; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G10860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G10860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 45
Genome locationClcChr11:16425687..16426779
RNA-Seq ExpressionClc11G10860
SyntenyClc11G10860
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032271.1 CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa]2.2e-3189.53Show/hide
Query:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        MVFSIHRVL+VL+  VALLAVKP+QACA RSIDLALRPSRHILVEDSRVEE+NMKRNSLP+NNKFDPNRSSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

KAG6598982.1 hypothetical protein SDJN03_08760, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2989.66Show/hide
Query:  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        MVFSIHRVLVV LMCVVALLAV+PDQACA RSIDLA R SRHILVEDSRVEE NMKRNSLPRN+KFDPN+SSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

KAG7029950.1 hypothetical protein SDJN02_08294, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3090.8Show/hide
Query:  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        MVFSIHRVLVV LMCVVALLAV+PDQACA RSIDLALR SRHILVEDSRVEE NMKRNSLPRN+KFDPN+SSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

KAG7036811.1 hypothetical protein SDJN02_00431, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-1975.86Show/hide
Query:  MVFSIHRV-LVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        MVFSIHRV LV+LMCVVALLAVKP+QAC   S+DLALRP RH+L ED R       RNS PR NKFDPNRSSKRRVRRGSDPIHN S
Subjt:  MVFSIHRV-LVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

KGN61380.1 hypothetical protein Csa_006322 [Cucumis sativus]7.2e-3089.66Show/hide
Query:  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        M FSIHRVL+V LMCVVALLAVK DQACA RSIDLALRPSRHILVEDS VEE+NMKRNS PRNNKFDPNRSSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

TrEMBL top hitse value%identityAlignment
A0A067GTG0 Uncharacterized protein2.1e-1148.42Show/hide
Query:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRH---------ILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        MVF   RVL++L+C+  LL+V+PD+    RSIDL LR ++H          +++++ +  MN ++ S   +NKFDPN+SSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRH---------ILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

A0A0A0LHH0 Uncharacterized protein3.5e-3089.66Show/hide
Query:  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        M FSIHRVL+V LMCVVALLAVK DQACA RSIDLALRPSRHILVEDS VEE+NMKRNS PRNNKFDPNRSSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

A0A5A7SRV2 CLAVATA3/ESR (CLE)-related protein 451.1e-3189.53Show/hide
Query:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        MVFSIHRVL+VL+  VALLAVKP+QACA RSIDLALRPSRHILVEDSRVEE+NMKRNSLP+NNKFDPNRSSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

A5APJ5 Uncharacterized protein9.5e-1253.68Show/hide
Query:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSR--HILVEDSR-------VEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        MVFS  RVLV L+C + +LAV+PD+    RSIDL LR S+  H+L   ++       VE++N + N+ P N KFD N+SSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSR--HILVEDSR-------VEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

V4VH78 Uncharacterized protein2.1e-1148.42Show/hide
Query:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRH---------ILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS
        MVF   RVL++L+C+  LL+V+PD+    RSIDL LR ++H          +++++ +  MN ++ S   +NKFDPN+SSKRRVRRGSDPIHN S
Subjt:  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRH---------ILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTAGTATACACAGAGTACTTGTTGTCCTCATGTGTGTTGTTGCACTTTTAGCTGTTAAACCAGATCAGGCTTGTGCTTCGAGAAGCATAGACCTTGCTCTAAG
ACCAAGCCGCCACATTCTAGTTGAAGACTCAAGGGTGGAGGAAATGAATATGAAAAGGAATTCACTACCACGAAACAACAAGTTCGATCCAAATAGATCAAGCAAAAGAA
GGGTTCGACGAGGATCAGATCCTATCCACAACAGTTCATCTTGTACGGATACTATTTTGGGAAATTATATAGAAGTTGTTCTCCTCTCTTTCCCAGAAATTGCTCAGTTA
CACTCAAATCTGCACACAATCAATTACCCATCTGCTCACTGTGGAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTAGTATACACAGAGTACTTGTTGTCCTCATGTGTGTTGTTGCACTTTTAGCTGTTAAACCAGATCAGGCTTGTGCTTCGAGAAGCATAGACCTTGCTCTAAG
ACCAAGCCGCCACATTCTAGTTGAAGACTCAAGGGTGGAGGAAATGAATATGAAAAGGAATTCACTACCACGAAACAACAAGTTCGATCCAAATAGATCAAGCAAAAGAA
GGGTTCGACGAGGATCAGATCCTATCCACAACAGTTCATCTTGTACGGATACTATTTTGGGAAATTATATAGAAGTTGTTCTCCTCTCTTTCCCAGAAATTGCTCAGTTA
CACTCAAATCTGCACACAATCAATTACCCATCTGCTCACTGTGGAGCCTAG
Protein sequenceShow/hide protein sequence
MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSSSCTDTILGNYIEVVLLSFPEIAQL
HSNLHTINYPSAHCGA