CuGenDBv2

Gene ID	Clc11G08800
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	DEAD-box ATP-dependent RNA helicase FANCM isoform X2
Genome location	ClcChr11:10653097..10667369
RNA-Seq Expression	Clc11G08800
Synteny	Clc11G08800
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0003677 - DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domains	IPR039686 - FANCM/Mph1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578303.1 DEAD-box ATP-dependent RNA helicase FANCM, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-232

72.92

Show/hide

Query:  GSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTTQ
        GSINEV+A K ELEGP+VYPEVSA PNP ENNC S YCS KHP                                         LLSS ELGS+ VRT Q
Subjt:  GSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTTQ

Query:  DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIES
        DLIV ++AV+E  TSQTK L +EVLPSPETD  TVLEDK +N IE+IHQST+   +FFN+ D  +EKPV  EIEPQFPP DECSI+ETQLSPRLTNLIES
Subjt:  DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIES

Query:  GFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAI
        GFVP+SPID+CGYSRQRI ES ISQ ILPVQVDG QLL SSSPGIN+RI+CN G HAGNDV L SGE RPSVLEDNDSVG+KSH  TSPVA+ET+TP AI
Subjt:  GFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAI

Query:  ISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGD
        I+S+CDNEDW+L +GEKSSSVQKPRKFKRLRKVGDV+KNEN +S +KTSVSP  NMVG FS++R +KKKKRDG+RRF+DNVRA+I+EEAEVSSDATISGD
Subjt:  ISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGD

Query:  -EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSP
         EDDKIKSSFDSFIDDR+SASATSTQDETG  DMMAIYRRSLLSQ  SPFGRLTSPLA +V ESE SP KTLN+FQ+TLTGNV+QSH++HSEH KM  SP
Subjt:  -EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSP

Query:  EVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKN
        EVVISTTG CP A EVESRNRN TFCASESVP +NLD+QFELVV GRE ISDV         DDEFYEGLDLDAVEAQAKLLLEKKVELP +MVTQ HKN
Subjt:  EVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKN

Query:  LHLDTSPSFDLGI
        L L TSPSFDLGI
Subjt:  LHLDTSPSFDLGI

KAG7015875.1 DEAD-box ATP-dependent RNA helicase FANCM, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.5e-233

72.8

Show/hide

Query:  AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTT
        + SINE++A K ELEGP+VYP+VSA PNP ENNC S YCS KHP                                         LLSS ELGS+ VRT+
Subjt:  AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTT

Query:  QDLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIE
         DLIV T+AV+E  TSQTK L +EVLPSPETD  TVLEDK +N IE+IHQST+   +FFN+ D  +EKPV  EIEPQFPP DECSIIETQLSPRLTNLIE
Subjt:  QDLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIE

Query:  SGFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLA
        SGFVP+SPID+CGYSRQRIYES ISQ ILPVQVDG QLL SSSPGIN+RI+CN G HAGNDV L SGE RPSVLEDNDSVG+KSH  TSPVA+ET+TP A
Subjt:  SGFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLA

Query:  IISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISG
        II+S+CDNEDW+L +GEK+SSVQKPRKFKRLRKVGDV+KNEN +S +KTSVSP  NMVG FS++R +KKKKRDG+RRF+DNVRA+I+EEAEVSSDATISG
Subjt:  IISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISG

Query:  D-EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCS
        D EDDKIKSSFDSFIDDR+SASATSTQDETG  DMMAIYRRSLLSQ  SPFGRLTSPLA +VTESE SP KTLN+FQ+TLTGNVDQSH++HSEH KM  S
Subjt:  D-EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCS

Query:  PEVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHK
        PEVVISTTG CP A EVESRNRN TFCASESVP +NLD+QFELVV GRE ISDV         DDEFYEGLDLDAVEAQAKLLLEKKVELP +MVTQ HK
Subjt:  PEVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHK

Query:  NLHLDTSPSFDLGI
        NL L TSPSFDLGI
Subjt:  NLHLDTSPSFDLGI

XP_008441145.1 PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis melo]

5.7e-237

75.38

Show/hide

Query:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL
        H +  S  F  A S NEVN +KAELE PLVYPEVS   N  ENNCIS  CSPKH           LLSSSE GSYCVRT QDLIVPT+AVNE  TSQTK+
Subjt:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL

