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Clc11G10050 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G10050
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMitotic-spindle organizing protein 1
Genome locationClcChr11:13545309..13546935
RNA-Seq ExpressionClc11G10050
SyntenyClc11G10050
Gene Ontology termsGO:0033566 - gamma-tubulin complex localization (biological process)
GO:0051415 - microtubule nucleation by interphase microtubule organizing center (biological process)
GO:0090307 - mitotic spindle assembly (biological process)
GO:0000931 - gamma-tubulin large complex (cellular component)
GO:0005819 - spindle (cellular component)
GO:0031021 - interphase microtubule organizing center (cellular component)
InterPro domainsIPR022214 - Mitotic-spindle organizing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598967.1 ALBINO3-like protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.5e-2891.89Show/hide
Query:  ILQMDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS
        IL MDPEAARTARESLDLAFHM NVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL  EPPSSET++SGNKS
Subjt:  ILQMDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS

XP_008441751.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo]8.7e-2692.96Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS
        MD EAARTARESLDLAFHMSNVLD+GIDRHTLSVLIALCDMGVNPEALAAVVKELR EPPSSET VS NKS
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS

XP_011649034.1 mitotic-spindle organizing protein 1A [Cucumis sativus]1.8e-2692.96Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS
        MD EAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELR EPPSS+T+VS NKS
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS

XP_022973921.1 mitotic-spindle organizing protein 1B-like [Cucurbita maxima]2.7e-2794.37Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS
        MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL  EPPSSET+ SGNKS
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS

XP_038889535.1 mitotic-spindle organizing protein 1B [Benincasa hispida]2.1e-2797.14Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNK
        MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELR EPPSSETVVS NK
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNK

TrEMBL top hitse value%identityAlignment
A0A0A0LMZ6 Uncharacterized protein8.5e-2792.96Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS
        MD EAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELR EPPSS+T+VS NKS
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS

A0A1S3B468 mitotic-spindle organizing protein 1A-like4.2e-2692.96Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS
        MD EAARTARESLDLAFHMSNVLD+GIDRHTLSVLIALCDMGVNPEALAAVVKELR EPPSSET VS NKS
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS

A0A5D3D1N9 Mitotic-spindle organizing protein 1A-like2.1e-2590.28Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVS-GNKS
        MD EAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELR EPP+SET++S  NKS
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVS-GNKS

A0A6J1I8U7 mitotic-spindle organizing protein 1B-like1.3e-2794.37Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS
        MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL  EPPSSET+ SGNKS
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS

A0A6J1I9X9 mitotic-spindle organizing protein 1B-like1.4e-2486.96Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGN
        MDPEAARTARESLDLAFH+SN+L+ GIDRHTLSVLIALCDMGVNPEALAAVVKELR EPPSSE ++S N
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGN

SwissProt top hitse value%identityAlignment
A9NKD9 Mitotic-spindle organizing protein 12.2e-1675.86Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWE
        MD  AA+ ARESLDLAF +SN L  G+DRHTLS+LIALC+ GVNPEALAAVVKELR E
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWE

B5FXZ4 Mitotic-spindle organizing protein 11.3e-0851.06Show/hide
Query:  RESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELR
        RE++D+ F +S +L+ G+D  TLS+ + LC+ G+NPEAL++V+KELR
Subjt:  RESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELR

Q08AG7 Mitotic-spindle organizing protein 15.0e-0838.03Show/hide
Query:  GASSDVASALVHILQMDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELR
        GA +  A+A  ++           RE++D+   +S +L+ G+D  TLS+ + LC+ G+NPEAL++V+KELR
Subjt:  GASSDVASALVHILQMDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELR

Q9C9T3 Mitotic-spindle organizing protein 1A1.2e-1766.67Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVV
        M+ EAA TARESL+L F MSN+L+ G+DRHTLSVLIALCD+G+NPEALA +VKELR +  ++ T V
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVV

Q9M0N8 Mitotic-spindle organizing protein 1B2.8e-1976.92Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEP-PSSET
        MD EA+RTARESL+L F MSN+LD G+DRHTLSVLIALCD+GVNPEALA VVKELR E  P S T
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEP-PSSET

Arabidopsis top hitse value%identityAlignment
AT1G73790.1 Protein of unknown function (DUF3743)8.4e-1966.67Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVV
        M+ EAA TARESL+L F MSN+L+ G+DRHTLSVLIALCD+G+NPEALA +VKELR +  ++ T V
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVV

AT4G09550.1 AtGCP3 interacting protein 12.0e-2076.92Show/hide
Query:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEP-PSSET
        MD EA+RTARESL+L F MSN+LD G+DRHTLSVLIALCD+GVNPEALA VVKELR E  P S T
Subjt:  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEP-PSSET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTAAGTTACCCACTCCTTTTTCGTCATAGCATCTTGATTTCGAAGGTGTTTGATTCGCTGTCCAACGAGATCAAGATAGTTTTAGGACGTATTGGTGTATATTG
GTTGGAACCATTGTTTAAGGTTTTGAAGTGCTATGGGGCTAGTAGTGATGTTGCTTCTGCATTAGTTCATATTCTCCAAATGGATCCAGAGGCTGCACGAACTGCTCGGG
AATCACTAGACCTTGCATTTCATATGTCTAACGTACTTGATGCAGGGATCGATCGGCACACTCTCTCTGTCCTCATTGCTCTTTGTGACATGGGTGTGAACCCTGAAGCA
CTGGCTGCTGTTGTCAAGGAACTACGCTGGGAGCCACCCTCATCAGAGACCGTCGTCTCCGGCAACAAGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTAAGTTACCCACTCCTTTTTCGTCATAGCATCTTGATTTCGAAGGTGTTTGATTCGCTGTCCAACGAGATCAAGATAGTTTTAGGACGTATTGGTGTATATTG
GTTGGAACCATTGTTTAAGGTTTTGAAGTGCTATGGGGCTAGTAGTGATGTTGCTTCTGCATTAGTTCATATTCTCCAAATGGATCCAGAGGCTGCACGAACTGCTCGGG
AATCACTAGACCTTGCATTTCATATGTCTAACGTACTTGATGCAGGGATCGATCGGCACACTCTCTCTGTCCTCATTGCTCTTTGTGACATGGGTGTGAACCCTGAAGCA
CTGGCTGCTGTTGTCAAGGAACTACGCTGGGAGCCACCCTCATCAGAGACCGTCGTCTCCGGCAACAAGTCATAAGTTCCCCAAGCAAAGAAACAACTCTTTTCTTCTTC
TGTTGAAGGTGGCTAAACACATCTATATGTTCTTAAACCACTTCCCTATATGTGTAGCTTACTTGGATATTGTGATAGATGGCTTTTGGTGTTTAGAATGTTGAAGTATT
CGCTCTCTTGTGTTCAGCCCTTCTGCCCTATTTTGTTGCTTTGCAGATTGCATGTTTAGCTGATTTTGTCAAGATAACAGAATGACACACATGTATATATTTGTCCCACA
GATTCAAGATCTGTTGGAATGAAGGTGAGGGAGCATTGTAACATTTGTTTTTAGACAAGAAAATATATGTTTGATATGAAAAAAAATGGGTAATGAGAACAGTA
Protein sequenceShow/hide protein sequence
MRLSYPLLFRHSILISKVFDSLSNEIKIVLGRIGVYWLEPLFKVLKCYGASSDVASALVHILQMDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEA
LAAVVKELRWEPPSSETVVSGNKS