; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G10210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G10210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNADH-ubiquinone oxidoreductase chain 4
Genome locationClcChr11:15012844..15014089
RNA-Seq ExpressionClc11G10210
SyntenyClc11G10210
Gene Ontology termsGO:0015990 - electron transport coupled proton transport (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048039 - ubiquinone binding (molecular function)
InterPro domainsIPR003918 - NADH:ubiquinone oxidoreductase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHJ81038.1 orf175 [Panax ginseng]2.7e-7798.04Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SITPLFIPNSRIRPIRLIGLCASLITFLYPPV RIQFDPSTAKSQFVESLRWLPYENI+FYLGIDGISLFFVILTTFLIPICI VGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

KAG6621658.1 hypothetical protein I3842_Q007500 [Carya illinoinensis]9.9e-80100Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

KAG6736845.1 hypothetical protein POTOM_060230 [Populus tomentosa]1.5e-8378.18Show/hide
Query:  MMLNRNRARSRGQPLCWLFETKALIGMVQIPMFFRVSFGFESLPLPVPYSSFDSRHPGF-------FFRSITPLFIPNSRIRPIRLIGLCASLITFLYPP
        MMLNR++ R RG PLCWLFETKALIGM   P+F  +S    +L        F   +             SITPLFIPNSRIRPIRLIGLCASLITFLY P
Subjt:  MMLNRNRARSRGQPLCWLFETKALIGMVQIPMFFRVSFGFESLPLPVPYSSFDSRHPGF-------FFRSITPLFIPNSRIRPIRLIGLCASLITFLYPP

Query:  VPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVPIPM
         PRIQFDPSTAKSQFVESLRWLPYENI+F LGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITASLIREFLMIAVFRMLD LLFYVLPESV IPM
Subjt:  VPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVPIPM

Query:  LCGAEHLLFAGIKLFLCRGL
        LCGAEHLLFAGIKLFLCRGL
Subjt:  LCGAEHLLFAGIKLFLCRGL

PKI40740.1 hypothetical protein CRG98_038878 [Punica granatum]4.2e-7898.69Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SITPLFIPNSRIRPIRLIGLCASLITFLYP VPRIQFDPSTAKSQFVESL+WLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

PRQ15634.1 putative NADH:ubiquinone reductase (H(+)-translocating) [Rosa chinensis]3.5e-7798.04Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SI PLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICI VGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYVLPESV IPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

TrEMBL top hitse value%identityAlignment
A0A096XFA7 Orf1751.3e-7798.04Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SITPLFIPNSRIRPIRLIGLCASLITFLYPPV RIQFDPSTAKSQFVESLRWLPYENI+FYLGIDGISLFFVILTTFLIPICI VGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

A0A2I0IAQ2 Uncharacterized protein2.0e-7898.69Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SITPLFIPNSRIRPIRLIGLCASLITFLYP VPRIQFDPSTAKSQFVESL+WLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

A0A2P6P132 Putative NADH:ubiquinone reductase (H(+)-translocating)1.7e-7798.04Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SI PLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICI VGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYVLPESV IPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

A0A5C2FS99 NADH dehydrogenase subunit 41.7e-7798.04Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SITPLFIPNSRIRPIRLIGLCASLITFLY PVPRIQFDPSTAKSQFVESLRWLPYENINF LGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYV PESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

A0A6A4NCF0 Putative NADH:ubiquinone reductase (H(+)-translocating)1.4e-7696.73Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SI PLFIPNSRIRPIRLIGLCASLITFLY PVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDG+S FFVILTTFLIPICILVGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ
        SLIREFLMIAVFRMLDPLLFYVLPESV IPMLCGAEHLLFAGIKLFLCRGLVQ
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLCRGLVQ

SwissProt top hitse value%identityAlignment
P26848 NADH-ubiquinone oxidoreductase chain 43.1e-3664.12Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        S+  L IPNSR+R IR I +  SLITFLY     I+F+  TAK QFVE++RWLPY NINFY+GIDGISLFFVILTTFL PICILVG+  ++SY KEY+ A
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM
          I E  +IAVF  LD L+FYV  ESV IPM
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM

P27572 NADH-ubiquinone oxidoreductase chain 41.0e-5082.44Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SI  LFIPNS IR IRLIGLC SLITFLY  V  IQFDPSTAK QFVESLRWLPYENI+ Y+GIDG+SLFFVILTTFLIPICILVGWSGMRS+GKEYI A
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM
         LI EFLMIAVF MLD LLFYV  ESV IPM
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM

P93313 NADH-ubiquinone oxidoreductase chain 42.0e-5487.79Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SI  LFIPNSRIR IRLIGLCASLITFLY  V  IQFD STAK QFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYI A
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM
         LI EFLMIAVF MLD LLFYV PESV IPM
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM

Q04050 NADH-ubiquinone oxidoreductase chain 42.1e-6495.42Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SITPLFIPNSRIRPIRLIGLCASLITFLY PVPRIQFD STAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICI VGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM
         LIREFLMIAVFRMLD LLFYV PESVPIPM
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM

Q37617 NADH-ubiquinone oxidoreductase chain 46.1e-2445.21Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESL---------------RWLPYENINFYLGIDGISLFFVILTTFLIPICILV
        +I  LF+P+ + + IR I L +SL+TFL   +  I+FD S+A  QF + +                   +  +NF LG+DGISLFF+ILTT L+PICILV
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESL---------------RWLPYENINFYLGIDGISLFFVILTTFLIPICILV

Query:  GWSGMRSYGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVPIPM
         W+ +  Y KEY  A L+ E LM+ VF +LD LLFY+  ESV IPM
Subjt:  GWSGMRSYGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVPIPM

Arabidopsis top hitse value%identityAlignment
ATMG00580.1 NADH dehydrogenase subunit 42.1e-6494.66Show/hide
Query:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA
        SIT LFIPNSRIRPIRLIGLCASLITFLY PVPRIQFD STAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICI VGWSGMRSYGKEYITA
Subjt:  SITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAKSQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITA

Query:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM
         LIREFLMIAVFRMLD LLFYV PESVPIPM
Subjt:  SLIREFLMIAVFRMLDPLLFYVLPESVPIPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTAAACCGAAACCGAGCTCGATCGAGAGGGCAGCCCCTTTGTTGGCTCTTCGAGACAAAAGCACTCATAGGAATGGTGCAAATTCCCATGTTCTTTCGA
GTCTCGTTTGGTTTCGAGAGCCTCCCCCTCCCCGTCCCTTACTCGTCTTTTGACAGCCGTCATCCTGGATTTTTTTTCCGAAGCATTACTCCTCTTTTCATTCCA
AATTCAAGAATACGACCGATACGATTGATTGGTCTATGTGCCTCTCTTATTACTTTTTTGTATCCCCCTGTTCCTCGGATACAATTCGATCCTTCTACGGCCAAA
TCTCAATTTGTGGAAAGCCTTCGATGGCTTCCTTATGAAAACATCAATTTTTATTTGGGTATAGACGGTATCTCTTTATTCTTCGTGATATTGACCACATTTCTG
ATCCCTATTTGCATTTTAGTGGGTTGGTCTGGTATGAGAAGTTATGGGAAAGAGTATATTACAGCATCTCTAATTCGTGAATTTCTAATGATCGCCGTGTTCCGC
ATGCTGGATCCTCTACTATTCTATGTTCTTCCCGAAAGCGTGCCAATCCCTATGTTGTGCGGAGCTGAGCATCTTCTATTCGCTGGGATCAAGCTTTTCCTCTGC
AGGGGCCTTGTGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTAAACCGAAACCGAGCTCGATCGAGAGGGCAGCCCCTTTGTTGGCTCTTCGAGACAAAAGCACTCATAGGAATGGTGCAAATTCCCATGTTCTTTCGA
GTCTCGTTTGGTTTCGAGAGCCTCCCCCTCCCCGTCCCTTACTCGTCTTTTGACAGCCGTCATCCTGGATTTTTTTTCCGAAGCATTACTCCTCTTTTCATTCCA
AATTCAAGAATACGACCGATACGATTGATTGGTCTATGTGCCTCTCTTATTACTTTTTTGTATCCCCCTGTTCCTCGGATACAATTCGATCCTTCTACGGCCAAA
TCTCAATTTGTGGAAAGCCTTCGATGGCTTCCTTATGAAAACATCAATTTTTATTTGGGTATAGACGGTATCTCTTTATTCTTCGTGATATTGACCACATTTCTG
ATCCCTATTTGCATTTTAGTGGGTTGGTCTGGTATGAGAAGTTATGGGAAAGAGTATATTACAGCATCTCTAATTCGTGAATTTCTAATGATCGCCGTGTTCCGC
ATGCTGGATCCTCTACTATTCTATGTTCTTCCCGAAAGCGTGCCAATCCCTATGTTGTGCGGAGCTGAGCATCTTCTATTCGCTGGGATCAAGCTTTTCCTCTGC
AGGGGCCTTGTGCAGTAA
Protein sequenceShow/hide protein sequence
MMLNRNRARSRGQPLCWLFETKALIGMVQIPMFFRVSFGFESLPLPVPYSSFDSRHPGFFFRSITPLFIPNSRIRPIRLIGLCASLITFLYPPVPRIQFDPSTAK
SQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVPIPMLCGAEHLLFAGIKLFLC
RGLVQ