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Clc11G09690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G09690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionzinc finger protein 6-like
Genome locationClcChr11:12488550..12489019
RNA-Seq ExpressionClc11G09690
SyntenyClc11G09690
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578343.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]4.8e-5170.62Show/hide
Query:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP
        M  SQLKLFGFNIS+++K+VSNF EPP  E PES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LHVQNWLSSSF+P 
Subjt:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP

Query:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP
        P       AGL+AM     SQ+V RQAGV        GDE VPGR LGLDLQLSLGP KP
Subjt:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP

XP_022939247.1 zinc finger protein 6-like [Cucurbita moschata]7.0e-5069.38Show/hide
Query:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP
        M  SQLKLFGFNIS+++K+VSNF EPP  E PES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LH+ NWLSSSF P 
Subjt:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP

Query:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP
        P       AGL+AM     SQ+V RQAGV        GDE VPGR LGLDLQLSLGP KP
Subjt:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP

XP_022993371.1 zinc finger protein 6-like [Cucurbita maxima]9.1e-5069.38Show/hide
Query:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP
        M  SQLKLFGFNIS+ + +VSNF EPP  E PES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LHV+NWLSSSF+P 
Subjt:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP

Query:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP
        P       AGL+AM     SQ+V RQAGV        GDE VPGR LGLDLQLSLGP KP
Subjt:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP

XP_023550962.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]4.8e-5170.62Show/hide
Query:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP
        M  SQLKLFGFNIS+++K+VSNF EPP  E PES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LHVQNWLSSSF+P 
Subjt:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP

Query:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP
        P       AGL+AM     SQ+V RQAGV        GDE VPGR LGLDLQLSLGP KP
Subjt:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP

XP_038886238.1 zinc finger protein 6-like [Benincasa hispida]1.2e-5472.89Show/hide
Query:  MPKSQLKLFGFNISKENKTVSNFIE-PPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMP
        MPKS+LKLFGFNISKE KTVSN  + PPA+EWPES++ HAPKFECQYCCREFSNSQALGGHQNAHREERQLLK AQMKS H NY TALHVQNWLSSSF P
Subjt:  MPKSQLKLFGFNISKENKTVSNFIE-PPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMP

Query:  PPAG------------LYAM-----SQEVRRQA-------GVQGDEDVPGRSLGLDLQLSLGPGKP
        PP              +YAM     SQEVRRQA       GV GDEDV G SLGLDLQLSLGPGKP
Subjt:  PPAG------------LYAM-----SQEVRRQA-------GVQGDEDVPGRSLGLDLQLSLGPGKP

TrEMBL top hitse value%identityAlignment
A0A0A0LQ31 C2H2-type domain-containing protein1.9e-2473.17Show/hide
Query:  SQLKLFGFNISKENKTVSNFIEPP-AVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYF
        S LKLFGF+ISKENK VSNF EPP  VE PES++   PKFEC+YCCR+FSNSQALGGHQNAH+EERQLLK  Q+K +  NYF
Subjt:  SQLKLFGFNISKENKTVSNFIEPP-AVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYF

A0A1R3IC83 Zinc finger protein 69.9e-1853.06Show/hide
Query:  LKLFGFNISKENKTVSNFIEPP--AVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPPP
        LKLFGFNI +     ++  + P  +   PE ++  A K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM++     F++ H+ N + S+F PPP
Subjt:  LKLFGFNISKENKTVSNFIEPP--AVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPPP

A0A6J1FG99 zinc finger protein 6-like3.4e-5069.38Show/hide
Query:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP
        M  SQLKLFGFNIS+++K+VSNF EPP  E PES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LH+ NWLSSSF P 
Subjt:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP

Query:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP
        P       AGL+AM     SQ+V RQAGV        GDE VPGR LGLDLQLSLGP KP
Subjt:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP

A0A6J1JW51 zinc finger protein 6-like4.4e-5069.38Show/hide
Query:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP
        M  SQLKLFGFNIS+ + +VSNF EPP  E PES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LHV+NWLSSSF+P 
Subjt:  MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPP

Query:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP
        P       AGL+AM     SQ+V RQAGV        GDE VPGR LGLDLQLSLGP KP
Subjt:  P-------AGLYAM-----SQEVRRQAGV-------QGDEDVPGRSLGLDLQLSLGPGKP

A0A7J7E054 C2H2-type domain-containing protein1.3e-1739.46Show/hide
Query:  SQLKLFGFNISKENKTVSNF----------IEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWL
        ++LKLFGF++S++ +T + +            P +  +P S S    K+ECQYCCREF+NSQALGGHQNAH++ERQ LKRAQM++       A   +N +
Subjt:  SQLKLFGFNISKENKTVSNF----------IEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWL

Query:  SSSFMPPPAGLYAMSQEVRRQAGVQGDED---VPGRSLGLDLQLSLG
         S+F PPP  L      V   A   G      +P  + G    +S G
Subjt:  SSSFMPPPAGLYAMSQEVRRQAGVQGDED---VPGRSLGLDLQLSLG

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 82.6e-0749.12Show/hide
Query:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSW--HPNYFTALHVQNWLSS
        +FEC YC R F  SQALGGHQNAH+ ERQ  KR  M S+  H       H+  +L++
Subjt:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSW--HPNYFTALHVQNWLSS

Q39264 Zinc finger protein 51.1e-0840.91Show/hide
Query:  LKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPK-FECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPN--YFTALHVQ
        +KLFGF +   ++T              + SL   K  ECQYC +EF+NSQALGGHQNAH++ER   KR Q+++   +  Y+   H Q
Subjt:  LKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPK-FECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPN--YFTALHVQ

Q39265 Zinc finger protein 65.3e-1650Show/hide
Query:  SQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH--PNYFTALHVQNWLSSSFMPPP
        S LKLFG N+ +     +   EP       S+S    K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM +    P +       N L S+F P P
Subjt:  SQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH--PNYFTALHVQNWLSSSFMPPP

Q84WI0 Zinc finger protein GIS1.4e-0842.68Show/hide
Query:  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKR-AQMKSWHP--NYFTALHVQNWLSS-----------SFMPPPAGLY
        H  +FEC YC R F  SQALGGHQNAH+ ERQL KR      +HP  N ++  H  +W +            S  P P+G Y
Subjt:  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKR-AQMKSWHP--NYFTALHVQNWLSS-----------SFMPPPAGLY

Q9C9H1 Zinc finger protein GIS34.4e-1540.94Show/hide
Query:  SQLKLFGFNISKEN-------KTVSNFIEPPAVEWPESQSLHA---------------PKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH-
        S+LKLFGF++  E        KT  + + P   E+P   S  +                K+ECQYCCREF NSQALGGHQNAH++ERQ LKRAQ+++   
Subjt:  SQLKLFGFNISKEN-------KTVSNFIEPPAVEWPESQSLHA---------------PKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH-

Query:  --PNYFTA----LHVQNWLSSSFMPPP
           N+  A      ++N + S+F PPP
Subjt:  --PNYFTA----LHVQNWLSSSFMPPP

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 57.5e-1040.91Show/hide
Query:  LKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPK-FECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPN--YFTALHVQ
        +KLFGF +   ++T              + SL   K  ECQYC +EF+NSQALGGHQNAH++ER   KR Q+++   +  Y+   H Q
Subjt:  LKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPK-FECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPN--YFTALHVQ

AT1G67030.1 zinc finger protein 63.7e-1750Show/hide
Query:  SQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH--PNYFTALHVQNWLSSSFMPPP
        S LKLFG N+ +     +   EP       S+S    K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM +    P +       N L S+F P P
Subjt:  SQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH--PNYFTALHVQNWLSSSFMPPP

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein3.2e-1640.94Show/hide
Query:  SQLKLFGFNISKEN-------KTVSNFIEPPAVEWPESQSLHA---------------PKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH-
        S+LKLFGF++  E        KT  + + P   E+P   S  +                K+ECQYCCREF NSQALGGHQNAH++ERQ LKRAQ+++   
Subjt:  SQLKLFGFNISKEN-------KTVSNFIEPPAVEWPESQSLHA---------------PKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH-

Query:  --PNYFTA----LHVQNWLSSSFMPPP
           N+  A      ++N + S+F PPP
Subjt:  --PNYFTA----LHVQNWLSSSFMPPP

AT2G41940.1 zinc finger protein 81.9e-0849.12Show/hide
Query:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSW--HPNYFTALHVQNWLSS
        +FEC YC R F  SQALGGHQNAH+ ERQ  KR  M S+  H       H+  +L++
Subjt:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSW--HPNYFTALHVQNWLSS

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein9.8e-1042.68Show/hide
Query:  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKR-AQMKSWHP--NYFTALHVQNWLSS-----------SFMPPPAGLY
        H  +FEC YC R F  SQALGGHQNAH+ ERQL KR      +HP  N ++  H  +W +            S  P P+G Y
Subjt:  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKR-AQMKSWHP--NYFTALHVQNWLSS-----------SFMPPPAGLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAGTCTCAGCTGAAGCTTTTTGGCTTCAACATCTCAAAAGAGAATAAAACAGTTTCAAATTTTATAGAGCCGCCGGCGGTGGAGTGGCCGGAATCTCAAAGTCT
TCATGCCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTTTTGAAGAGGG
CTCAAATGAAATCTTGGCATCCTAATTACTTCACAGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCCTTTATGCCGCCGCCGGCGGGGCTCTACGCTATGTCGCAAGAG
GTGCGGCGGCAGGCCGGAGTTCAAGGAGACGAGGATGTTCCCGGTAGGAGTTTGGGCCTGGATTTACAGCTTAGCCTTGGGCCTGGTAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTCTCTCTATCATGCCTAAGTCTCAGCTGAAGCTTTTTGGCTTCAACATCTCAAAAGAGAATAAAACAGTTTCAAATTTTATAGAGCCGCCGGCGGTGGAGTGGCCGGA
ATCTCAAAGTCTTCATGCCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGC
TTTTGAAGAGGGCTCAAATGAAATCTTGGCATCCTAATTACTTCACAGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCCTTTATGCCGCCGCCGGCGGGGCTCTACGCT
ATGTCGCAAGAGGTGCGGCGGCAGGCCGGAGTTCAAGGAGACGAGGATGTTCCCGGTAGGAGTTTGGGCCTGGATTTACAGCTTAGCCTTGGGCCTGGTAAGCCTTGACT
TGGGCTTTTCCCGATTACGGCCCACAATGT
Protein sequenceShow/hide protein sequence
MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPPPAGLYAMSQE
VRRQAGVQGDEDVPGRSLGLDLQLSLGPGKP