; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G11410 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G11410
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:18061992..18063214
RNA-Seq ExpressionClc11G11410
SyntenyClc11G11410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061418.1 uncharacterized protein E6C27_scaffold749G001170 [Cucumis melo var. makuwa]1.1e-7485.47Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIHLQH QIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK       GRVREKRYPHVGLKEHHQI
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRVFPFLLFHIF
        PIKKQQM    Q GRVFDVTETGGARKLKQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKRVFP LLFH+F
Subjt:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRVFPFLLFHIF

TYK28677.1 uncharacterized protein E5676_scaffold165G00480 [Cucumis melo var. makuwa]1.3e-7586.03Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIHLQHHQIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK       GRVREKRYPHVGLKEHHQI
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRVFPFLLFHIF
        PIKKQQM    Q GRVFDVTETGGARKLKQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKRVFP LLFH+F
Subjt:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRVFPFLLFHIF

XP_008441806.1 PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo]7.3e-7186.39Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIHLQHHQIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK       GRVREKRYPHVGLKEHHQI
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR
        PIKKQQM    Q GRVFDVTETGGARKLKQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKR
Subjt:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR

XP_011649025.1 uncharacterized protein LOC101218053 [Cucumis sativus]3.6e-7085.8Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIHLQHHQIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPC PPSDLYSADR KPPPL T  RK       GRVREKRYPHVGLKEHHQI
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR
        PIKKQQM    Q GRVFDVTETGGARKLKQNDV SI RPPPRSN    PKPVDEDLYKIPPELLHSSKR
Subjt:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR

XP_038889486.1 uncharacterized protein LOC120079394 [Benincasa hispida]2.4e-7489.16Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEH--H
        NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPC PPSDLYSADRKKPPPLATA RK       GRVREKR PHVGLKEH  +
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEH--H

Query:  QIPIKKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSN-ARPPKPVDEDLYKIPPELLHSSKR
        QIPIKKQQMQQGRVFDVTETGGARKLKQNDVS+P PP RSN +RPPKPVDEDLYKIPPELLHSSKR
Subjt:  QIPIKKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSN-ARPPKPVDEDLYKIPPELLHSSKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKP3 Uncharacterized protein1.8e-7085.8Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIHLQHHQIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPC PPSDLYSADR KPPPL T  RK       GRVREKRYPHVGLKEHHQI
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR
        PIKKQQM    Q GRVFDVTETGGARKLKQNDV SI RPPPRSN    PKPVDEDLYKIPPELLHSSKR
Subjt:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR

A0A1S3B517 uncharacterized protein LOC1034858593.6e-7186.39Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIHLQHHQIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK       GRVREKRYPHVGLKEHHQI
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR
        PIKKQQM    Q GRVFDVTETGGARKLKQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKR
Subjt:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR

A0A5A7V1J3 Uncharacterized protein5.3e-7585.47Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIHLQH QIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK       GRVREKRYPHVGLKEHHQI
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRVFPFLLFHIF
        PIKKQQM    Q GRVFDVTETGGARKLKQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKRVFP LLFH+F
Subjt:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRVFPFLLFHIF

A0A5D3DXR6 Uncharacterized protein6.3e-7686.03Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIHLQHHQIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK       GRVREKRYPHVGLKEHHQI
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRVFPFLLFHIF
        PIKKQQM    Q GRVFDVTETGGARKLKQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKRVFP LLFH+F
Subjt:  PIKKQQM----QQGRVFDVTETGGARKLKQNDV-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRVFPFLLFHIF

A0A6J1HN41 uncharacterized protein LOC1114656952.7e-6379.27Show/hide
Query:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        NSGQIH+QHHQIPAFGDWDKA+DLPITQYFE+ARQAGLI YSSSSGE+GPCLP SDLYS DRKK PPL+ AARK        RV EKRYP VGL + HQ 
Subjt:  NSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSNA-RPPKPVDEDLYKIPPELLHSSKR
        P+KK   QQGRVFDVTETGGARK KQNDVSIPR PP+SNA +PP+PVDEDLYKIPPELLHSSKR
Subjt:  PIKKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSNA-RPPKPVDEDLYKIPPELLHSSKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18310.1 unknown protein2.3e-1435.29Show/hide
Query:  QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQIPIKKQQMQQG
        QIP FG+W++A ++PITQYFE+ RQA  ++ +S          P  L+            A R+T G       +EKR P        Q  ++    Q  
Subjt:  QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQIPIKKQQMQQG

Query:  RVFDVTETGGARKLKQNDVSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKR
        + +   +  G ++ K NDV++         +PPKPVDEDLYKIPPE +HSS R
Subjt:  RVFDVTETGGARKLKQNDVSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKR

AT5G18310.2 unknown protein1.7e-1737.65Show/hide
Query:  QIPAFGDWDKAKDLPITQYFESARQAGLIRY----SSSSGESGPCLPPSDLYSADRKK-----PPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQIP
        QIP FG+W++A ++PITQYFE+ RQAGLIR+    +SS+  +      S   SA+  K     P P    A++   G      +EKR P        Q  
Subjt:  QIPAFGDWDKAKDLPITQYFESARQAGLIRY----SSSSGESGPCLPPSDLYSADRKK-----PPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQIP

Query:  IKKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKR
        ++    Q  + +   +  G ++ K NDV++         +PPKPVDEDLYKIPPE +HSS R
Subjt:  IKKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKR

AT5G48500.1 unknown protein1.6e-0730.49Show/hide
Query:  GQIHLQHHQIPAFGDWDKAKDLPITQYFESA--RQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI
        G  + +   +PAFG WD    +P TQ FE+A  +Q   + Y+S   +    L   DLY       P +    R+ R  + Q    +KR  +V  ++H+  
Subjt:  GQIHLQHHQIPAFGDWDKAKDLPITQYFESA--RQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQI

Query:  PIKKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSNARPPKPVDEDLYKIPPELLH-SSKR
                + R F+              VS P P  +   + PKPVDEDLYK+ P+LL   SKR
Subjt:  PIKKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSNARPPKPVDEDLYKIPPELLH-SSKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATAAACAGTGGCCAAATCCACTTGCAGCACCACCAAATCCCAGCCTTCGGAGACTGGGATAAGGCAAAGGACTTGCCGATCACTCAGTATTTCGAAAGT
GCTCGTCAGGCTGGTTTGATCCGCTACAGTTCCTCTTCCGGTGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGAAGAAACCTCCGCCG
CTCGCCACCGCCGCGCGCAAGACACGTGGCGGGATTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAGGAACATCATCAGATTCCAATA
AAGAAGCAGCAGATGCAACAAGGGAGGGTGTTCGACGTGACGGAAACGGGAGGAGCGCGAAAATTGAAGCAAAACGACGTGTCGATTCCGCGTCCTCCGCCTAGA
TCTAATGCTAGACCACCCAAACCTGTTGATGAAGATCTCTACAAAATCCCACCTGAGCTACTCCATTCTTCTAAGCGGGTATTTCCCTTCCTCCTTTTTCACATA
TTCTCATTTAACATCTCCACAAAACACGTTACTCAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAATAAACAGTGGCCAAATCCACTTGCAGCACCACCAAATCCCAGCCTTCGGAGACTGGGATAAGGCAAAGGACTTGCCGATCACTCAGTATTTCGAAAGT
GCTCGTCAGGCTGGTTTGATCCGCTACAGTTCCTCTTCCGGTGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGAAGAAACCTCCGCCG
CTCGCCACCGCCGCGCGCAAGACACGTGGCGGGATTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAGGAACATCATCAGATTCCAATA
AAGAAGCAGCAGATGCAACAAGGGAGGGTGTTCGACGTGACGGAAACGGGAGGAGCGCGAAAATTGAAGCAAAACGACGTGTCGATTCCGCGTCCTCCGCCTAGA
TCTAATGCTAGACCACCCAAACCTGTTGATGAAGATCTCTACAAAATCCCACCTGAGCTACTCCATTCTTCTAAGCGGGTATTTCCCTTCCTCCTTTTTCACATA
TTCTCATTTAACATCTCCACAAAACACGTTACTCAAAATTAA
Protein sequenceShow/hide protein sequence
MIINSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKTRGGILQGRVREKRYPHVGLKEHHQIPI
KKQQMQQGRVFDVTETGGARKLKQNDVSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKRVFPFLLFHIFSFNISTKHVTQN