Query:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQST---LSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY
        LPDE+ PSPETD V VLEDK MNLIE+ HQ+T    +FFNK D  +EK V  EIEPQF P DEC I ETQLSPRLTNLIESGFVP+SPIDDCGYSRQRI 
Subjt:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQST---LSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY

Query:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS
        ES  SQLILP QVDGLQLLNSSS GINE I+CNGGF AGN + L S EG+ S L+DN+SVGIKSH  TS VADE +TPLAII+S+CDNE WD   GEK S
Subjt:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS

Query:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA
        S+ KP KFKRLRKVGD+KKNEN++SM KTS+SP GNMVG FS+TRQ K+KKRDG+R+FDDNV+AFI+EEAEVSSDAT+SGDEDDKIKSSFDSFIDDR+SA
Subjt:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA

Query:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN
        SA+STQDET +PDMMAIYRRSLLSQ  SPFGRLTSPLA +VTESE SP KTLNIFQST+TG+V+QSH LHS+H KMNCSPEVVI+TTG+CPRA +VESRN
Subjt:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN

Query:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI
        RNSTFC SESVPV+NLDKQFELVV GRE IS+VD+NRN++IDDDEFYEGLDLDAVEA AKLLLEKKVELP  MVTQQ KN+ +D SPSFDLGI
Subjt:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI

XP_008441146.1 PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis melo]

5.7e-237

75.38

Show/hide

Query:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL
        H +  S  F  A S NEVN +KAELE PLVYPEVS   N  ENNCIS  CSPKH           LLSSSE GSYCVRT QDLIVPT+AVNE  TSQTK+
Subjt:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL

Query:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQST---LSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY
        LPDE+ PSPETD V VLEDK MNLIE+ HQ+T    +FFNK D  +EK V  EIEPQF P DEC I ETQLSPRLTNLIESGFVP+SPIDDCGYSRQRI 
Subjt:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQST---LSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY

Query:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS
        ES  SQLILP QVDGLQLLNSSS GINE I+CNGGF AGN + L S EG+ S L+DN+SVGIKSH  TS VADE +TPLAII+S+CDNE WD   GEK S
Subjt:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS

Query:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA
        S+ KP KFKRLRKVGD+KKNEN++SM KTS+SP GNMVG FS+TRQ K+KKRDG+R+FDDNV+AFI+EEAEVSSDAT+SGDEDDKIKSSFDSFIDDR+SA
Subjt:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA

Query:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN
        SA+STQDET +PDMMAIYRRSLLSQ  SPFGRLTSPLA +VTESE SP KTLNIFQST+TG+V+QSH LHS+H KMNCSPEVVI+TTG+CPRA +VESRN
Subjt:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN

Query:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI
        RNSTFC SESVPV+NLDKQFELVV GRE IS+VD+NRN++IDDDEFYEGLDLDAVEA AKLLLEKKVELP  MVTQQ KN+ +D SPSFDLGI
Subjt:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI

XP_022939320.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Cucurbita moschata]

6.5e-233

73.25

Show/hide

Query:  GSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTTQ
        GSINEV+A K ELEGP+VYPEVSA PNP ENNC S YCS KHP                                         LLSS ELGS+ VRT Q
Subjt:  GSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTTQ

Query:  DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIES
        DLIV T+AV+E  TSQTK L +EVLPSPETD  TVLEDK +N IE+IHQST+   +FFN+ D  +EKPV  EIEPQFPP DECSIIETQLSPRLTNLIES
Subjt:  DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIES

Query:  GFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAI
        GFVP+SPID+CGYSRQRIYES ISQ ILPVQVDG QLL SSSPGIN+RI+CN G HAGNDV L SGE RPSVLEDNDSVG+KSH  TSPVA+ET+TP AI
Subjt:  GFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAI

Query:  ISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGD
        I+S+CDNEDW+L +GEKSSSVQKPRKFKRLRKVGDV+KNEN +S +KTSVSP  NMVG FS++R +KKKKRDG+RRF+DNVRA+I+EEAEVSSDATISGD
Subjt:  ISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGD

