; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G12060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G12060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionU3 small nucleolar RNA-associated protein 11
Genome locationClcChr11:20502474..20507085
RNA-Seq ExpressionClc11G12060
SyntenyClc11G12060
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR007144 - Small-subunit processome, Utp11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651705.1 hypothetical protein Csa_006293 [Cucumis sativus]1.4e-11395.61Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLYF EDREEANEILSRSSKGLVASSEAVPDSI+RKTISSYKELEARRSRV ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLREDEL+NPT KPVYKWRAERKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR

KAG6586143.1 putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyrosperma subsp. sororia]4.8e-10992.58Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSLKNA+P+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKG-LVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRK
        YILQK+QSEKRKIEKLTATLHSLDNQPSNKH+YF EDREEANEI SRSSKG  VASSEAVPDSIKRKTISSYKELEARRSRV ELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKG-LVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYKWRAERKR
        KGRKRKLREDEL NPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELANPTSKPVYKWRAERKR

XP_004152832.1 probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus]1.4e-11395.61Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLYF EDREEANEILSRSSKGLVASSEAVPDSI+RKTISSYKELEARRSRV ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLREDEL+NPT KPVYKWRAERKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR

XP_008441892.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo]3.2e-11395.18Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLYF EDREEANEILSRSSKGLVASSEAVPDSI+RKT++SYKELEARRSRV ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLREDE+ANPTSKPVYKWRAERKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR

XP_038889584.1 probable U3 small nucleolar RNA-associated protein 11 [Benincasa hispida]1.6e-11295.61Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHK ESHVNKYTAE+LMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        YILQKMQSEKRKIEKLTATLHSLDNQPSNKH YF EDREEANEILSRSSK LVASSEAVPDSIKRKTI+SYKELEARRSRV ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLREDELANPTSKPVYKWRAERKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKH7 U3 small nucleolar RNA-associated protein 117.0e-11495.61Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLYF EDREEANEILSRSSKGLVASSEAVPDSI+RKTISSYKELEARRSRV ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLREDEL+NPT KPVYKWRAERKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR

A0A1S3B400 U3 small nucleolar RNA-associated protein 111.6e-11395.18Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLYF EDREEANEILSRSSKGLVASSEAVPDSI+RKT++SYKELEARRSRV ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLREDE+ANPTSKPVYKWRAERKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR

A0A5A7TX11 U3 small nucleolar RNA-associated protein 111.6e-11395.18Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLYF EDREEANEILSRSSKGLVASSEAVPDSI+RKT++SYKELEARRSRV ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLREDE+ANPTSKPVYKWRAERKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR

A0A6J1FGQ3 U3 small nucleolar RNA-associated protein 111.5e-10892.14Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSLKNA+P+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKG-LVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRK
        YILQK+QSEKRKIEKLTATLHSLDNQPSNKH+YF EDREEANEI SRSSK   VASSEAVPDSIKRKTISSYKELEARRSRV ELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKG-LVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYKWRAERKR
        KGRKRKLREDEL NPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELANPTSKPVYKWRAERKR

A0A6J1HNU6 U3 small nucleolar RNA-associated protein 112.0e-10892.14Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSLKNA+P+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKG-LVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRK
        YILQK+QSEKRKIEKLTATLHSLDNQPSNKH+YF EDREEANEI SRSSKG  VASSEAVPDSIKRKTISSYKELEARRSRV ELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKG-LVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYKWRAERKR
        KGRKRKLREDEL NPTSK VYKWRAERKR
Subjt:  KGRKRKLREDELANPTSKPVYKWRAERKR

SwissProt top hitse value%identityAlignment
Q55C50 Probable U3 small nucleolar RNA-associated protein 112.2e-2737Show/hide
Query:  SLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYI
        +L+  +P+R  +ER QP S KK G LE+ KDY+ERAK ++ K DTL+KLK +AAFKNPDEF +KMI ++ VDGVH  E        EQ++ +KTQD  Y+
Subjt:  SLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYI

Query:  LQKMQSEKRKIEKLTATLHSLDN--QPSNKHLYFVEDREEAN----------------------EILSRSSKGLVASSEAVP--DSIKRKTISSYKELEA
          K +++ +KIE+L ATL  +D+  +P+ + +Y  +++E  N                      +I       LV + +  P    ++  T +SYKEL+ 
Subjt:  LQKMQSEKRKIEKLTATLHSLDN--QPSNKHLYFVEDREEAN----------------------EILSRSSKGLVASSEAVP--DSIKRKTISSYKELEA

Query:  RRSRVGELEKLYMDMTLQQELRKKGRK
        R+ R  +L K  MD++  +   K+G K
Subjt:  RRSRVGELEKLYMDMTLQQELRKKGRK

Q8R5K5 Probable U3 small nucleolar RNA-associated protein 112.9e-2434.43Show/hide
Query:  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSE
        +R Y+ER+QP  RK  GLLEK KDY  RA  + KK++ L+ L++KA  KNPDEFY+KM R +  DGVH  +    + T EQL LM+TQD  YI  K  +E
Subjt:  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSE

Query:  KRKIEKLTATLHSLDNQ--PSNKHLYFVEDREE------------ANEILSR-----------SSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGEL
         +KIE+L + LH LD Q    N+H++F + ++E            A E++ R             K    +++     I ++    Y  L  R  R  +L
Subjt:  KRKIEKLTATLHSLDNQ--PSNKHLYFVEDREE------------ANEILSR-----------SSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGEL

Query:  EKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYKWRAERKR
          +   +  +++L  K +K K++++ + +P    +YK+++ RKR
Subjt:  EKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYKWRAERKR

Q8S1Z1 Probable U3 small nucleolar RNA-associated protein 116.8e-8268.56Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAI RR +KERAQP SRKKFGLLEKHKDYI RAKAFH+KE+T+RKLKEKA+F+NPDEFYFKMI ++TVDG+H+P+   NKYT ++LML+KT+D G
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSR-SSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRK
        YILQ +QSEK+KIEKL++ LH LDN+  NKH+YF EDREE  EI SR   K      + +P  IKRKT SSY+ELE R+ RV +LEKLY DM LQ+EL+K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSR-SSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYKWRAERKR
         GRKRKLREDE+ N TS+PVYKWRA+RKR
Subjt:  KGRKRKLREDELANPTSKPVYKWRAERKR

Q9CZJ1 Probable U3 small nucleolar RNA-associated protein 111.5e-2535.25Show/hide
Query:  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSE
        +R ++ER+QP  RK+ GLLEK KDY  RA  +HKK+D LR L++KA  KNPDEFY+KM R +  DGVH  + +  + TAEQL LM+TQD  YI  K  +E
Subjt:  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSE

Query:  KRKIEKLTATLHSLDNQ--PSNKHLYFVEDREE------------ANEILSR-----------SSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGEL
         +KIE+L + LH LD Q     KH++F + ++E            A E++ R             +   A+ +     I ++    Y  L  R  R  +L
Subjt:  KRKIEKLTATLHSLDNQ--PSNKHLYFVEDREE------------ANEILSR-----------SSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGEL

Query:  EKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYKWRAERKR
          +   +  +++L  K +K K++++ + +P    +Y+++  RKR
Subjt:  EKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYKWRAERKR

Q9M223 Probable U3 small nucleolar RNA-associated protein 112.6e-7361.4Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAIPR  +KER+QP +RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNPDEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD G
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        Y+ QK QSEK KI+KLTA+L    +Q S +H+Y+ EDREEA E+  +       S+  +P  IK+K   SY++LE R+SR  +LEKLY DM++Q+EL+KK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLR+DEL NP  K VYKWRA+RKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR

Arabidopsis top hitse value%identityAlignment
AT3G60360.1 embryo sac development arrest 141.8e-7461.4Show/hide
Query:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAIPR  +KER+QP +RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNPDEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD G
Subjt:  MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK
        Y+ QK QSEK KI+KLTA+L    +Q S +H+Y+ EDREEA E+  +       S+  +P  IK+K   SY++LE R+SR  +LEKLY DM++Q+EL+KK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYKWRAERKR
        GRKRKLR+DEL NP  K VYKWRA+RKR
Subjt:  GRKRKLREDELANPTSKPVYKWRAERKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCCTAAAGAATGCGATTCCTAGACGGCCTTACAAGGAGCGAGCTCAGCCGCATTCTCGGAAAAAATTTGGGCTTCTTGAGAAGCACAAAGATTATATCGAGCG
TGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTG
ATGGAGTCCATAAGCCAGAGAGTCATGTTAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAATGCAGAGTGAGAAA
AGGAAAATTGAAAAACTGACGGCAACGTTGCATTCTCTTGATAATCAGCCATCAAATAAGCATCTTTACTTTGTCGAAGACAGGGAGGAAGCCAATGAAATTCTATCTCG
CTCTTCTAAAGGATTGGTGGCATCTTCTGAGGCAGTTCCTGATAGTATTAAAAGGAAAACCATTTCTTCTTACAAAGAATTGGAGGCAAGGAGAAGTAGAGTCGGTGAAT
TAGAGAAACTTTATATGGATATGACACTGCAACAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGAGAAGATGAACTTGCCAATCCAACTTCAAAACCTGTATAT
AAATGGCGGGCAGAACGAAAGCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATTAAATTAAATTCAAAAGTGAAAAAAAGAAAAAAAACCCAAACCCTTCCGTCTTCCTCGCACTCTCACTCTCACTCTCACGTGCGGCACCTCCTCCTCCTTCTTCACGC
CGGCTCCTCCTCCCTCTCAGCAGTATAGTGTTGCCGCCGCCGTCTTCTTCTGCTGCGTCCCTCCGCCTTCTGCCGCTTCTTACGGAAATTAAGTCATTATTTGGTTGTAC
TTGCACATCAGTTTCTTGCTCTCTTATTGTTTGCAATGTCGTCCCTAAAGAATGCGATTCCTAGACGGCCTTACAAGGAGCGAGCTCAGCCGCATTCTCGGAAAAAATTT
GGGCTTCTTGAGAAGCACAAAGATTATATCGAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGA
ATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTCCATAAGCCAGAGAGTCATGTTAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATG
CAGGGTATATACTTCAGAAAATGCAGAGTGAGAAAAGGAAAATTGAAAAACTGACGGCAACGTTGCATTCTCTTGATAATCAGCCATCAAATAAGCATCTTTACTTTGTC
GAAGACAGGGAGGAAGCCAATGAAATTCTATCTCGCTCTTCTAAAGGATTGGTGGCATCTTCTGAGGCAGTTCCTGATAGTATTAAAAGGAAAACCATTTCTTCTTACAA
AGAATTGGAGGCAAGGAGAAGTAGAGTCGGTGAATTAGAGAAACTTTATATGGATATGACACTGCAACAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGAGAAG
ATGAACTTGCCAATCCAACTTCAAAACCTGTATATAAATGGCGGGCAGAACGAAAGCGCTAAAAGTCCCTTGCCCAAGCATGTTCTGCAAGATGTAGTTGCAATTTCCAA
GGAAACTGGACGAAGCATTGTTTACCATGCAAATCCTTTGAAAAGTTGGTTGAAATCACACAGGGACCTCATTCTGGTTCCGTAATTCAATTTACAAATTTTGTTTTCGT
AGCTAACTAGTTAAACCATGCTGTGTTTCTTCTGGGATGAAGAATGTAATCAGTTTGTTGTTACTATTATTTATTGAGGAATATAGTTCTTGTTTGTTTTTGGATTGTTT
TGTTTTTTTGACAATGTGTGGATGGAAAAATAGAATCTCTAATTTCAAGACTGATAATACAAAATTTATGTGGGTAGAACTATGCTCATGTTGGCTATTTTCAATTTAGT
TTGATTCAAGTTAAAGGATCTGTCAAGCACCTTTAATAGAGAAAGGAAAGAGACGGTAAGAGGGAAGAGAAATGCATACTCTCTTTTTCTTTTACCATACATTTTTTTTA
ACGTTCTTTTACCCTACATAAATGAAAAAACAATTAACCAA
Protein sequenceShow/hide protein sequence
MSSLKNAIPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEK
RKIEKLTATLHSLDNQPSNKHLYFVEDREEANEILSRSSKGLVASSEAVPDSIKRKTISSYKELEARRSRVGELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVY
KWRAERKR