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Clc11G08450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G08450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationClcChr11:9461809..9463558
RNA-Seq ExpressionClc11G08450
SyntenyClc11G08450
Gene Ontology termsGO:0008757 - S-adenosylmethionine-dependent methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK01565.1 hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa]8.9e-2350.96Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        S+VL +L++ L+ N  ++GF +GKDKIHVP+LQF D TL+FC ++   ++ LR+ ++F+EWC GQKVNW+KSALCGINV E ++ S A+ L  K   LP+
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGG
        +  G
Subjt:  MQGG

TYK02777.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]4.0e-2354.81Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        SEVL  ++++L+ N +F+GF VGKD IH+PLLQFA+DTL+FCK++ + L  L+  I  +EWC GQKVN EKSAL G+NV E  +   A+LL CKA  LPI
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGG
        +  G
Subjt:  MQGG

TYK31266.1 hypothetical protein E5676_scaffold455G005560 [Cucumis melo var. makuwa]6.1e-2451.92Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        SEVL  ++++L+ N +F+GF VGKD IH+PLLQF++DTL+FCK++ +    L+  I  +EWC GQKVNWEKSA+ G+NV++  +   A+LLGCK   LPI
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGG
        +  G
Subjt:  MQGG

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]1.1e-2555.77Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        SEVL+ L+ RL+E  K++GF VGKDK+H+ ++QF  DTL+FCK+ DE +E LR  I  +EWC  QKVNWEKSA+CGIN++E K+ S A+ L CK   LP+
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGG
        M  G
Subjt:  MQGG

XP_038889274.1 uncharacterized protein LOC120079176 [Benincasa hispida]3.6e-2445.93Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        SEVL++L+++L +    +GF VGKDKI + +LQFAD TL+FCK++   L  L++ + F++WC GQKVNWEKSAL GINVDE ++ S A+ L CKA  LP 
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGGCESKKPLAEY---FMFVAEVANHWDSSTNSW
           G     PL  Y     F   V N++ +  + W
Subjt:  MQGGCESKKPLAEY---FMFVAEVANHWDSSTNSW

TrEMBL top hitse value%identityAlignment
A0A5A7T8L2 Reverse transcriptase domain-containing protein2.4e-2146.79Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        SEVL +++++LY N  F+GF VGK+ +H+P+L++ADDT++F K+++  L  L++ I   EWC  QKVNW+KSAL G+NV E  +   A  LG KA  LP 
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGGCESKK
        +  G  S K
Subjt:  MQGGCESKK

A0A5D3BQV1 Reverse transcriptase domain-containing protein4.3e-2350.96Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        S+VL +L++ L+ N  ++GF +GKDKIHVP+LQF D TL+FC ++   ++ LR+ ++F+EWC GQKVNW+KSALCGINV E ++ S A+ L  K   LP+
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGG
        +  G
Subjt:  MQGG

A0A5D3BTI0 Transposon TX1 uncharacterized1.9e-2354.81Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        SEVL  ++++L+ N +F+GF VGKD IH+PLLQFA+DTL+FCK++ + L  L+  I  +EWC GQKVN EKSAL G+NV E  +   A+LL CKA  LPI
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGG
        +  G
Subjt:  MQGG

A0A5D3DC03 Uncharacterized protein2.0e-2043.81Show/hide
Query:  DSEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALP
        D EV  +LL++L  +  ++G  VGK+++H+P+LQFADDTL+F K+++  L  L+  I  +EWC G ++NWEKSALCG+N++E ++   A  +GC A  +P
Subjt:  DSEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALP

Query:  IMQGG
         +  G
Subjt:  IMQGG

A0A5D3E6J9 Reverse transcriptase domain-containing protein3.0e-2451.92Show/hide
Query:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI
        SEVL  ++++L+ N +F+GF VGKD IH+PLLQF++DTL+FCK++ +    L+  I  +EWC GQKVNWEKSA+ G+NV++  +   A+LLGCK   LPI
Subjt:  SEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGINVDEGKVHSAASLLGCKAGALPI

Query:  MQGG
        +  G
Subjt:  MQGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAAAGATTAAGTGTCTCAAATGCTATTTCTTCCAAACCTCCAAAGTGGGAGCCGATAGCTTCAAAGGTGGCTCTGTTCCAGTATTCCAACGACAGTGAAGTCCT
GACCAGCTTACTTGATAGACTTTATGAAAACAAGAAGTTCAAAGGTTTTAAAGTGGGGAAAGATAAAATCCACGTTCCATTGCTACAATTTGCTGATGATACCTTAATCT
TTTGCAAATTCGAAGATGAATCACTTGAATTCCTTAGGAAGATTATAAATTTTTATGAATGGTGCTTGGGACAGAAGGTTAATTGGGAGAAATCAGCCTTATGTGGCATT
AATGTCGATGAAGGAAAGGTACACTCTGCTGCCAGTTTGTTAGGCTGCAAAGCAGGGGCTTTACCTATCATGCAAGGAGGGTGTGAGTCTAAGAAGCCCTTGGCTGAGTA
TTTCATGTTTGTGGCTGAAGTTGCAAACCATTGGGATTCCTCTACCAATTCTTGGGCTATATCTTTTCGAAGACTTCTCAAGGAGAATGAGGTTGAAGATTTCCAAGATC
TTATGGGTATTTTTCGTGAAAAAGGAATATCCTCTTCTCAGGATAGAAGAGTTTGGTCGTTAGAGCCAAATGGACCTTACACGGTGAAGTCCCTTACCAAGCACCTATCT
TTGGCACACCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAAAGATTAAGTGTCTCAAATGCTATTTCTTCCAAACCTCCAAAGTGGGAGCCGATAGCTTCAAAGGTGGCTCTGTTCCAGTATTCCAACGACAGTGAAGTCCT
GACCAGCTTACTTGATAGACTTTATGAAAACAAGAAGTTCAAAGGTTTTAAAGTGGGGAAAGATAAAATCCACGTTCCATTGCTACAATTTGCTGATGATACCTTAATCT
TTTGCAAATTCGAAGATGAATCACTTGAATTCCTTAGGAAGATTATAAATTTTTATGAATGGTGCTTGGGACAGAAGGTTAATTGGGAGAAATCAGCCTTATGTGGCATT
AATGTCGATGAAGGAAAGGTACACTCTGCTGCCAGTTTGTTAGGCTGCAAAGCAGGGGCTTTACCTATCATGCAAGGAGGGTGTGAGTCTAAGAAGCCCTTGGCTGAGTA
TTTCATGTTTGTGGCTGAAGTTGCAAACCATTGGGATTCCTCTACCAATTCTTGGGCTATATCTTTTCGAAGACTTCTCAAGGAGAATGAGGTTGAAGATTTCCAAGATC
TTATGGGTATTTTTCGTGAAAAAGGAATATCCTCTTCTCAGGATAGAAGAGTTTGGTCGTTAGAGCCAAATGGACCTTACACGGTGAAGTCCCTTACCAAGCACCTATCT
TTGGCACACCAATAG
Protein sequenceShow/hide protein sequence
MFKRLSVSNAISSKPPKWEPIASKVALFQYSNDSEVLTSLLDRLYENKKFKGFKVGKDKIHVPLLQFADDTLIFCKFEDESLEFLRKIINFYEWCLGQKVNWEKSALCGI
NVDEGKVHSAASLLGCKAGALPIMQGGCESKKPLAEYFMFVAEVANHWDSSTNSWAISFRRLLKENEVEDFQDLMGIFREKGISSSQDRRVWSLEPNGPYTVKSLTKHLS
LAHQ