAAGGATGTAAAGTGAAGAAGCAAATTCAACGGCTTACAAATGATGAAGGAGTG
GTATTAACAACCTACGAAGGAGTTCATTCCCATCCCATCGAAACCCCTCAAGATAACTTTCAACATATCTTGACTCACATGCAAATTTACCCTTCTTCCTTTTAA
mRNA sequenceShow/hide mRNA sequence
GAATATTTGGTATTTTTGGTGCCGTACACGACACAGCCAACTTTCATATATATTAATTCATGGATTCAGCCTAAGCCTAACTCCAAATTAAGCCCTCCCTCAGATAATTA
TGGATAATAATTACCAAATATTCTTCCCAGCTTCCTCCTCCTCCCATAATTCACTGCCAACTACGCCCATGGATCATCAGTTCCAAGAAGAAAGTAGTGTGAAAAAAACA
AGTAGTGGATCTATGAAATCGGAGAAGAAGATAAGAAAAGGGAGATTTGCGTTTGAAACCAGGAGCCAAGTTGATGTGCTTGACGATGGCTATCGCTGGAGAAAATATGG
TCAAAAGGCTGTTAAGAACGACAAGTTTCCCAGGAGCTACTATAAGTGTTCACATCAAGGATGTAAAGTGAAGAAGCAAATTCAACGGCTTACAAATGATGAAGGAGTGG
TATTAACAACCTACGAAGGAGTTCATTCCCATCCCATCGAAACCCCTCAAGATAACTTTCAACATATCTTGACTCACATGCAAATTTACCCTTCTTCCTTTTAAAACCTC
TATTTCACTTTAATTTCTTTTTTGCTTTTTTCACATTACACTTTTCAATTTTTATTATCAACTTCAATACCTCATTTCTTTGTCTATATAATAAGCCCTTTGCTTTTGTA
TTTTAAATACACATTTCCATTTTTGTATTGTTTATTATGGAGTAATTGTTTTTAATGGCAAAAATGTTAAAATTATTTTGAG
Protein sequenceShow/hide protein sequence
MDNNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGV
VLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF