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Clc11G09090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G09090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDisease resistance protein (TIR-NBS class)
Genome locationClcChr11:11333153..11334244
RNA-Seq ExpressionClc11G09090
SyntenyClc11G09090
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
InterPro domainsIPR000157 - Toll/interleukin-1 receptor homology (TIR) domain
IPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON48345.1 LOW QUALITY PROTEIN: TIR domain containing protein [Trema orientale]5.9e-1150Show/hide
Query:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE-ELKRGQQIAPALLKAIHNN
        M  + ++++    S+ I+     YDVF+SFRGED RNNF SHL AA +RK   T+FDE  LKRG++I+PAL++AI N+
Subjt:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE-ELKRGQQIAPALLKAIHNN

PRQ38442.1 putative TIR domain-containing protein [Rosa chinensis]5.9e-1144.09Show/hide
Query:  CLLRSQFNILLLMAESLSSSSFQPISTPINNIAVQ-------YDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAI
        CLLR Q  + L    S +S +F  + + ++ + ++       Y VF+SFRGED RNNF SHL +A  + G  TF D++LKRG++I+PALL+AI
Subjt:  CLLRSQFNILLLMAESLSSSSFQPISTPINNIAVQ-------YDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAI

RVW15031.1 TMV resistance protein N [Vitis vinifera]1.6e-1149.38Show/hide
Query:  AESLSSSSFQPISTPINNIAV-----QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        + S SSSS  P S+P ++ +      +YDVF+SFRGED R +F  HL  A  +KG  TF D++L+RG+QI+PALLKAI  +
Subjt:  AESLSSSSFQPISTPINNIAV-----QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

XP_024177746.1 uncharacterized protein LOC112183608 [Rosa chinensis]2.6e-1151.9Show/hide
Query:  LMAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE-ELKRGQQIAPALLKAIHNN
        L+   +   SFQP S+   + + +YDVF+SFRGED R+NFVSHL AA ER G  TF D+  L+RG+ I+P LLKAI ++
Subjt:  LMAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE-ELKRGQQIAPALLKAIHNN

XP_038876489.1 disease resistance protein RLM3-like [Benincasa hispida]5.0e-2685.71Show/hide
Query:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        MAE  SSSSFQPIS+P NNIAVQYDVFVSFRGEDVRNNFVSHLQAAF+RKG  TFFDEELKRGQQI+PALLKAI  +
Subjt:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

TrEMBL top hitse value%identityAlignment
A0A2P5BHT4 TIR domain containing protein2.9e-1150Show/hide
Query:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE-ELKRGQQIAPALLKAIHNN
        M  + ++++    S+ I+     YDVF+SFRGED RNNF SHL AA +RK   T+FDE  LKRG++I+PAL++AI N+
Subjt:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE-ELKRGQQIAPALLKAIHNN

A0A2P6Q5H1 Putative winged helix-turn-helix DNA-binding domain, toll-like receptor3.7e-1156.94Show/hide
Query:  SSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        SSSS  P  +P +  A +YDVF+SFRGED RN F SHL AA  RK   T+ D EL RG++IAPALL+AI  +
Subjt:  SSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

A0A2P6QW67 Putative TIR domain-containing protein2.9e-1144.09Show/hide
Query:  CLLRSQFNILLLMAESLSSSSFQPISTPINNIAVQ-------YDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAI
        CLLR Q  + L    S +S +F  + + ++ + ++       Y VF+SFRGED RNNF SHL +A  + G  TF D++LKRG++I+PALL+AI
Subjt:  CLLRSQFNILLLMAESLSSSSFQPISTPINNIAVQ-------YDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAI

A0A438BVL8 TMV resistance protein N7.5e-1249.38Show/hide
Query:  AESLSSSSFQPISTPINNIAV-----QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        + S SSSS  P S+P ++ +      +YDVF+SFRGED R +F  HL  A  +KG  TF D++L+RG+QI+PALLKAI  +
Subjt:  AESLSSSSFQPISTPINNIAV-----QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

A0A6P5TE95 TMV resistance protein N-like3.7e-1153.73Show/hide
Query:  QPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        QP+S+  ++ +  YDVF+SFRGED R NF  HL  A  RKG  TF D EL RG++I+PAL+KAI  +
Subjt:  QPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

SwissProt top hitse value%identityAlignment
F4JWM0 Disease resistance-like protein DSC21.0e-1046.05Show/hide
Query:  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        + S S SS   +S+PI+     + VF SFRGEDVR  F+SH+Q  F+ KG   F D+E+KRG+ I P L +AI  +
Subjt:  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

O82500 Putative disease resistance protein At4g111701.5e-0956.36Show/hide
Query:  QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        +YDVF SFRGEDVRNNF+SHL   FE KG  TF D+ +KR   I   L  AI  +
Subjt:  QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

