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Clc11G09220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G09220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF2062 domain-containing protein
Genome locationClcChr11:11811717..11815148
RNA-Seq ExpressionClc11G09220
SyntenyClc11G09220
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037033.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa]1.6e-6289.51Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG  RPTSWF+QKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVICF--EVLLSAGH
        G RFPFTPDALKKVFTG+ASHEVLLSIAH++ F  +  +SA H
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVICF--EVLLSAGH
XP_004138658.1 uncharacterized protein LOC101220662 [Cucumis sativus]1.8e-6194.66Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG  R TSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
        G RFPFTPDALKKVFTG+ASHEVLLSIAH++
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
XP_008441199.1 PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo]7.9e-6294.66Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG  RPTSWF+QKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
        G RFPFTPDALKKVFTG+ASHEVLLSIAH++
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
XP_022939705.1 uncharacterized protein LOC111445511 isoform X2 [Cucurbita moschata]2.3e-6193.89Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG TRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFAIAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
        G RFPFTPDALKKVFTGQASHEVLLSIAHV+
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
XP_038886058.1 uncharacterized protein LOC120076335 [Benincasa hispida]3.2e-6396.95Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG  RPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
        GARFPFTPDA KKVFTGQASHEVLLSIAHV+
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
TrEMBL top hitse value%identityAlignment
A0A0A0LSU8 DUF2062 domain-containing protein8.6e-6294.66Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG  R TSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
        G RFPFTPDALKKVFTG+ASHEVLLSIAH++
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
A0A1S3B2V5 uncharacterized protein LOC1034854043.8e-6294.66Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG  RPTSWF+QKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
        G RFPFTPDALKKVFTG+ASHEVLLSIAH++
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
A0A5A7T257 E3 ubiquitin-protein ligase7.7e-6389.51Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG  RPTSWF+QKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVICF--EVLLSAGH
        G RFPFTPDALKKVFTG+ASHEVLLSIAH++ F  +  +SA H
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVICF--EVLLSAGH
A0A6J1FNH6 uncharacterized protein LOC111445511 isoform X21.1e-6193.89Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG TRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFAIAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
        G RFPFTPDALKKVFTGQASHEVLLSIAHV+
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
A0A6J1JYI3 uncharacterized protein LOC1114894501.5e-6193.89Show/hide
Query:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG
        MATVG TRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFAIAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISG
Subjt:  MATVGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISG

Query:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
        G RFPFTPDALKKVFTGQASHEVLLSIAHV+
Subjt:  GARFPFTPDALKKVFTGQASHEVLLSIAHVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33490.1 unknown protein2.4e-4868.97Show/hide
Query:  VGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGAR
        + + R   WF++KI +PL+QIL+RGAEPKQLAFSAALGIT+G+FPICGVTV LCG AIA LGSLCHAPTVMLANFIATPIELSLVVPFLR GE I+GG  
Subjt:  VGQTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGAR

Query:  FPFTPDALKKVFTGQASHEVLLSIAHVICFEVLLSAGHTIISCLI
        FP T DALKKVFTGQAS +V LSI + +    L++A   I++  I
Subjt:  FPFTPDALKKVFTGQASHEVLLSIAHVICFEVLLSAGHTIISCLI
AT4G10140.1 unknown protein1.2e-4775Show/hide
Query:  RPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGARFPFT
        R  +WFN+KI DPLLQIL+RG EPKQLAFSAALGITLG+FPICGV V LCG A A LGS CHAPTVMLAN IATP+EL+LVVPFLR GE ++GG  FP T
Subjt:  RPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGARFPFT

Query:  PDALKKVFTGQASHEVLLSIAHVI
         DALKKVFTGQAS EV LSI + +
Subjt:  PDALKKVFTGQASHEVLLSIAHVI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAACAAATCGATCGCCCCTAATCTGGTCGACGGTGGTCCACCGAACAGAAATCAAAAGAAATTATCGATCTTCTCTGGACTTCCGAGGAGGGGAAGGAATAATAT
TGTTGGAAGAGAAAGGTTACTGTTCTCTCATGGTCGTTCGACCAAATCCAGTTCAAGAGTGATCAACCACAAACAAAAGAATTGGCGTTTCTTCTTTTTCTGGGAGATTA
ATAGAGCTTTCTCAGAAATTTCCTTGGAGGTGAAGATGGCAACAGTAGGACAGACCCGTCCGACCAGTTGGTTTAACCAGAAGATCGTCGATCCTCTCCTCCAAATCCTC
CAAAGGGGTGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTAGGCATAACCCTGGGATTGTTTCCTATATGCGGGGTCACTGTATTCCTATGCGGGTTTGCTATTGC
ATTTCTTGGATCTCTTTGTCATGCTCCAACAGTGATGCTTGCTAACTTTATTGCTACTCCCATAGAATTGAGTTTGGTGGTGCCTTTCTTGCGCTTCGGTGAAGCTATTT
CTGGGGGAGCTCGTTTCCCATTTACACCTGATGCTTTGAAGAAAGTTTTCACTGGCCAAGCTTCGCATGAAGTACTATTGAGTATTGCTCATGTGATCTGTTTTGAAGTG
TTGTTATCAGCTGGGCACACAATAATAAGTTGCTTGATTCAAATTAATAAACTGGATGAAAGTTTTGTATCAATATTGGCAGTTGTTGGGATGGCTTGTTGCTGCACCCT
TTATTCTGGGCATTGGATATTTGTTGTTTTTACCATGTTTCAAGCTTTTGGTCCGCAAGTTCAGCGCCGTTGCTTCAAGTCCAAAGAAGTCACCTCGTTCACACTCAGAA
ATCAGACTGAAGGTGAGAGATGTCTGATTAAGGATCCCAGAAATGGTGCTGATCGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCAACAAATCGATCGCCCCTAATCTGGTCGACGGTGGTCCACCGAACAGAAATCAAAAGAAATTATCGATCTTCTCTGGACTTCCGAGGAGGGGAAGGAATAATAT
TGTTGGAAGAGAAAGGTTACTGTTCTCTCATGGTCGTTCGACCAAATCCAGTTCAAGAGTGATCAACCACAAACAAAAGAATTGGCGTTTCTTCTTTTTCTGGGAGATTA
ATAGAGCTTTCTCAGAAATTTCCTTGGAGGTGAAGATGGCAACAGTAGGACAGACCCGTCCGACCAGTTGGTTTAACCAGAAGATCGTCGATCCTCTCCTCCAAATCCTC
CAAAGGGGTGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTAGGCATAACCCTGGGATTGTTTCCTATATGCGGGGTCACTGTATTCCTATGCGGGTTTGCTATTGC
ATTTCTTGGATCTCTTTGTCATGCTCCAACAGTGATGCTTGCTAACTTTATTGCTACTCCCATAGAATTGAGTTTGGTGGTGCCTTTCTTGCGCTTCGGTGAAGCTATTT
CTGGGGGAGCTCGTTTCCCATTTACACCTGATGCTTTGAAGAAAGTTTTCACTGGCCAAGCTTCGCATGAAGTACTATTGAGTATTGCTCATGTGATCTGTTTTGAAGTG
TTGTTATCAGCTGGGCACACAATAATAAGTTGCTTGATTCAAATTAATAAACTGGATGAAAGTTTTGTATCAATATTGGCAGTTGTTGGGATGGCTTGTTGCTGCACCCT
TTATTCTGGGCATTGGATATTTGTTGTTTTTACCATGTTTCAAGCTTTTGGTCCGCAAGTTCAGCGCCGTTGCTTCAAGTCCAAAGAAGTCACCTCGTTCACACTCAGAA
ATCAGACTGAAGGTGAGAGATGTCTGATTAAGGATCCCAGAAATGGTGCTGATCGTTCTTAG
Protein sequenceShow/hide protein sequence
MRNKSIAPNLVDGGPPNRNQKKLSIFSGLPRRGRNNIVGRERLLFSHGRSTKSSSRVINHKQKNWRFFFFWEINRAFSEISLEVKMATVGQTRPTSWFNQKIVDPLLQIL
QRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGARFPFTPDALKKVFTGQASHEVLLSIAHVICFEV
LLSAGHTIISCLIQINKLDESFVSILAVVGMACCCTLYSGHWIFVVFTMFQAFGPQVQRRCFKSKEVTSFTLRNQTEGERCLIKDPRNGADRS