CuGenDBv2

Gene ID	Clc11G09050
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	protein PARTING DANCERS
Genome location	ClcChr11:11125415..11130491
RNA-Seq Expression	Clc11G09050
Synteny	Clc11G09050
Gene Ontology terms	GO:0000712 - resolution of meiotic recombination intermediates (biological process) GO:0007140 - male meiotic nuclear division (biological process) GO:0009555 - pollen development (biological process) GO:0010845 - positive regulation of reciprocal meiotic recombination (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0005634 - nucleus (cellular component) GO:0005694 - chromosome (cellular component)
InterPro domains	IPR010994 - RuvA domain 2-like IPR039172 - Protein parting dancers

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037049.1 uncharacterized protein E6C27_scaffold86G001440 [Cucumis melo var. makuwa]

6.3e-122

85.82

Show/hide

Query:  NHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQNDSFV
        N GGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVVVLPTKEQNDSFV
Subjt:  NHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQNDSFV

Query:  QSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMD
        QSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKF LNTFLN  HLQ LYQITACKQQD+I                  L  +RKRSVQVMD
Subjt:  QSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMD

Query:  AFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
        AFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLS KIN
Subjt:  AFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

XP_004138826.1 protein PARTING DANCERS isoform X3 [Cucumis sativus]

1.5e-112

76.39

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Query:  MENLSQRVANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ
        M N SQR A++M GNQ K KN GGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQ
Subjt:  MENLSQRVANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ

Query:  FANFYVVVVLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFN
        FAN YVVVVLPTKEQNDSFVQSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRG                         ACKQQD+I           
Subjt:  FANFYVVVVLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFN

Query:  HRLPLLGLLLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
               L  +RKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIR+FFRDPK YLSPKIN
Subjt:  HRLPLLGLLLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

XP_008441171.1 PREDICTED: uncharacterized protein LOC103485388 isoform X1 [Cucumis melo]

6.5e-127

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Query:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV
        A++MDGN  K KNHGGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVV
Subjt:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV

Query:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL
        VLPTKEQNDSFVQSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKF LNTFLN  HLQ LYQITACKQQD+I                  L
Subjt:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL

Query:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
          +RKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLS KIN
Subjt:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

XP_008441174.1 PREDICTED: uncharacterized protein LOC103485388 isoform X2 [Cucumis melo]

7.7e-120

81.79

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Query:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV
        A++MDGN  K KNHGGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVV
Subjt:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV

Query:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL
        VLPTKEQNDSFVQSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKF LNTFLN  HLQ LYQITACKQQD+I                  L
Subjt:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL

Query:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
          +RKRSVQVMDAFRRVMSSVPGLDDHDANS         AIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLS KIN
Subjt:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

XP_038884563.1 protein PARTING DANCERS isoform X1 [Benincasa hispida]

7.9e-117

78.82

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Query:  MENLSQRVANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ
        MEN SQR AN+MDGN+ K KN GGGVCLMSNVWRD+QHPSFINFMS+FLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTS I+SRVQKLKKQ
Subjt:  MENLSQRVANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ

Query:  FANFYVVVVLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFN
        FANFYVVVVLPTKEQNDSFVQSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRG                         ACKQQDVI           
Subjt:  FANFYVVVVLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFN

Query:  HRLPLLGLLLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
             L L  +RKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIR+FFRDPK YLSPKIN
Subjt:  HRLPLLGLLLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMP7 Uncharacterized protein

7.5e-113

76.39

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Query:  MENLSQRVANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ
        M N SQR A++M GNQ K KN GGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQ
Subjt:  MENLSQRVANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ

Query:  FANFYVVVVLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFN
        FAN YVVVVLPTKEQNDSFVQSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRG                         ACKQQD+I           
Subjt:  FANFYVVVVLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFN

Query:  HRLPLLGLLLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
               L  +RKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIR+FFRDPK YLSPKIN
Subjt:  HRLPLLGLLLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

A0A1S3B2D1 uncharacterized protein LOC103485388 isoform X3

2.9e-112

77.5

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Query:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV
        A++MDGN  K KNHGGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVV
Subjt:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV

Query:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL
        VLPTKEQNDSFVQSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRG                         ACKQQD+I                  L
Subjt:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL

Query:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
          +RKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLS KIN
Subjt:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

A0A1S3B3G4 uncharacterized protein LOC103485388 isoform X1

3.1e-127

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Query:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV
        A++MDGN  K KNHGGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVV
Subjt:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV

Query:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL
        VLPTKEQNDSFVQSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKF LNTFLN  HLQ LYQITACKQQD+I                  L
Subjt:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL

Query:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
          +RKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLS KIN
Subjt:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

A0A1S3B3K1 uncharacterized protein LOC103485388 isoform X2

3.7e-120

81.79

Show/hide

Query:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV
        A++MDGN  K KNHGGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVV
Subjt:  ANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVV

Query:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL
        VLPTKEQNDSFVQSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKF LNTFLN  HLQ LYQITACKQQD+I                  L
Subjt:  VLPTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGL

Query:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
          +RKRSVQVMDAFRRVMSSVPGLDDHDANS         AIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLS KIN
Subjt:  LLKRKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

A0A5A7T6P8 Uncharacterized protein

3.0e-122

85.82

Show/hide

Query:  NHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQNDSFV
        N GGGVCLMSNVWRD+QHPSFINF+S+FLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVVVLPTKEQNDSFV
Subjt:  NHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQNDSFV

Query:  QSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMD
        QSYFRN MEI KPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKF LNTFLN  HLQ LYQITACKQQD+I                  L  +RKRSVQVMD
Subjt:  QSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMD

Query:  AFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
        AFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLS KIN
Subjt:  AFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

SwissProt top hits

e value

%identity

Alignment

F4IDW9 Protein PARTING DANCERS

1.1e-71

55.3

Show/hide

Query:  GVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQNDSFVQSYF
        GVC+MSN W+ +Q PS INF+S+FL  NSFRLNFV I PDLIFNCGG+S+AF F+T WD SN +SIFSRV++LK QFA  YVV  L TKEQ+DSF++SYF
Subjt:  GVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQNDSFVQSYF

Query:  RNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMDAFRR
        +  ME  KP FV V D EMGFEKIVKIAHSRG                          CKQQ V                   L ++RKR+VQ  + F R
Subjt:  RNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMDAFRR

Query:  VMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
         ++S+P ++ HDAN+L QAIGSIEAIAKASKE IL NTDLS  KA+ +  FF+DP+FYLSPK N
Subjt:  VMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

Q6L5B5 Protein PARTING DANCERS homolog

2.4e-71

53.14

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Query:  KPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQND
        +P   G GVC MS  WRD+Q PS INF+++FL  NS+RLNF+ I PD IFN G LSVAF F T+WDC N  ++FSRV  LK+Q  + YVVV +PTKEQN+
Subjt:  KPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQND

Query:  SFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQ
        SF +SY +  M++  P FV V D EMGFEKIVKIAH+ G                          CKQQD+I                  L  +R+++VQ
Subjt:  SFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQ

Query:  VMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
          D+F RV++S+PG+D+HDAN+L QAIGSIEAIAKASK++ILENTDLS DKAE I  FFRDP++YLSPKIN
Subjt:  VMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

Arabidopsis top hits

e value

%identity

Alignment

AT1G12790.1 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

7.5e-73

55.3

Show/hide

Query:  GVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQNDSFVQSYF
        GVC+MSN W+ +Q PS INF+S+FL  NSFRLNFV I PDLIFNCGG+S+AF F+T WD SN +SIFSRV++LK QFA  YVV  L TKEQ+DSF++SYF
Subjt:  GVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVLPTKEQNDSFVQSYF

Query:  RNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMDAFRR
        +  ME  KP FV V D EMGFEKIVKIAHSRG                          CKQQ V                   L ++RKR+VQ  + F R
Subjt:  RNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMDAFRR

Query:  VMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN
         ++S+P ++ HDAN+L QAIGSIEAIAKASKE IL NTDLS  KA+ +  FF+DP+FYLSPK N
Subjt:  VMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAATTTGTCACAGAGAGTTGCCAATGAAATGGATGGAAATCAAGACAAACCAAAAAATCACGGTGGTGGAGTCTGTTTGATGAGCAATGTATGGAGAGATCAGCA
GCATCCATCCTTCATCAATTTCATGTCGAGTTTCCTTTGCACAAACTCATTTCGCCTCAATTTTGTTCCAATTGTCCCAGACTTGATATTCAATTGCGGGGGTTTATCGG
TGGCTTTTGCTTTCCTGACAAGTTGGGATTGCAGCAATACGTCATCAATCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAGTTTGCAAATTTTTATGTTGTTGTTGTCCTT
CCAACCAAGGAGCAGAATGATTCATTTGTTCAATCTTACTTCAGAAATGCGATGGAGATTAGTAAGCCACCATTTGTAGCAGTTCAGGATATTGAGATGGGCTTCGAAAA
GATTGTAAAGATAGCACACTCTCGTGGAGGTAGTAACCATTTTAAATTTGGGTTGAATACTTTCCTTAATCATCTTCATCTTCAATTATTATATCAAATTACAGCATGCA
AGCAGCAAGATGTCATTGTTCATGTAGTGTTTTCTTACACGAGTTTTAATCACCGTCTCCCCCTTTTGGGGCTTTTGTTGAAGAGGAAGAGATCAGTGCAAGTCATGGAT
GCTTTTCGTAGAGTCATGTCTTCTGTACCAGGCCTTGATGATCACGATGCGAATTCGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCGAAGGAGTA
CATTTTGGAGAACACAGATCTGTCAGTGGACAAGGCGGAGAGAATTAGGACCTTTTTCAGGGATCCAAAATTCTACCTCAGTCCCAAAATAAACTGA