Query:  -EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSP
         EDD IKSSFDSFIDDR+SASATSTQDETG  DMMAIYRRSLLSQ  SPFGRLTSP A +VTESE SP KTLN+FQ+TLTGNV+QSH++HSEH KM  SP
Subjt:  -EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSP

Query:  EVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKN
        EVVISTTG CP A EVESRNRN TFCASESVP +NLD+QFELVV GRE ISDV         DDEFYEGLDLDAVEAQAKLLLEKKVELP +MVTQ HKN
Subjt:  EVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKN

Query:  LHLDTSPSFDLGI
        L L TSPSFDLGI
Subjt:  LHLDTSPSFDLGI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQJ7 Helicase C-terminal domain-containing protein

7.7e-232

74.54

Show/hide

Query:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL
        H +  S  F  A SINEVNA+KAELE PLVYPEVS   N  ENNCIS  CSPKH           LL+ SE GSYCVRT QDLIVPT+AV +  TSQTK+
Subjt:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL

Query:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY
        LPDE  PSPETD V VLEDK MNLIE  HQ+TL    FFNK D  +EK V  EIEPQF P DE SI ETQLSPRLTNLIESGFVP+SPIDDCGYSRQRI 
Subjt:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY

Query:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS
        ES  SQ ILP QVDGLQLLNSSS GINE I+CN GF AGND+ L S EG+ S L+DN+SVGIKSH  TSP+ADE +TPLA I+S+CDNE WD   GEK S
Subjt:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS

Query:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA
        SV KP KFKRLRKVGD+KKNENI+SM KTS+SP GNMVG FS+TRQ KKKKRDG+RRFDDNV+AFI+EEAEVSSDATISGDEDD IKSS DSFIDDR++A
Subjt:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA

Query:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN
        SA+STQD T +PDMMAIYRRSLLSQ  SPFGRLTSPLA +VTESE SP KTLNIFQST+T +V+QSH+LHS+H KMNCSPEVVI+T G+CPR  +VES N
Subjt:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN

Query:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI
        RNSTFC SE VPV+NLDKQFELVV GRE IS+VD+NRN+FIDDDEFYEGLDLDAVEA AKLLL+KKVELP IMVTQQ KN+ +DTSPSFDLGI
Subjt:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI

A0A1S3B3E0 Fanconi anemia group M protein isoform X1

2.7e-237

75.38

Show/hide

Query:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL
        H +  S  F  A S NEVN +KAELE PLVYPEVS   N  ENNCIS  CSPKH           LLSSSE GSYCVRT QDLIVPT+AVNE  TSQTK+
Subjt:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL

Query:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQST---LSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY
        LPDE+ PSPETD V VLEDK MNLIE+ HQ+T    +FFNK D  +EK V  EIEPQF P DEC I ETQLSPRLTNLIESGFVP+SPIDDCGYSRQRI 
Subjt:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQST---LSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY

Query:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS
        ES  SQLILP QVDGLQLLNSSS GINE I+CNGGF AGN + L S EG+ S L+DN+SVGIKSH  TS VADE +TPLAII+S+CDNE WD   GEK S
Subjt:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS

Query:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA
        S+ KP KFKRLRKVGD+KKNEN++SM KTS+SP GNMVG FS+TRQ K+KKRDG+R+FDDNV+AFI+EEAEVSSDAT+SGDEDDKIKSSFDSFIDDR+SA
Subjt:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA

Query:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN
        SA+STQDET +PDMMAIYRRSLLSQ  SPFGRLTSPLA +VTESE SP KTLNIFQST+TG+V+QSH LHS+H KMNCSPEVVI+TTG+CPRA +VESRN
Subjt:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN

Query:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI
        RNSTFC SESVPV+NLDKQFELVV GRE IS+VD+NRN++IDDDEFYEGLDLDAVEA AKLLLEKKVELP  MVTQQ KN+ +D SPSFDLGI
Subjt:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI

A0A1S3B3H7 Fanconi anemia group M protein isoform X2

2.7e-237

75.38

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Query:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL
        H +  S  F  A S NEVN +KAELE PLVYPEVS   N  ENNCIS  CSPKH           LLSSSE GSYCVRT QDLIVPT+AVNE  TSQTK+
Subjt:  HVTMPSPEFP-AGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKH----------PLLSSSELGSYCVRTTQDLIVPTDAVNELPTSQTKL

Query:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQST---LSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY
        LPDE+ PSPETD V VLEDK MNLIE+ HQ+T    +FFNK D  +EK V  EIEPQF P DEC I ETQLSPRLTNLIESGFVP+SPIDDCGYSRQRI 
Subjt:  LPDEVLPSPETDGVTVLEDKTMNLIERIHQST---LSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIY

Query:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS
        ES  SQLILP QVDGLQLLNSSS GINE I+CNGGF AGN + L S EG+ S L+DN+SVGIKSH  TS VADE +TPLAII+S+CDNE WD   GEK S
Subjt:  ESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSS

Query:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA
        S+ KP KFKRLRKVGD+KKNEN++SM KTS+SP GNMVG FS+TRQ K+KKRDG+R+FDDNV+AFI+EEAEVSSDAT+SGDEDDKIKSSFDSFIDDR+SA
Subjt:  SVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISA

Query:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN
        SA+STQDET +PDMMAIYRRSLLSQ  SPFGRLTSPLA +VTESE SP KTLNIFQST+TG+V+QSH LHS+H KMNCSPEVVI+TTG+CPRA +VESRN
Subjt:  SATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRN

Query:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI
        RNSTFC SESVPV+NLDKQFELVV GRE IS+VD+NRN++IDDDEFYEGLDLDAVEA AKLLLEKKVELP  MVTQQ KN+ +D SPSFDLGI
Subjt:  RNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI

A0A6J1FMD3 DEAD-box ATP-dependent RNA helicase FANCM isoform X2

3.1e-233

73.25

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Query:  GSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTTQ
        GSINEV+A K ELEGP+VYPEVSA PNP ENNC S YCS KHP                                         LLSS ELGS+ VRT Q
Subjt:  GSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTTQ

Query:  DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIES
        DLIV T+AV+E  TSQTK L +EVLPSPETD  TVLEDK +N IE+IHQST+   +FFN+ D  +EKPV  EIEPQFPP DECSIIETQLSPRLTNLIES
Subjt:  DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIES

Query:  GFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAI
        GFVP+SPID+CGYSRQRIYES ISQ ILPVQVDG QLL SSSPGIN+RI+CN G HAGNDV L SGE RPSVLEDNDSVG+KSH  TSPVA+ET+TP AI
Subjt:  GFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAI

Query:  ISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGD
        I+S+CDNEDW+L +GEKSSSVQKPRKFKRLRKVGDV+KNEN +S +KTSVSP  NMVG FS++R +KKKKRDG+RRF+DNVRA+I+EEAEVSSDATISGD
Subjt:  ISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGD

Query:  -EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSP
         EDD IKSSFDSFIDDR+SASATSTQDETG  DMMAIYRRSLLSQ  SPFGRLTSP A +VTESE SP KTLN+FQ+TLTGNV+QSH++HSEH KM  SP
Subjt:  -EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSP

Query:  EVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKN
        EVVISTTG CP A EVESRNRN TFCASESVP +NLD+QFELVV GRE ISDV         DDEFYEGLDLDAVEAQAKLLLEKKVELP +MVTQ HKN
Subjt:  EVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKN

Query:  LHLDTSPSFDLGI
        L L TSPSFDLGI
Subjt:  LHLDTSPSFDLGI

A0A6J1K1N4 DEAD-box ATP-dependent RNA helicase FANCM isoform X2

5.9e-232

72.59

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Query:  GSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTTQ
        GSINEVNA KAELEGP+VYPEVSA PNP ENNCIS YCS KHP                                         LLSS  LGS+ VRT Q
Subjt:  GSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHP-----------------------------------------LLSSSELGSYCVRTTQ

Query:  DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIES
        DLIV T+AV+E  TSQTK L +EVLPSPETD  TVLEDK +N IE+IHQST+   +FFN+ D  +EKPV  EIEPQFPP DEC+IIETQLSPRLTNLIES
Subjt:  DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTL---SFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIES

Query:  GFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAI
        GFVP+SPID+CGYSRQRIYES ISQ IL VQVDG QLL SSSPGIN+RI+CN G HAGND+ L SGE RPSVLEDNDSVG+KSH  TSPVA+ET+TP AI
Subjt:  GFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAI

Query:  ISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGD
        I+S+CDNEDW+L +GEKSSSVQKPRKFKRLRKVGDV+KNEN +S +KTSVSP  NMVG FS++R +KKKKRDG+RRF+DNVR +I+EEAEVSSDATISGD
Subjt:  ISSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGD

Query:  -EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSP
         EDDKIKSSFDSFIDDR+SASATSTQDETG  DMMAIYRRSLLSQ  SPFGRLTSPLA +VTES+ SP KTLN+FQ+TLTGNV+QSH++HSEH KM  SP
Subjt:  -EDDKIKSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSP

Query:  EVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKN
        EVVISTTG CP A EVESR RN TFCASESVP +NLD++FELVV GRE ISDV         DDEFYEGLDLDAVEAQAKLLLEKKVELP +MVTQ HKN
Subjt:  EVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV-GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKN

Query:  LHLDTSPSFDLGI
          L TSPSFDLGI
Subjt:  LHLDTSPSFDLGI

SwissProt top hits

e value

%identity

Alignment

I3XHK1 DEAD-box ATP-dependent RNA helicase FANCM

8.7e-39

33.41

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Query:  DDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSV
        +D+C  +E  LSPRLTN I+SG VP SP+ D G    R  +    QL  P++        SS P    +  CN       +++ T+ E R    E   + 
Subjt:  DDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSV

Query:  GIKSHPSTSPVADETRTPLAII--SSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGD----VKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDG
        G +   + SP+ ++ RTPLA +  +++   +DW + +GEK  ++++PRK KRLR++GD    VK+N             PG        +R   KK   G
Subjt:  GIKSHPSTSPVADETRTPLAII--SSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGD----VKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDG

Query:  QRR--FDDNVRAFIDEEAEVSSDATISGDEDDKI--KSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGK
        +++   DD+V+ FIDEEAEVSS A +S DE++ +   S  DSFIDD    +A +TQ E+G+ DMMA+YRRSLLSQS  P  R     A  ++   A P  
Subjt:  QRR--FDDNVRAFIDEEAEVSSDATISGDEDDKI--KSSFDSFIDDRISASATSTQDETGQPDMMAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGK

Query:  TLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFEL---VVGRELISDVDANRNLF----IDDD
         +N  +S    ++    +  + +S+ N    ++I    +   ++  +SR R  + C S + PV+NL+ +F        +E    V +N         DDD
Subjt:  TLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFEL---VVGRELISDVDANRNLF----IDDD

Query:  EFYEGLDLDAVEAQAKLLLEKK---------VELPPIMVTQQHKNLHLDTSPSFDLGI
         F+  LD DA+EAQA LLL K+           + P    Q+   +  D +PSFDLG+
Subjt:  EFYEGLDLDAVEAQAKLLLEKK---------VELPPIMVTQQHKNLHLDTSPSFDLGI

Arabidopsis top hits

e value

%identity

Alignment

AT1G35530.1 DEAD/DEAH box RNA helicase family protein

1.2e-35

31.61

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Query:  DDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSV
        +D+C  +E  LSPRLTN I+SG VP SP+ D G    R  +    QL  P++        SS P    +  CN       +++ T+ E R    E   + 
Subjt:  DDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSV

Query:  GIKSHPSTSPVADETRTPLAII--SSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGD----VKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDG
        G +   + SP+ ++ RTPLA +  +++   +DW + +GEK  ++++PRK KRLR++GD    VK+N             PG        +R   KK   G
Subjt:  GIKSHPSTSPVADETRTPLAII--SSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGD----VKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDG

Query:  QRR--FDDNVRAFIDEEAEVSSDATISGDEDDKI--KSSFDSFIDDRISASATSTQDETGQPDMMAIY--------------------------RRSLLS
        +++   DD+V+ FIDEEAEVSS A +S DE++ +   S  DSFIDD    +A +TQ E+G+ DMMA+Y                          RRSLLS
Subjt:  QRR--FDDNVRAFIDEEAEVSSDATISGDEDDKI--KSSFDSFIDDRISASATSTQDETGQPDMMAIY--------------------------RRSLLS

Query:  QSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFEL--
        QS  P  R     A  ++   A P   +N  +S    ++    +  + +S+ N    ++I    +   ++  +SR R  + C S + PV+NL+ +F    
Subjt:  QSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFEL--