Q9FI14 Disease resistance protein TAO18.8e-1048.05Show/hide
Query:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        ++ SLSSSS  P S   N +   + VF+SFRGEDVR   +SH+Q  F+R G   F D E+KRG  I P LL+AI  +
Subjt:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

V9M2S5 Disease resistance protein RPV14.2e-1249.35Show/hide
Query:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        MA + S  +    STP       YDVF+SFRGED R NF  HL +A  R+G  TF D+ L+RG+ IAP LLKAI  +
Subjt:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

V9M398 Disease resistance protein RUN13.8e-1351.32Show/hide
Query:  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        + S +SSS    STP     + YDVF+SFRGED R NF  HL +A  R+G  TF D++L+RG+ IAP LLKAI  +
Subjt:  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

Arabidopsis top hitse value%identityAlignment
AT1G69550.1 disease resistance protein (TIR-NBS-LRR class)9.7e-1239.62Show/hide
Query:  RRREEEEGTESKSCLLRSQFNILLLMAESLSSSSFQPIS--TPINNIAV--QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALL
        R  +E E   S S    S          +LSSS+  P S  +P ++++    + VF SFRG+DVR NF+SH+Q  F RKG   F D E++RG+ I P L+
Subjt:  RRREEEEGTESKSCLLRSQFNILLLMAESLSSSSFQPIS--TPINNIAV--QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALL

Query:  KAIHNN
        KAI  +
Subjt:  KAIHNN

AT3G04220.1 Disease resistance protein (TIR-NBS-LRR class) family4.7e-1448.72Show/hide
Query:  ESLSSSSFQPI-STPINNIAV--QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        E+ SSSS QP  S P++++++  +YDVF SFRGEDVR +F+SH+Q  F+R+G   F D  +KRG+ I P L++AI  +
Subjt:  ESLSSSSFQPI-STPINNIAV--QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

AT5G11250.1 Disease resistance protein (TIR-NBS-LRR class)9.7e-1244.3Show/hide
Query:  MAESLSSSSFQPIST--PINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        ++ S S SS  P S   P ++    + VF SF GEDVR +F+SH+Q  F+R G   F D E+KRG+ I P LL+AI  +
Subjt:  MAESLSSSSFQPIST--PINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

AT5G18370.1 Disease resistance protein (TIR-NBS-LRR class) family7.4e-1246.05Show/hide
Query:  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        + S S SS   +S+PI+     + VF SFRGEDVR  F+SH+Q  F+ KG   F D+E+KRG+ I P L +AI  +
Subjt:  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN

AT5G44510.1 target of AVRB operation16.3e-1148.05Show/hide
Query:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN
        ++ SLSSSS  P S   N +   + VF+SFRGEDVR   +SH+Q  F+R G   F D E+KRG  I P LL+AI  +
Subjt:  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGGAATCGACAATGGAAGAAGAAGGGAGAAAGAAGGGACCAAATCGAGAACGGAAGAAGAAGGGAGGAAGAAGAAGGGACGGAATCAAAGAGTTGCCTCCTCCG
GAGTCAGTTCAATATCCTTCTACTTATGGCTGAATCTTTATCATCATCGTCGTTTCAACCCATTTCTACTCCGATCAATAATATTGCAGTTCAATATGATGTGTTCGTGA
GTTTTCGAGGCGAAGATGTAAGAAATAATTTTGTTAGTCATCTTCAGGCAGCATTCGAACGCAAAGGAACCGCAACTTTTTTCGATGAAGAGCTCAAGAGAGGACAGCAA
ATTGCTCCCGCTCTTCTTAAAGCTATACACAACAATCTTCCATTTCATCGTCGTTTTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGGAATCGACAATGGAAGAAGAAGGGAGAAAGAAGGGACCAAATCGAGAACGGAAGAAGAAGGGAGGAAGAAGAAGGGACGGAATCAAAGAGTTGCCTCCTCCG
GAGTCAGTTCAATATCCTTCTACTTATGGCTGAATCTTTATCATCATCGTCGTTTCAACCCATTTCTACTCCGATCAATAATATTGCAGTTCAATATGATGTGTTCGTGA
GTTTTCGAGGCGAAGATGTAAGAAATAATTTTGTTAGTCATCTTCAGGCAGCATTCGAACGCAAAGGAACCGCAACTTTTTTCGATGAAGAGCTCAAGAGAGGACAGCAA
ATTGCTCCCGCTCTTCTTAAAGCTATACACAACAATCTTCCATTTCATCGTCGTTTTCTCTGA
Protein sequenceShow/hide protein sequence
MERNRQWKKKGERRDQIENGRRREEEEGTESKSCLLRSQFNILLLMAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQ
IAPALLKAIHNNLPFHRRFL