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Clc11G10190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G10190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBnaUnng02390D protein
Genome locationClcChr11:15008784..15009837
RNA-Seq ExpressionClc11G10190
SyntenyClc11G10190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF2074992.1 unnamed protein product [Brassica napus]4.0e-0788.24Show/hide
Query:  LRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        L +LPFIRFAGAAQHIAGSQR+HTTCLT RSEGP
Subjt:  LRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

CAN71466.1 hypothetical protein VITISV_038987 [Vitis vinifera]3.9e-1060.71Show/hide
Query:  LRKQAKSKL-CQKQDEEAELSYKREGEREAKLSEL-SAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        LR+  KS + C+   E+ ELS  REG REAKLSEL  A   + +     F  +LPFIRFAGAAQHIAGSQRA TTCLT RSEGP
Subjt:  LRKQAKSKL-CQKQDEEAELSYKREGEREAKLSEL-SAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

CDY67692.1 BnaUnng02390D [Brassica napus]3.4e-0651.11Show/hide
Query:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        SE    P R Q++  LC       A LS K E E + KL+                L +LPFIRFAGAAQHIAGSQRAHTTCLT RSEGP
Subjt:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

KAF3949769.1 hypothetical protein CMV_024395 [Castanea mollissima]2.6e-0654.22Show/hide
Query:  LRKQAKSKL-CQKQDEEAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        LR+  KS + C+   E+  L   REG    KLSEL              L +LPFIRFAGAAQ IAGSQRAHTTCLTPR EGP
Subjt:  LRKQAKSKL-CQKQDEEAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

QHN82804.1 uncharacterized protein DS421_20g699020 [Arachis hypogaea]2.5e-0965.45Show/hide
Query:  EAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        E+K+  L+A  P+ +  +   L +LPFIRFAGAAQHIAG QRAHTTCLTPRSEGP
Subjt:  EAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

TrEMBL top hitse value%identityAlignment
A0A078JJS1 BnaUnng01810D protein (Fragment)1.6e-0651.11Show/hide
Query:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        SE    P R Q++  LC       A LS K E E + KL+                L +LPFIRFAGAAQHIAGSQRAHTTCLT RSEGP
Subjt:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

A0A078JQM0 BnaUnng02390D protein1.6e-0651.11Show/hide
Query:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        SE    P R Q++  LC       A LS K E E + KL+                L +LPFIRFAGAAQHIAGSQRAHTTCLT RSEGP
Subjt:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

A0A3P6D1Z3 Uncharacterized protein1.6e-0651.11Show/hide
Query:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        SE    P R Q++  LC       A LS K E E + KL+                L +LPFIRFAGAAQHIAGSQRAHTTCLT RSEGP
Subjt:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

A0A3P6H9H9 Uncharacterized protein1.6e-0651.11Show/hide
Query:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        SE    P R Q++  LC       A LS K E E + KL+                L +LPFIRFAGAAQHIAGSQRAHTTCLT RSEGP
Subjt:  SEKDFQPLRKQAKSKLCQKQDE-EAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

A5AMW1 Uncharacterized protein1.9e-1060.71Show/hide
Query:  LRKQAKSKL-CQKQDEEAELSYKREGEREAKLSEL-SAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP
        LR+  KS + C+   E+ ELS  REG REAKLSEL  A   + +     F  +LPFIRFAGAAQHIAGSQRA TTCLT RSEGP
Subjt:  LRKQAKSKL-CQKQDEEAELSYKREGEREAKLSEL-SAGRPLHKPLASSFLRQLPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCATTTGGATCGACGAGCTTTTTCAGCCCCAAAACTCAGAATCAATGGAATGAATCCGCATATCCGCTGCGCTCAATATGCGGGATTTCTGTTGGATCTGATCTT
TCGGGAAGCTTTTGGACCTAGCGAAAAGGACTTTCAGCCTTTGCGCAAGCAAGCAAAGTCGAAGCTTTGCCAGAAGCAAGACGAGGAAGCGGAGCTGTCGTATAAACGGG
AGGGGGAGAGGGAAGCGAAGCTTAGCGAGCTTTCCGCCGGCCGACCACTACATAAGCCGCTGGCGTCGAGCTTTCTCCGCCAGCTTCCTTTCATTCGCTTCGCGGGAGCC
GCACAGCACATAGCTGGAAGTCAGAGGGCCCATACTACCTGCCTAACCCCTCGCTCCGAGGGACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCATTTGGATCGACGAGCTTTTTCAGCCCCAAAACTCAGAATCAATGGAATGAATCCGCATATCCGCTGCGCTCAATATGCGGGATTTCTGTTGGATCTGATCTT
TCGGGAAGCTTTTGGACCTAGCGAAAAGGACTTTCAGCCTTTGCGCAAGCAAGCAAAGTCGAAGCTTTGCCAGAAGCAAGACGAGGAAGCGGAGCTGTCGTATAAACGGG
AGGGGGAGAGGGAAGCGAAGCTTAGCGAGCTTTCCGCCGGCCGACCACTACATAAGCCGCTGGCGTCGAGCTTTCTCCGCCAGCTTCCTTTCATTCGCTTCGCGGGAGCC
GCACAGCACATAGCTGGAAGTCAGAGGGCCCATACTACCTGCCTAACCCCTCGCTCCGAGGGACCGTAG
Protein sequenceShow/hide protein sequence
MIHLDRRAFSAPKLRINGMNPHIRCAQYAGFLLDLIFREAFGPSEKDFQPLRKQAKSKLCQKQDEEAELSYKREGEREAKLSELSAGRPLHKPLASSFLRQLPFIRFAGA
AQHIAGSQRAHTTCLTPRSEGP