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Clc11G09940 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G09940
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutaredoxin
Genome locationClcChr11:12870549..12871158
RNA-Seq ExpressionClc11G09940
SyntenyClc11G09940
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0048653 - anther development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002109 - Glutaredoxin
IPR011905 - Glutaredoxin-like, plant II
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN63349.2 hypothetical protein Csa_022404 [Cucumis sativus]4.4e-6496.77Show/hide
Query:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM
        MHYQTTPSWGCYMSTS+LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVP+VFIGGKLVGAM
Subjt:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM

Query:  DRVMASHISGTLVPLLKDAGALWL
        DRVMASHISGTLVPLLKDAGALWL
Subjt:  DRVMASHISGTLVPLLKDAGALWL

XP_008441305.1 PREDICTED: glutaredoxin-C1 [Cucumis melo]7.5e-6495.97Show/hide
Query:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM
        MHYQTTPSWGCYMSTS LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVP+VF+GGKLVGAM
Subjt:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM

Query:  DRVMASHISGTLVPLLKDAGALWL
        DRVMASHISGTLVPLLKDAGALWL
Subjt:  DRVMASHISGTLVPLLKDAGALWL

XP_022939500.1 glutaredoxin-C1 [Cucurbita moschata]3.3e-5990.4Show/hide
Query:  MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA
        MHYQTTPSWGCYM +T+A+EDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNPTV+ELDEDPRGG+MEKALM LLG+SS VP+VFIGGKLVGA
Subjt:  MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA

Query:  MDRVMASHISGTLVPLLKDAGALWL
        MDRVMASHISGTLVPLLKDAGALWL
Subjt:  MDRVMASHISGTLVPLLKDAGALWL

XP_023551484.1 glutaredoxin-C1-like [Cucurbita pepo subsp. pepo]1.5e-5991.2Show/hide
Query:  MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA
        MHYQTTPSWGCYM +T+ALEDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNPTV+ELDEDPRGG+MEKALM LLG+SS VP+VFIGGKLVGA
Subjt:  MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA

Query:  MDRVMASHISGTLVPLLKDAGALWL
        MDRVMASHISGTLVPLLKDAGALWL
Subjt:  MDRVMASHISGTLVPLLKDAGALWL

XP_038886351.1 glutaredoxin-C1 [Benincasa hispida]1.3e-6395.97Show/hide
Query:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM
        MHYQTTPSWGCY+STSALEDP+ERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVP+VFIGGKLVGAM
Subjt:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM

Query:  DRVMASHISGTLVPLLKDAGALWL
        DRVMASHI+GTLVPLLKD GALWL
Subjt:  DRVMASHISGTLVPLLKDAGALWL

TrEMBL top hitse value%identityAlignment
A0A0A0LMK1 Glutaredoxin domain-containing protein2.1e-6496.77Show/hide
Query:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM
        MHYQTTPSWGCYMSTS+LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVP+VFIGGKLVGAM
Subjt:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM

Query:  DRVMASHISGTLVPLLKDAGALWL
        DRVMASHISGTLVPLLKDAGALWL
Subjt:  DRVMASHISGTLVPLLKDAGALWL

A0A1S3B356 glutaredoxin-C13.6e-6495.97Show/hide
Query:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM
        MHYQTTPSWGCYMSTS LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVP+VF+GGKLVGAM
Subjt:  MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAM

Query:  DRVMASHISGTLVPLLKDAGALWL
        DRVMASHISGTLVPLLKDAGALWL
Subjt:  DRVMASHISGTLVPLLKDAGALWL

A0A6J1BY71 glutaredoxin-C1-like1.6e-5687.2Show/hide
Query:  MHYQTTPSWGCYMSTSAL-EDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA
        MHYQT   WGCY+  +A  EDP+ERI+RLAAENAVVIFS+STCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLG+SS VP+VFIGGKLVGA
Subjt:  MHYQTTPSWGCYMSTSAL-EDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA

Query:  MDRVMASHISGTLVPLLKDAGALWL
        MDRVMASHISG+LVPLLKDAGALWL
Subjt:  MDRVMASHISGTLVPLLKDAGALWL

A0A6J1FMV7 glutaredoxin-C11.6e-5990.4Show/hide
Query:  MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA
        MHYQTTPSWGCYM +T+A+EDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNPTV+ELDEDPRGG+MEKALM LLG+SS VP+VFIGGKLVGA
Subjt:  MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA

Query:  MDRVMASHISGTLVPLLKDAGALWL
        MDRVMASHISGTLVPLLKDAGALWL
Subjt:  MDRVMASHISGTLVPLLKDAGALWL

A0A6J1K0D7 glutaredoxin-C1-like1.6e-5990.4Show/hide
Query:  MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA
        MHYQTTPSWGCYM +T+A+EDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNPTV+ELDEDPRGG+MEKALM LLG+SS VP+VFIGGKLVGA
Subjt:  MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGA

Query:  MDRVMASHISGTLVPLLKDAGALWL
        MDRVMASHISGTLVPLLKDAGALWL
Subjt:  MDRVMASHISGTLVPLLKDAGALWL

SwissProt top hitse value%identityAlignment
Q0JDM4 Glutaredoxin-C51.9e-4170.8Show/hide
Query:  SALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLG----SSSPVPIVFIGGKLVGAMDRVMASHISGT
        +A E   ER+ERLA+E+AVV+FSVS+CCMCHA+KRLFCGMGV+P V+ELD DPRG D+E+AL RL+G    +++ VP+VFIGGKLVGAMDRVMA+HI+G+
Subjt:  SALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLG----SSSPVPIVFIGGKLVGAMDRVMASHISGT

Query:  LVPLLKDAGALWL
        LVPLLK+AGALWL
Subjt:  LVPLLKDAGALWL

Q6K609 Glutaredoxin-C31.1e-4162.22Show/hide
Query:  MHYQTTPSWGCYMSTSA----LEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSP-------VPI
        M Y        YM  +A    +E  + R+ERLA+E+AVV+FSVS+CCMCHA+KRLFCGMGV+PTV+ELD DPRG ++E+AL RL+G   P       VP+
Subjt:  MHYQTTPSWGCYMSTSA----LEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSP-------VPI

Query:  VFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL
        VFIGGKLVGAMDRVMA+HI+G+LVPLLK+AGALWL
Subjt:  VFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL

Q7G8Y5 Glutaredoxin-C12.1e-3768.93Show/hide
Query:  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGA
        ++R+ RLAA+ AVVIFS+S+CCMCH + RLFC +GVNPTV ELDEDPRG +MEKAL RLLG S  VP VFIGG+LVG+ D+VM+ H+SG LVPLL++AGA
Subjt:  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGA

Query:  LWL
        LW+
Subjt:  LWL

Q8LF89 Glutaredoxin-C86.2e-3769.64Show/hide
Query:  DPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSS-------PVPIVFIGGKLVGAMDRVMASHISGTL
        + L +IE +AAENAVVIFSVSTCCMCHAIKRLF GMGV+P V+ELD  P G ++ +AL+RLLG SS        +P+VFIGGK+VGAM+RVMASHI+G+L
Subjt:  DPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSS-------PVPIVFIGGKLVGAMDRVMASHISGTL

Query:  VPLLKDAGALWL
        VPLLKDAGALWL
Subjt:  VPLLKDAGALWL

Q96305 Glutaredoxin-C79.2e-4166.42Show/hide
Query:  MHYQTTPSWGCYMSTS--------ALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--V
        M YQ T SWG Y  +S          +  L RIE LA+E+AVVIFSVSTCCMCHA+K LF GMGV+P V+ELD  P GGD+++AL+RLL   GSSSP  +
Subjt:  MHYQTTPSWGCYMSTS--------ALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--V

Query:  PIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL
        P+VFIGGKLVGAMDRVMASHI+G+LVPLLKDAGALWL
Subjt:  PIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL

Arabidopsis top hitse value%identityAlignment
AT2G47870.1 Thioredoxin superfamily protein9.2e-2850.49Show/hide
Query:  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGA
        +ER+  LA+E A VIF+ S+CCMCH+IK LF  +G +P ++ELD+DP+G DME+AL R+ GS+  VP VF+GG+ VG+   V++ H+ G+L  +LK + A
Subjt:  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGA

Query:  LWL
        +WL
Subjt:  LWL

AT3G02000.1 Thioredoxin superfamily protein6.6e-4266.42Show/hide
Query:  MHYQTTPSWGCYMSTS--------ALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--V
        M YQ T SWG Y  +S          +  L RIE LA+E+AVVIFSVSTCCMCHA+K LF GMGV+P V+ELD  P GGD+++AL+RLL   GSSSP  +
Subjt:  MHYQTTPSWGCYMSTS--------ALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--V

Query:  PIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL
        P+VFIGGKLVGAMDRVMASHI+G+LVPLLKDAGALWL
Subjt:  PIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL

AT4G15670.1 Thioredoxin superfamily protein1.6e-2752.43Show/hide
Query:  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGA
        +E+++++ +E ++VIFS ++CCM H IK LF  +GVNPT+YELDE  RG ++E+AL + LG S  VP+VFIGG+LVG  ++VM+ H++ +L+P+LK  GA
Subjt:  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGA

Query:  LWL
        LWL
Subjt:  LWL

AT4G15700.1 Thioredoxin superfamily protein5.4e-2855.34Show/hide
Query:  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGA
        +E ++++ +E +VVIFS ++CCM H IK LF  +GVNPT+YELDE  RG ++E AL + LG S  VP+VFIGG+LVG  ++VM+ H++ +LVP+LK AGA
Subjt:  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGA

Query:  LWL
        LWL
Subjt:  LWL

AT5G14070.1 Thioredoxin superfamily protein4.4e-3869.64Show/hide
Query:  DPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSS-------PVPIVFIGGKLVGAMDRVMASHISGTL
        + L +IE +AAENAVVIFSVSTCCMCHAIKRLF GMGV+P V+ELD  P G ++ +AL+RLLG SS        +P+VFIGGK+VGAM+RVMASHI+G+L
Subjt:  DPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSS-------PVPIVFIGGKLVGAMDRVMASHISGTL

Query:  VPLLKDAGALWL
        VPLLKDAGALWL
Subjt:  VPLLKDAGALWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTATCAAACCACTCCATCTTGGGGTTGTTACATGTCCACATCCGCCCTCGAGGATCCGCTAGAGCGGATAGAGCGGTTAGCAGCCGAGAATGCGGTGGTTATATT
TAGCGTTAGTACGTGTTGCATGTGTCATGCTATAAAGCGGTTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTATGAACTTGACGAAGACCCCAGAGGAGGAGACATGG
AGAAGGCACTCATGAGGCTTTTGGGAAGCTCCTCTCCTGTCCCCATTGTGTTCATCGGTGGTAAACTTGTCGGTGCAATGGATAGAGTCATGGCCTCTCATATCAGTGGA
ACTCTTGTTCCTCTCCTTAAAGACGCTGGAGCTCTCTGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
CCATCTTTTGCGTTTTGTGTTCTTGTGTGGGAAGCAAACATGCATTATCAAACCACTCCATCTTGGGGTTGTTACATGTCCACATCCGCCCTCGAGGATCCGCTAGAGCG
GATAGAGCGGTTAGCAGCCGAGAATGCGGTGGTTATATTTAGCGTTAGTACGTGTTGCATGTGTCATGCTATAAAGCGGTTGTTTTGTGGAATGGGAGTGAATCCAACAG
TCTATGAACTTGACGAAGACCCCAGAGGAGGAGACATGGAGAAGGCACTCATGAGGCTTTTGGGAAGCTCCTCTCCTGTCCCCATTGTGTTCATCGGTGGTAAACTTGTC
GGTGCAATGGATAGAGTCATGGCCTCTCATATCAGTGGAACTCTTGTTCCTCTCCTTAAAGACGCTGGAGCTCTCTGGCTTTGACTATAATCTCTCTAGAAAAATTTATT
CGTAGAGGTTAGAGGAATGTGACTGACAATTCTATACCGTTGCAGGTAGAGGGACAAATTAAAATTTATAATTTGACCTACCTCCAATGATTTAGATGAGACAGTTACCC
TAAATCTATCTCAATGAATAATTTTTCATTTTACTCAATTATTATGCAAACCAAGGGAAA
Protein sequenceShow/hide protein sequence
MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISG
TLVPLLKDAGALWL