; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G12360 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G12360
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:21108652..21112521
RNA-Seq ExpressionClc11G12360
SyntenyClc11G12360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]6.3e-1974.58Show/hide
Query:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCNI
        CI    KGDVLN++CVRPCSDTYDDESCYN C+REN  AGFCYPKLP  S +KDCCCN+
Subjt:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCNI

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]4.5e-1778.85Show/hide
Query:  KGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN
        KGDVLNMHCV+PCSDTYDDESCYN C++EN  AGFCYPKLP  S +KDCCC+
Subjt:  KGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]4.7e-1462.96Show/hide
Query:  NVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN
        + KGD+  M C+RPC D +DD+SCY+ CVR N  AGFCYPKLP+++ EKDCCCN
Subjt:  NVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]4.7e-0646.55Show/hide
Query:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN
        C   +++GD L  +CV PCS+   D  C   C+ ++  AGFC PKLP IS  K CCCN
Subjt:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]2.2e-1974.58Show/hide
Query:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCNI
        CI    KGDVLN+HCVRPCSDTYDDESCYN C++EN  AGFCYPKLP  S +KDCCCN+
Subjt:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCNI

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein2.3e-0646.55Show/hide
Query:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN
        C   +++GD L  +CV PCS+   D  C   C+ ++  AGFC PKLP IS  K CCCN
Subjt:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN

A0A0A0LHG9 Uncharacterized protein1.1e-1974.58Show/hide
Query:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCNI
        CI    KGDVLN+HCVRPCSDTYDDESCYN C++EN  AGFCYPKLP  S +KDCCCN+
Subjt:  CIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCNI

A0A0A0LJG5 Uncharacterized protein2.4e-1966.67Show/hide
Query:  LLLVAFPRSPSTSWCIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN
        ++LV FP       CI    KGDVLN+HCVRPC DTYDDESCYN C+REN  AGFCYPKLP  S +KDCCCN
Subjt:  LLLVAFPRSPSTSWCIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCN

A0A0A0LKF5 Uncharacterized protein1.5e-1879.25Show/hide
Query:  KGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCNI
        KGD+LN+HCVRPCSDTYDDESCYN C+REN  AGFCYPKLP  S +KDCCCN+
Subjt:  KGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAGFCYPKLPNISGEKDCCCNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAATCGGGAGAGAGAACTCCATACTAACCAAAATGCCCATGAAGTCATGGTGGAGCGGCGCTTTTTCCCGAAAGCTTCTGCTGGCAAAACACAGCAAGTGTTG
TGATACTACCTTGGAGCACTGCGGCGCTCTGGAAAGACATCGAACCCACGTCTACCGCCGCTCACCGTCGCCGTGCCGCCGAGTTCGCCACCGTCTGCACGCCTTGTACC
TCGCCGACATTCGCACAGCTCTGTCGCCGTCATCCGCACAGGAATCGTCGGGTCCAATAGCCGCCGTTCGGGTGCGCGAGGAGCAACGGGCTGTCGACGCTCAGATTTCC
GGTATCACCGCCAGTCATTTTGCCGGTTTGCCTTGGGTTTTGCTCCTCTCGGTTGCCGTAGGTAGCGTCGCCGCCGGATTTGTGGTTTTAGGATGTAAGTGGGTCGAGTC
GAGACCTGACCTGTTCAAATCAATTCAGTTGCATCCCGTTCCTAGTTCCTACTGTCCCCTTCTTCTAGTCGCATTTCCACGATCCCCTTCAACATCTTGGTGCATACCAA
AAAATGTGAAAGGAGACGTGTTGAACATGCATTGTGTTCGACCATGTTCTGACACTTATGACGACGAGTCATGTTATAATGGTTGTGTCCGAGAGAATAATAGTGCTGGA
TTTTGTTACCCAAAGCTACCTAACATTTCTGGTGAAAAAGATTGTTGTTGCAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAATCGGGAGAGAGAACTCCATACTAACCAAAATGCCCATGAAGTCATGGTGGAGCGGCGCTTTTTCCCGAAAGCTTCTGCTGGCAAAACACAGCAAGTGTTG
TGATACTACCTTGGAGCACTGCGGCGCTCTGGAAAGACATCGAACCCACGTCTACCGCCGCTCACCGTCGCCGTGCCGCCGAGTTCGCCACCGTCTGCACGCCTTGTACC
TCGCCGACATTCGCACAGCTCTGTCGCCGTCATCCGCACAGGAATCGTCGGGTCCAATAGCCGCCGTTCGGGTGCGCGAGGAGCAACGGGCTGTCGACGCTCAGATTTCC
GGTATCACCGCCAGTCATTTTGCCGGTTTGCCTTGGGTTTTGCTCCTCTCGGTTGCCGTAGGTAGCGTCGCCGCCGGATTTGTGGTTTTAGGATGTAAGTGGGTCGAGTC
GAGACCTGACCTGTTCAAATCAATTCAGTTGCATCCCGTTCCTAGTTCCTACTGTCCCCTTCTTCTAGTCGCATTTCCACGATCCCCTTCAACATCTTGGTGCATACCAA
AAAATGTGAAAGGAGACGTGTTGAACATGCATTGTGTTCGACCATGTTCTGACACTTATGACGACGAGTCATGTTATAATGGTTGTGTCCGAGAGAATAATAGTGCTGGA
TTTTGTTACCCAAAGCTACCTAACATTTCTGGTGAAAAAGATTGTTGTTGCAATATTTGA
Protein sequenceShow/hide protein sequence
MASIGRENSILTKMPMKSWWSGAFSRKLLLAKHSKCCDTTLEHCGALERHRTHVYRRSPSPCRRVRHRLHALYLADIRTALSPSSAQESSGPIAAVRVREEQRAVDAQIS
GITASHFAGLPWVLLLSVAVGSVAAGFVVLGCKWVESRPDLFKSIQLHPVPSSYCPLLLVAFPRSPSTSWCIPKNVKGDVLNMHCVRPCSDTYDDESCYNGCVRENNSAG
FCYPKLPNISGEKDCCCNI