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Clc11G10990 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G10990
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110412945
Genome locationClcChr11:16504347..16504784
RNA-Seq ExpressionClc11G10990
SyntenyClc11G10990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833202.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]6.1e-3366.04Show/hide
Query:  LETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCSYNLQSICSVQNNPYDETYNSGWRNHLDFGWVGNQQQTQ
        +ETDAT+N++ Q+ N+TS+LQT+ L NQG +VA+M+A++ +N TASV C Q G GHLYDMC YN QS+C VQNNPY +TYN GWRNHL+FGW  NQQQTQ
Subjt:  LETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCSYNLQSICSVQNNPYDETYNSGWRNHLDFGWVGNQQQTQ

Query:  RAEQQP
         AEQQP
Subjt:  RAEQQP

XP_038874978.1 putative uncharacterized protein DDB_G0279653 [Benincasa hispida]2.6e-2342.66Show/hide
Query:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS
        TY+ A+ I DR S NT++WVDDGY  R   RR+    ++  D    +A Q+  +TS+LQT+ + NQG    +    +A    A+++C QYG GH  +MC 
Subjt:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS

Query:  YNLQSICSVQNNPYDETYNSGWRNHLDFGWVGNQQQTQRAEQQ
         N QS+ ++QNNPY  TYN GWRNH +F W GN  Q  ++  Q
Subjt:  YNLQSICSVQNNPYDETYNSGWRNHLDFGWVGNQQQTQRAEQQ

XP_038880418.1 uncharacterized protein LOC120072068 [Benincasa hispida]6.3e-2239.85Show/hide
Query:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS
        TY+ A+ I DR S NT+EW+D+GYE R++ +R+ ++ ++  +   ++A Q+  +TS+LQT+V++ QG    ++   +A+   A++ C QYG GH  ++C 
Subjt:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS

Query:  YNLQSICSVQNNPYDETYNSGWRNHLDFGWVGN
         N QS+ S+ N  +  TYN GWRNH  F W GN
Subjt:  YNLQSICSVQNNPYDETYNSGWRNHLDFGWVGN

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]1.8e-2142.31Show/hide
Query:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS
        TY+ A+ I DR SWN ++WVDDGY  R + RR+    ++  +    +A Q+  +TS+LQ + L NQG         +A    A +   QYG GH  +MC 
Subjt:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS

Query:  YNLQSICSVQNNPYDETYNSGWRNHLDFGW
         N Q +C +QNNPY+ TYN  WRNH +FGW
Subjt:  YNLQSICSVQNNPYDETYNSGWRNHLDFGW

XP_038902511.1 uncharacterized protein LOC120089170 [Benincasa hispida]5.9e-2039.26Show/hide
Query:  YSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCSY
        Y+ A+ I DR   NT++WVD+GY  R   RR+ ++ ++  D    +A Q+  +TS+LQ + + N G         + +   A + C Q G GH  +MC  
Subjt:  YSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCSY

Query:  NLQSICSVQNNPYDETYNSGWRNHLDFGWVGNQQQ
        N Q++ S+QNNPY+ TYN GWRNH +F W GN  Q
Subjt:  NLQSICSVQNNPYDETYNSGWRNHLDFGWVGNQQQ

TrEMBL top hitse value%identityAlignment
A0A6J0ZYV0 uncharacterized protein LOC1104134133.6e-0732.59Show/hide
Query:  AEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCSYNLQ
        A ++ +  + N  +W  +    RS +R+    G  E DA   +  Q+  ++  L TL              VHA+   + V C   G  H YD C YN +
Subjt:  AEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCSYNLQ

Query:  SICSV------QNNPYDETYNSGWRNHLDFGWVGN
        S+  V      QNNPY  TYN GWRNH +F W  N
Subjt:  SICSV------QNNPYDETYNSGWRNHLDFGWVGN

A0A6J1EEI2 uncharacterized protein LOC1114333945.2e-1436.31Show/hide
Query:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS
        TY+ A +I +R + N  +W D     RS   R+T+ G+LE DA +++  QL ++T++LQ L L       A ++ V  +N TA+  C   G  H +D C 
Subjt:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS

Query:  YNLQSICSV---------QNNPYDETYNSGWRNHLDFGWVG----NQQQTQRAEQQP
         N  SI  V         +NNP+  TYN GWRNH +F W G    NQQ   +A   P
Subjt:  YNLQSICSV---------QNNPYDETYNSGWRNHLDFGWVG----NQQQTQRAEQQP

A0A6J1EQ90 uncharacterized protein LOC1114364111.2e-1335.95Show/hide
Query:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS
        TY+ A +I +R + N  +W D     RS   R+T+ G+LE DA +++  QL ++T++LQ L L       A ++   A+N TA+  C   G  H +D C 
Subjt:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS

Query:  YNLQSIC---------SVQNNPYDETYNSGWRNHLDFGWVG----NQQQTQRA
         N  SI          +++NNP+  TYN GWRNH +F W G    NQQ   +A
Subjt:  YNLQSIC---------SVQNNPYDETYNSGWRNHLDFGWVG----NQQQTQRA

A0A6J1G7Q6 uncharacterized protein LOC1114515983.3e-0833.76Show/hide
Query:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS
        TY+ A +I +R + N  +WVD     RS   ++T+  +LE DA +++  QL ++T++LQ L         A  +    M  TA+  C   G  H +D C 
Subjt:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS

Query:  YNLQSICSVQN---------NPYDETYNSGWRNHLDFGWVG----NQQQTQRAEQQP
         N  SI  V N         NP   TYN GWRNH +F   G    NQQ   +A   P
Subjt:  YNLQSICSVQN---------NPYDETYNSGWRNHLDFGWVG----NQQQTQRAEQQP

A0A6J1H7E4 uncharacterized protein LOC1114611681.2e-1034.01Show/hide
Query:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS
        TY+ A +I +R + N  +W D     RS   ++T+ G+LE DA +++  QL ++T++LQ L         A  +    M  TA+  C   G  H +D C 
Subjt:  TYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCS

Query:  YNLQSICSV---------QNNPYDETYNSGWRNHLDFGWVGNQQQTQ
         N  SI  V         +NNP   TYN GWRNH +F W G     Q
Subjt:  YNLQSICSV---------QNNPYDETYNSGWRNHLDFGWVGNQQQTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTACTCATATGCCGAAGATATTTTCGACAGAACTTCATGGAACACCAATGAGTGGGTGGACGACGGATATGAATTTCGCTCCACCAATAGAAGGCAAACGCAAGC
TGGAATGCTTGAAACTGATGCGACCGCTAACATGGCAGTGCAACTCGACAATATAACATCCATGCTACAAACACTAGTCTTGAAAAATCAAGGTAGATCAGTTGCTGCGA
TGAATGCAGTGCACGCGATGAATCTGACAGCATCTGTAGACTGCCCGCAGTATGGTGCAGGACACTTGTATGACATGTGTTCCTACAACCTTCAGTCTATCTGCAGTGTT
CAAAACAACCCCTACGACGAGACGTACAATTCGGGTTGGAGGAACCACCTCGATTTCGGATGGGTTGGGAATCAGCAACAAACGCAGAGGGCTGAGCAGCAGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTACTCATATGCCGAAGATATTTTCGACAGAACTTCATGGAACACCAATGAGTGGGTGGACGACGGATATGAATTTCGCTCCACCAATAGAAGGCAAACGCAAGC
TGGAATGCTTGAAACTGATGCGACCGCTAACATGGCAGTGCAACTCGACAATATAACATCCATGCTACAAACACTAGTCTTGAAAAATCAAGGTAGATCAGTTGCTGCGA
TGAATGCAGTGCACGCGATGAATCTGACAGCATCTGTAGACTGCCCGCAGTATGGTGCAGGACACTTGTATGACATGTGTTCCTACAACCTTCAGTCTATCTGCAGTGTT
CAAAACAACCCCTACGACGAGACGTACAATTCGGGTTGGAGGAACCACCTCGATTTCGGATGGGTTGGGAATCAGCAACAAACGCAGAGGGCTGAGCAGCAGCCGTAG
Protein sequenceShow/hide protein sequence
MTYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGMLETDATANMAVQLDNITSMLQTLVLKNQGRSVAAMNAVHAMNLTASVDCPQYGAGHLYDMCSYNLQSICSV
QNNPYDETYNSGWRNHLDFGWVGNQQQTQRAEQQP