Query:  -VVGRELISDVDANRNLF----IDDDEFYEGLDLDAVEAQAKLLLEKK---------VELPPIMVTQQHKNLHLDTSPSFDLGI
            +E    V +N         DDD F+  LD DA+EAQA LLL K+           + P    Q+   +  D +PSFDLG+
Subjt:  -VVGRELISDVDANRNLF----IDDDEFYEGLDLDAVEAQAKLLLEKK---------VELPPIMVTQQHKNLHLDTSPSFDLGI

AT1G35530.2 DEAD/DEAH box RNA helicase family protein

1.5e-33

30.99

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Query:  DDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSV
        +D+C  +E  LSPRLTN I+SG VP SP+ D G    R  +    QL  P++        SS P    +  CN       +++ T+ E R    E   + 
Subjt:  DDECSIIETQLSPRLTNLIESGFVPNSPIDDCGYSRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSV

Query:  GIKSHPSTSPVADETRTPLAII--SSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGD----VKKN-------ENIKSMK--------KTSVSPPGNMVG
        G +   + SP+ ++ RTPLA +  +++   +DW + +GEK  ++++PRK KRLR++GD    VK+N       ++I+S          K   +     + 
Subjt:  GIKSHPSTSPVADETRTPLAII--SSNCDNEDWDLFTGEKSSSVQKPRKFKRLRKVGD----VKKN-------ENIKSMK--------KTSVSPPGNMVG

Query:  AFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKI--KSSFDSFIDDRISASATSTQDETGQPDMMAIY-------------------
        + +     KKKK       DD+V+ FIDEEAEVSS A +S DE++ +   S  DSFIDD    +A +TQ E+G+ DMMA+Y                   
Subjt:  AFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKI--KSSFDSFIDDRISASATSTQDETGQPDMMAIY-------------------

Query:  -------RRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRNRNSTFCASESV
               RRSLLSQS  P  R     A  ++   A P   +N  +S    ++    +  + +S+ N    ++I    +   ++  +SR R  + C S + 
Subjt:  -------RRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRNRNSTFCASESV

Query:  PVVNLDKQFEL---VVGRELISDVDANRNLF----IDDDEFYEGLDLDAVEAQAKLLLEKK---------VELPPIMVTQQHKNLHLDTSPSFDLGI
        PV+NL+ +F        +E    V +N         DDD F+  LD DA+EAQA LLL K+           + P    Q+   +  D +PSFDLG+
Subjt:  PVVNLDKQFEL---VVGRELISDVDANRNLF----IDDDEFYEGLDLDAVEAQAKLLLEKK---------VELPPIMVTQQHKNLHLDTSPSFDLGI

Sequences

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CDS sequence

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ATGCCTAAAGAGAAAGGTTTTGAAAAAGCTGATTGGGAATCCGGAGGGGCTTCAGTTGTGGTGGCTATCCCTTCTGTCATTGCTGTCATTGGTTCACGGAATACCACATT
ATTAATTGCACACGTAACGATGCCATCGCCCGAATTTCCTGCAGGTTCAATAAATGAAGTCAACGCAGCAAAGGCAGAATTAGAAGGGCCGTTAGTTTATCCTGAAGTCT
CGGCAGCCCCAAATCCTGTAGAAAATAATTGTATTTCCGATTACTGTTCTCCCAAGCATCCTTTGTTGAGTTCTTCTGAGCTAGGTTCTTACTGTGTAAGAACTACTCAG
GACTTAATTGTGCCGACTGATGCTGTCAACGAACTACCAACTTCTCAAACAAAACTCTTACCGGATGAGGTTTTGCCAAGCCCTGAAACAGATGGTGTAACTGTCTTGGA
AGACAAAACAATGAATCTGATTGAGAGAATTCATCAAAGCACTCTCTCTTTTTTTAATAAAGAAGATGCTGCCAATGAAAAGCCTGTTGGTCCAGAAATTGAGCCACAGT
TTCCCCCAGATGACGAATGCAGTATAATTGAGACTCAGCTTAGTCCTCGTCTCACTAATTTAATCGAAAGTGGTTTTGTACCAAATTCACCAATTGATGATTGTGGATAT
TCTAGACAAAGGATATATGAATCCACAATATCACAGCTTATCTTGCCTGTCCAAGTGGATGGTCTACAGCTTTTAAACTCCTCAAGTCCCGGGATAAATGAAAGAATTGA
TTGCAATGGGGGCTTCCATGCTGGAAATGATGTTTTACTCACTAGTGGTGAAGGTCGACCTTCCGTACTCGAGGATAATGATAGTGTGGGTATAAAGTCACATCCCTCTA
CATCTCCTGTGGCTGATGAAACACGAACTCCCTTGGCTATTATTTCAAGCAATTGTGATAATGAAGATTGGGATTTATTTACTGGAGAAAAGTCCAGCAGTGTACAGAAG
CCCCGAAAATTCAAAAGATTGCGAAAGGTTGGAGACGTGAAGAAAAATGAAAACATCAAAAGCATGAAAAAAACTTCAGTTTCTCCGCCGGGAAATATGGTTGGAGCTTT
TTCTAATACCAGACAATTAAAAAAAAAGAAACGGGATGGTCAAAGGAGATTTGACGACAATGTTAGAGCATTTATTGACGAGGAAGCTGAGGTCTCTTCGGATGCTACCA
TATCTGGGGATGAAGATGACAAGATTAAGAGCTCGTTTGATAGTTTCATAGATGACAGGATTAGTGCTAGTGCCACGAGTACTCAAGATGAAACAGGCCAACCCGATATG
ATGGCGATTTACAGACGTTCTTTGCTAAGTCAATCTCGATCACCATTTGGGAGGCTGACTTCACCCCTCGCGATCCAAGTAACTGAAAGTGAAGCTTCTCCTGGCAAGAC
ATTGAATATTTTCCAGTCAACTCTAACAGGCAATGTGGATCAATCTCATTCACTGCATTCCGAACACTCCAAAATGAACTGTAGCCCAGAAGTTGTAATTTCTACTACTG
GCATTTGCCCTAGAGCGGCAGAAGTCGAAAGCAGGAATAGAAATTCGACATTTTGTGCATCAGAATCTGTTCCTGTAGTTAATTTGGATAAACAGTTTGAGTTGGTGGTA
GGAAGAGAATTGATAAGTGATGTGGATGCAAATAGAAATTTGTTCATTGATGATGATGAATTTTATGAAGGTCTTGACCTTGATGCAGTCGAGGCCCAGGCAAAATTGCT
CCTTGAGAAGAAAGTTGAGCTGCCTCCGATTATGGTTACCCAGCAACACAAGAATCTTCATCTTGACACTTCTCCATCTTTTGATCTCGGGATCTGA

mRNA sequence

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Protein sequence

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MPKEKGFEKADWESGGASVVVAIPSVIAVIGSRNTTLLIAHVTMPSPEFPAGSINEVNAAKAELEGPLVYPEVSAAPNPVENNCISDYCSPKHPLLSSSELGSYCVRTTQ
DLIVPTDAVNELPTSQTKLLPDEVLPSPETDGVTVLEDKTMNLIERIHQSTLSFFNKEDAANEKPVGPEIEPQFPPDDECSIIETQLSPRLTNLIESGFVPNSPIDDCGY
SRQRIYESTISQLILPVQVDGLQLLNSSSPGINERIDCNGGFHAGNDVLLTSGEGRPSVLEDNDSVGIKSHPSTSPVADETRTPLAIISSNCDNEDWDLFTGEKSSSVQK
PRKFKRLRKVGDVKKNENIKSMKKTSVSPPGNMVGAFSNTRQLKKKKRDGQRRFDDNVRAFIDEEAEVSSDATISGDEDDKIKSSFDSFIDDRISASATSTQDETGQPDM
MAIYRRSLLSQSRSPFGRLTSPLAIQVTESEASPGKTLNIFQSTLTGNVDQSHSLHSEHSKMNCSPEVVISTTGICPRAAEVESRNRNSTFCASESVPVVNLDKQFELVV
GRELISDVDANRNLFIDDDEFYEGLDLDAVEAQAKLLLEKKVELPPIMVTQQHKNLHLDTSPSFDLGI

Clc11G08800 (gene) of Watermelon (cordophanus) v2 genome