; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G09720 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G09720
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein PCF11-like
Genome locationClcChr11:12512794..12513276
RNA-Seq ExpressionClc11G09720
SyntenyClc11G09720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939119.1 uncharacterized protein LOC111445119 [Cucurbita moschata]1.6e-7191.25Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS DPQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022993370.1 uncharacterized protein LOC111489414 [Cucurbita maxima]4.3e-7291.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNS DPQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]1.4e-7091.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S DPQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLTA N SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_023551541.1 uncharacterized protein LOC111809331 [Cucurbita pepo subsp. pepo]4.8e-7190.62Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS DPQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANT AAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_038885993.1 uncharacterized protein LOC120076298 [Benincasa hispida]1.1e-7293.75Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGSPT SP ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNS D QDVDD DDD+  MIPEKNEKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEE+EG LTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

TrEMBL top hitse value%identityAlignment
A0A6J1BYN1 uncharacterized protein LOC1110064619.7e-7091.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQC VAGSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNS DPQDVDD +DD  NMIPEKNEKEVRARRKLKDLFVSSPP +
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLTA+NTSAAGIG+ STTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1FG66 uncharacterized protein LOC1114451198.0e-7291.25Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS DPQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1H7N8 uncharacterized protein LOC1114609052.0e-7091.25Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S DPQDVDD DDD+ NMIPEKN+KEV+ARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLTA N SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JSX9 uncharacterized protein LOC1114875511.5e-7091.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S DPQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        D VSDRRIEEQEGLLTA NTSAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JYC4 uncharacterized protein LOC1114894142.1e-7291.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNS DPQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown1.4e-2043.35Show/hide
Query:  TLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE-
        +L KFKLLA+ C+       SPT SPVIHL  RRRKTLR+LL R +DR R P   N+ D     D               ++R+ RKL DLFVSSPP E 
Subjt:  TLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE-

Query:  -------DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE
               DK +   +E +  +     ++ AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Subjt:  -------DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE

AT1G68430.1 unknown protein4.2e-0935.54Show/hide
Query:  MATLHKFKLLASQCAVAG-SPT--PSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSP
        MATL +FK L +QC VA  SPT  PSP  SP++ L RR++ TL+MLL+     R        + Q +  H           + K+V A RKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAG-SPT--PSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSP

Query:  PLEDKVSD---RRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
          E++  +    + + +E +L A                   P+   F  R L+RAWRP L  I E
Subjt:  PLEDKVSD---RRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

AT5G16200.1 50S ribosomal protein-related1.4e-1539.29Show/hide
Query:  MATLHKFKLLAS----QCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVS
        ++ LHKFKL A+    + + AGSPT SPT SPV +L  RRRKTLRML ++ +D RR   +      Q +++  + + N   +K       RRKL++L V+
Subjt:  MATLHKFKLLAS----QCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVS

Query:  --SPPLEDKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE
          SPP + +     I E+   ++  N ++ G G   T RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  --SPPLEDKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCCAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCACTGATCCTCAAGATGTCGACGACCACGACGACGATAACCACAATA
TGATTCCGGAGAAAAACGAGAAGGAAGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGAGAATCGAAGAA
CAGGAGGGATTGTTAACGGCGGCCAACACCAGCGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCAATCTCGGCCACATTTCGGTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCCAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCACTGATCCTCAAGATGTCGACGACCACGACGACGATAACCACAATA
TGATTCCGGAGAAAAACGAGAAGGAAGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGAGAATCGAAGAA
CAGGAGGGATTGTTAACGGCGGCCAACACCAGCGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCAATCTCGGCCACATTTCGGTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEE
QEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE