; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G11290 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G11290
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionJHL23J11.5 protein
Genome locationClcChr11:17200904..17201932
RNA-Seq ExpressionClc11G11290
SyntenyClc11G11290
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051315.1 uncharacterized protein E6C27_scaffold55G00280 [Cucumis melo var. makuwa]6.0e-9496.74Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGSVTVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GEGLKRSAKVQQFEDSTWAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV

XP_004138889.1 uncharacterized protein LOC101217347 [Cucumis sativus]1.5e-9295.11Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLSPSSSTS+  SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGSVTVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV
        VFTRT DFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GEGLKRSAKVQQFEDSTWAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV

XP_008441816.1 PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]1.5e-9296.22Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGSVTVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSTWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGN G+GEGLKRSAKVQQFEDSTWAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSTWAAPFPV

XP_022996789.1 uncharacterized protein LOC111491920 [Cucurbita maxima]7.9e-8688.59Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLS SSSTS+ ++HYNIH LFLLCNY+LLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGA+SGCAMASAATGRW+GVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV
        V+TRT +FLGELKSYVREE G+VILKL GGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGE LKRS KVQQFEDS WA PFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV

XP_038890643.1 uncharacterized protein LOC120080148 [Benincasa hispida]1.9e-9296.2Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLSPSSSTS+ +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV
        VFTRT DFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYY+YVEGNGS EGLKRS KVQQFEDSTWAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV

TrEMBL top hitse value%identityAlignment
A0A0A0LHB3 Uncharacterized protein7.2e-9395.11Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLSPSSSTS+  SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGSVTVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV
        VFTRT DFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GEGLKRSAKVQQFEDSTWAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV

A0A1S3B526 uncharacterized protein LOC1034858697.2e-9396.22Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGSVTVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSTWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGN G+GEGLKRSAKVQQFEDSTWAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSTWAAPFPV

A0A5A7UCF0 Uncharacterized protein2.9e-9496.74Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGSVTVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GEGLKRSAKVQQFEDSTWAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV

A0A5D3DJ66 Uncharacterized protein7.2e-9396.22Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGSVTVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSTWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGN G+GEGLKRSAKVQQFEDSTWAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSTWAAPFPV

A0A6J1K9N5 uncharacterized protein LOC1114919203.8e-8688.59Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGLS SSSTS+ ++HYNIH LFLLCNY+LLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGA+SGCAMASAATGRW+GVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV
        V+TRT +FLGELKSYVREE G+VILKL GGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGE LKRS KVQQFEDS WA PFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02640.1 unknown protein6.1e-6064.84Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL
        MGL P    S+ +SHY  HKLFL  NY+LLGA+SSCIFLTLSLRL+PS+CGFF+I LHA TIA AVSGCA AS    RW+  HM+ TVLTAIFQGSV+VL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFE---DSTWA
        +FT T +FL  L SYVRE++ S+ILKL GGL  +IFCLEWIVLVLAF LKYY YV+G+ +G  +KR+ KVQ  E   +S WA
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFE---DSTWA

AT5G16250.1 unknown protein9.4e-6168.33Show/hide
Query:  SSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVLVFTRT
        SSS+ V +SHY+ HK+FL  NYILLGAASSCIFLTLSLRL+PS+CGF +I LHA TIA AVSGCA AS    RW+  HMV TVLTAIFQGSV+VL+FT T
Subjt:  SSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVLVFTRT

Query:  GDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFED-STWAAPFPV
          FLG LKSYVREED +VILKLGGGL  +IFCL+WIVLV AF LKYY YV+G G G  +KR+ KVQ  E+   W  PF V
Subjt:  GDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFED-STWAAPFPV

AT5G36710.1 unknown protein1.3e-4667.79Show/hide
Query:  KSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAM-----ASAATGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGD
        KS  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC++     ++ A+ R +G HMV TVLTAIFQG+V+VL+FTRTGD
Subjt:  KSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAM-----ASAATGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGD

Query:  FLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVE
        FL  LKSYVREEDG VILKL GGL  L+FCLEWIVLVLAF LKY  Y++
Subjt:  FLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVE

AT5G36800.1 unknown protein1.3e-4667.79Show/hide
Query:  KSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAM-----ASAATGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGD
        KS  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC++     ++ A+ R +G HMV TVLTAIFQG+V+VL+FTRTGD
Subjt:  KSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAM-----ASAATGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGD

Query:  FLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVE
        FL  LKSYVREEDG VILKL GGL  L+FCLEWIVLVLAF LKY  Y++
Subjt:  FLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTTCACCTTCGTCTTCAACCTCCGTTTGTAAATCGCACTACAACATCCACAAACTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCAGCTGCAT
TTTCCTTACTCTCTCCCTCCGCCTCGTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATCGCCGGTGCCGTCTCTGGATGCGCCATGGCCTCTG
CTGCCACCGGCCGGTGGTTTGGTGTCCACATGGTCTTCACCGTCCTCACTGCCATCTTCCAAGGCTCCGTCACAGTCTTGGTCTTCACTAGAACCGGTGACTTCCTCGGC
GAATTGAAATCGTATGTTCGAGAGGAAGACGGATCCGTGATTCTGAAATTGGGCGGGGGATTGAGCGGGTTGATCTTCTGTTTGGAGTGGATTGTTCTGGTTCTTGCGTT
TTGTTTGAAGTATTATTTGTATGTTGAAGGAAATGGAAGTGGTGAGGGTTTGAAGAGGAGTGCTAAGGTTCAGCAGTTTGAAGATTCAACTTGGGCAGCACCATTCCCTG
TTTAG
mRNA sequenceShow/hide mRNA sequence
CTTCAATTATGAACCAAAAAAGAAAAATGACCGTTGCCCCAAAAATCTTCAAATTCCTATAACTTCCCTTTCCCCTTCCTCTTCATCCCCAATTCCATTCTCATCTCCTC
AATCTCCAAAATCCCTCAAAATTTCCCAAAATACCCTCACTCACAAATCTCCTCTCTTCTCCAATGGGCCTTTCACCTTCGTCTTCAACCTCCGTTTGTAAATCGCACTA
CAACATCCACAAACTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTTACTCTCTCCCTCCGCCTCGTCCCTTCCGTTTGCGGCTTCT
TCATCATCTTCCTCCACGCCTTCACCATCGCCGGTGCCGTCTCTGGATGCGCCATGGCCTCTGCTGCCACCGGCCGGTGGTTTGGTGTCCACATGGTCTTCACCGTCCTC
ACTGCCATCTTCCAAGGCTCCGTCACAGTCTTGGTCTTCACTAGAACCGGTGACTTCCTCGGCGAATTGAAATCGTATGTTCGAGAGGAAGACGGATCCGTGATTCTGAA
ATTGGGCGGGGGATTGAGCGGGTTGATCTTCTGTTTGGAGTGGATTGTTCTGGTTCTTGCGTTTTGTTTGAAGTATTATTTGTATGTTGAAGGAAATGGAAGTGGTGAGG
GTTTGAAGAGGAGTGCTAAGGTTCAGCAGTTTGAAGATTCAACTTGGGCAGCACCATTCCCTGTTTAGAAACATAACCAACACATTTTTTGTCATGCTGAATTATCATTT
GTTATTCTTGATTTATCTGTTTGTGATTCATATTCATATGTAATTCTTTCCTATTTCATTATATGTGATGATTTATCTGTTTGTGAGTGTATGTTGGGAATGATGGCTTC
AAGTGTGATTGATTCTACTTTGAAGGGGATATTCATTCAAATGATATACTATACATTACATCTCTCCCAATTTTCATTAGATTTTCCATTTTCTCTTTTCAAATGGAAAA
TACTTTCTTGCTGATTTTGTATCAAATATTATTTTGGGG
Protein sequenceShow/hide protein sequence
MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLG
ELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSTWAAPFPV