CuGenDBv2

Gene ID	Clc11G10200
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	NADH-ubiquinone oxidoreductase chain 4
Genome location	ClcChr11:15010668..15011419
RNA-Seq Expression	Clc11G10200
Synteny	Clc11G10200
Gene Ontology terms	GO:0042773 - ATP synthesis coupled electron transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0031966 - mitochondrial membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPR003918 - NADH:ubiquinone oxidoreductase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AZP40305.1 NADH dehydrogenase subunit 4 [Cucumis melo var. momordica]

1.4e-64

99.28

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

KAA0033212.1 NADH dehydrogenase subunit 4 [Cucumis melo var. makuwa]

1.7e-65

90.32

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPG
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI    R    + P+ + G
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPG

QVG61400.1 NADH dehydrogenase subunit 4 [Fagus sylvatica]

3.7e-65

86.42

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLC+TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPGREWGTAL
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI    R    + P+ + G+  G ++
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPGREWGTAL

YP_004849354.1 NADH dehydrogenase subunit 4 [Cucumis sativus]

1.4e-64

99.28

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

YP_009913636.1 NADH dehydrogenase subunit 4 [Luffa acutangula]

4.8e-65

100

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

TrEMBL top hits

e value

%identity

Alignment

A0A3S9JII3 NADH-ubiquinone oxidoreductase chain 4

6.8e-65

99.28

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

A0A5A7SPU7 NADH dehydrogenase subunit 4 (Mitochondrion)

8.1e-66

90.32

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPG
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI    R    + P+ + G
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPG

A0A7D5Y3R4 NADH-ubiquinone oxidoreductase chain 4

2.3e-65

100

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

G3EJ06 NADH-ubiquinone oxidoreductase chain 4

6.8e-65

99.28

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

G3EU35 NADH-ubiquinone oxidoreductase chain 4

6.8e-65

99.28

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

SwissProt top hits

e value

%identity

Alignment

P26848 NADH-ubiquinone oxidoreductase chain 4

8.3e-60

90.58

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAIL I  QTGTTDLQI LTTEFSERRQI LWIA FASF+VKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGT+GFLRFSIPMFPEATL  TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLS IAIIYTSLTT RQIDLKKIIAYSSVAHMN VTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

P27572 NADH-ubiquinone oxidoreductase chain 4

9.5e-64

95.65

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLILLQTGTTDLQI LTTEFSERRQI LWIA FASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGT+GFLRFSIPMFPEATLC TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTT RQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

P93313 NADH-ubiquinone oxidoreductase chain 4

1.6e-63

94.93

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLIL QTGTTDLQI LTTEFSERRQIFLWIA FASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLK GT+GFLRFSIPMFPEATLC TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTT RQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

Q04050 NADH-ubiquinone oxidoreductase chain 4

7.8e-66

97.1

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Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLIL QTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI LK GTHGFLRFSIPMFPEATLC+TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

Q37617 NADH-ubiquinone oxidoreductase chain 4

1.4e-51

78.26

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLI  QTGT D+++   ++FSE RQ  LW+A FASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGT+GFLRFSIP+FP A +  TP I
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YT+S IAI+YTS TT RQIDLKKIIAYSSVAHMN VTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

Arabidopsis top hits

e value

%identity

Alignment

ATCG01050.1 NADH-Ubiquinone/plastoquinone (complex I) protein

1.6e-18

37.23

Show/hide

Query:  LLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIY
        +L I L      T +L++     +    +I  +I    +FAVK P++P+H WLP+ H EA  +  ++LAGILLK+G +G +R ++ + P A    +P++ 
Subjt:  LLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIY

Query:  TLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
         +  I IIY + T+  Q +LKK IAYSSV+HM  + I
Subjt:  TLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

ATMG00580.1 NADH dehydrogenase subunit 4

5.5e-67

97.1

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI
        MLLAILLIL QTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI LK GTHGFLRFSIPMFPEATLC+TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTATTAGCTATTCTGTTGATTCTTCTCCAAACAGGAACCACCGATTTACAAATATCATTAACCACAGAATTTAGTGAGCGGCGCCAAATCTTTCTATGGATTGCTTC
TTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTACCCGAAGCTCATGTAGAGGCACCTACGGCAGGATCCGTCATCTTGGCAGGAATTCTTT
TAAAATTGGGAACCCACGGGTTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCGACACTTTGTGCCACTCCTTTCATTTATACTCTAAGCGCGATTGCTATAATATAT
ACTTCCTTGACCACTTCAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGCAAAACACTGCCGTCTGTTCCAAAA
ACAAAAGCCCCTTAGCGCCCCGGGACGGGAGTGGGGGACGGCCCTACGCGCAGGCAACAGCAGCACCAGCTCTACGAAGTCAGAATCGAATCTTTCTGTTGGCTTTCCCA
ATTCATTCGTGAATCAGAATGAAAGGGCTAGAAGCGAGCGCTTCTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIY
TSLTTSRQIDLKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPGREWGTALRAGNSSTSSTKSESNLSVGFPNSFVNQNERARSERF

Clc11G10200 (gene) of Watermelon (cordophanus) v2 genome