mRNA sequence

Show/hide mRNA sequence

CTCGGCTCCCGCTGCCTCTCTTCCTCTACCATTTCTGTACAATTTTTCTGCTACTACTGAGAATTGGCTATGGAGAATTTGTCACAGAGAGTTGCCAATGAAATGGATGG
AAATCAAGACAAACCAAAAAATCACGGTGGTGGAGTCTGTTTGATGAGCAATGTATGGAGAGATCAGCAGCATCCATCCTTCATCAATTTCATGTCGAGTTTCCTTTGCA
CAAACTCATTTCGCCTCAATTTTGTTCCAATTGTCCCAGACTTGATATTCAATTGCGGGGGTTTATCGGTGGCTTTTGCTTTCCTGACAAGTTGGGATTGCAGCAATACG
TCATCAATCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAGTTTGCAAATTTTTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAGAATGATTCATTTGTTCAATCTTACTT
CAGAAATGCGATGGAGATTAGTAAGCCACCATTTGTAGCAGTTCAGGATATTGAGATGGGCTTCGAAAAGATTGTAAAGATAGCACACTCTCGTGGAGGTAGTAACCATT
TTAAATTTGGGTTGAATACTTTCCTTAATCATCTTCATCTTCAATTATTATATCAAATTACAGCATGCAAGCAGCAAGATGTCATTGTTCATGTAGTGTTTTCTTACACG
AGTTTTAATCACCGTCTCCCCCTTTTGGGGCTTTTGTTGAAGAGGAAGAGATCAGTGCAAGTCATGGATGCTTTTCGTAGAGTCATGTCTTCTGTACCAGGCCTTGATGA
TCACGATGCGAATTCGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGACAAGGCGGAGA
GAATTAGGACCTTTTTCAGGGATCCAAAATTCTACCTCAGTCCCAAAATAAACTGATATTCGGAATCTCTTTGGTCTCGGATGAATTCCATGGAAGAATTTCGAGGTCAG
TCATATTTTAACATTGCTTTTGCTGCCTGCTTTGGAATTCATACTTATGGTTTTGAGCAAACCCAGACGGATAAACCTCAAAATTTAAACAGTGATTGAACAGAATAAGT
AAAAGAAAAATAGATAAGATCAAATAGAAGTAAAAGAAAGAAATCTCTATAAGCAACTGGAAATTGAACAGAATAAGCAGTTCCCAAGTGTTAAACTGGGCGAGAAGATA
CGAACCGAGAGATGGAAAGAAATAATCTTAGCCATTGATGACTTGATGTTGCCAATATAATATCCGCTGCTTAGGCTGTAGGGATGTTTAGTCAAGTTTGACTCGGTTTA
AAGTTACTGTTGACTCATTCAGATTTTGAATATATAAATTTCACGCGAAATTATAAACGTTTTGCTACCTATTGTCTGTGCGGCGGTCGTTTGTTTAGATTGAGTCTCAT
TCCATTTCCAGTAGCCAAAGCCAAGCCACATAATAAATTGCCGTAATGGATTGGATTTATCAAACATGGATGCCGGATGGAGTCAACCCATGTGATAAATTTCCAATTAG
GTTCTATGGGCAGCTATTTATTATTATTATTGTTATT

Protein sequence

Show/hide protein sequence

MENLSQRVANEMDGNQDKPKNHGGGVCLMSNVWRDQQHPSFINFMSSFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVVL
PTKEQNDSFVQSYFRNAMEISKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFGLNTFLNHLHLQLLYQITACKQQDVIVHVVFSYTSFNHRLPLLGLLLKRKRSVQVMD
AFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRTFFRDPKFYLSPKIN

Clc11G09050 (gene) of Watermelon (cordophanus) v2 genome