; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G09125 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G09125
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCCHC-type domain-containing protein
Genome locationClcChr11:11357810..11358163
RNA-Seq ExpressionClc11G09125
SyntenyClc11G09125
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044949.1 hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa]3.8e-3374.75Show/hide
Query:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP
        VINLTNN+LTDYLSFDD+ A VLE++N+CKN ++KLVSSQQA+AL VTR    EC S+GS+NQGRSKS+SKK MKCYNCGKKGH+KK+CW+LNKKD NP
Subjt:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP

KAE8706559.1 hypothetical protein F3Y22_tig00110392pilonHSYRG00193 [Hibiscus syriacus]2.7e-2357.76Show/hide
Query:  NMLNFYFKVFLTCLINFVINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKG
        N+LNFYFKV+   +    INLTN+ +T  L FDD+ AAVL+++N+ KN +++ V+ QQA+AL   R  S ECG + S   GRSKSRSK N+KCYNCG KG
Subjt:  NMLNFYFKVFLTCLINFVINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKG

Query:  HLKKDCWNLNKKDSNP
        HLKKDCW+LN K+SNP
Subjt:  HLKKDCWNLNKKDSNP

KAF2314531.1 hypothetical protein GH714_027382 [Hevea brasiliensis]4.2e-2462.77Show/hide
Query:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNK
        +INLTNN+LTDYL F+D+ AAVLE++++ KN ++KL +SQQ +AL++ R  S E GS+GSQN  RSKSRSKKN KCY+CGK+GH+KKDCW+  K
Subjt:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNK

TYK16527.1 hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa]4.0e-3577.78Show/hide
Query:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP
        VINLTNN+LTDYLSFDD+VA VLE++N+CKN ++KLVSSQQA+ L VTR    EC S+GS+NQGRSKS+SKKNMKCYNCGKKGH+KK+CWNLNKKDSNP
Subjt:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP

TYK21892.1 polyprotein [Cucumis melo var. makuwa]7.1e-2458.97Show/hide
Query:  LINFVINLTNNVLT------------DYLS--FDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKK
        + N  + L +NVL+            D+L+  FDD+VAAVLE++N+ KN ++KLVSSQQA+AL+V +    +  S+GS+NQGRSKSRSKKNMKCYNCGKK
Subjt:  LINFVINLTNNVLT------------DYLS--FDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKK

Query:  GHLKKDCWNLNKKDSNP
        GHLKK+CWNLNKK SNP
Subjt:  GHLKKDCWNLNKKDSNP

TrEMBL top hitse value%identityAlignment
A0A5A7TUN0 Uncharacterized protein1.8e-3374.75Show/hide
Query:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP
        VINLTNN+LTDYLSFDD+ A VLE++N+CKN ++KLVSSQQA+AL VTR    EC S+GS+NQGRSKS+SKK MKCYNCGKKGH+KK+CW+LNKKD NP
Subjt:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP

A0A5D3CXA6 Uncharacterized protein2.0e-3577.78Show/hide
Query:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP
        VINLTNN+LTDYLSFDD+VA VLE++N+CKN ++KLVSSQQA+ L VTR    EC S+GS+NQGRSKS+SKKNMKCYNCGKKGH+KK+CWNLNKKDSNP
Subjt:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP

A0A5D3DE66 Polyprotein3.5e-2458.97Show/hide
Query:  LINFVINLTNNVLT------------DYLS--FDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKK
        + N  + L +NVL+            D+L+  FDD+VAAVLE++N+ KN ++KLVSSQQA+AL+V +    +  S+GS+NQGRSKSRSKKNMKCYNCGKK
Subjt:  LINFVINLTNNVLT------------DYLS--FDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKK

Query:  GHLKKDCWNLNKKDSNP
        GHLKK+CWNLNKK SNP
Subjt:  GHLKKDCWNLNKKDSNP

A0A6A3AUJ7 Uncharacterized protein1.3e-2357.76Show/hide
Query:  NMLNFYFKVFLTCLINFVINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKG
        N+LNFYFKV+   +    INLTN+ +T  L FDD+ AAVL+++N+ KN +++ V+ QQA+AL   R  S ECG + S   GRSKSRSK N+KCYNCG KG
Subjt:  NMLNFYFKVFLTCLINFVINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKG

Query:  HLKKDCWNLNKKDSNP
        HLKKDCW+LN K+SNP
Subjt:  HLKKDCWNLNKKDSNP

A0A6A6MLA0 CCHC-type domain-containing protein2.0e-2462.77Show/hide
Query:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNK
        +INLTNN+LTDYL F+D+ AAVLE++++ KN ++KL +SQQ +AL++ R  S E GS+GSQN  RSKSRSKKN KCY+CGK+GH+KKDCW+  K
Subjt:  VINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGCTAAACTTCTACTTCAAAGTCTTCCTGACTTGTTTGATCAACTTTGTCATCAATCTAACAAATAATGTTCTCACCGACTACCTAAGCTTTGATGATATTGT
AGCTGCTGTTCTAGAAGATAAAAATCAATGCAAGAACAACAAAGAAAAGTTGGTAAGTTCACAACAAGCAAAAGCATTGATGGTGACAAGAAGCATGTCAGCGGAGTGTG
GCTCAACTGGGAGCCAAAATCAAGGAAGGTCAAAATCAAGAAGTAAGAAGAACATGAAGTGCTACAATTGTGGAAAGAAGGGACATCTAAAGAAGGATTGTTGGAATCTA
AACAAGAAAGATTCCAATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACATGCTAAACTTCTACTTCAAAGTCTTCCTGACTTGTTTGATCAACTTTGTCATCAATCTAACAAATAATGTTCTCACCGACTACCTAAGCTTTGATGATATTGT
AGCTGCTGTTCTAGAAGATAAAAATCAATGCAAGAACAACAAAGAAAAGTTGGTAAGTTCACAACAAGCAAAAGCATTGATGGTGACAAGAAGCATGTCAGCGGAGTGTG
GCTCAACTGGGAGCCAAAATCAAGGAAGGTCAAAATCAAGAAGTAAGAAGAACATGAAGTGCTACAATTGTGGAAAGAAGGGACATCTAAAGAAGGATTGTTGGAATCTA
AACAAGAAAGATTCCAATCCTTAG
Protein sequenceShow/hide protein sequence
MNMLNFYFKVFLTCLINFVINLTNNVLTDYLSFDDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMSAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNL
NKKDSNP