CuGenDBv2

Gene ID	Clc11G12960
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	RNA-binding KH domain-containing protein PEPPER
Genome location	ClcChr11:22854720..22869274
RNA-Seq Expression	Clc11G12960
Synteny	Clc11G12960
Gene Ontology terms	GO:0006396 - RNA processing (biological process) GO:0009299 - mRNA transcription (biological process) GO:0010468 - regulation of gene expression (biological process) GO:0048467 - gynoecium development (biological process) GO:0048577 - negative regulation of short-day photoperiodism, flowering (biological process) GO:0048579 - negative regulation of long-day photoperiodism, flowering (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0003729 - mRNA binding (molecular function)
InterPro domains	IPR004087 - K Homology domain IPR004088 - K Homology domain, type 1 IPR036612 - K Homology domain, type 1 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7029848.1 RNA-binding KH domain-containing protein PEPPER [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-228

91.22

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI
        +NGSTDANALN NP++S L+S+AAAEPDS EAGGA+SD+DPSNQDYLS PASDSA H E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI

Query:  KKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR
        KKMCEETRARIRVLDGAVGTPDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS+R
Subjt:  KKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR

Query:  VLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE
        VLSGDEMPFYAG DERMVELQGESLKVLKALE VVGHLRKFLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQSVISAEYP STKRESL+LDRE
Subjt:  VLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE

Query:  THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ
         +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTS+QVQMAQ
Subjt:  THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ

Query:  QLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        QLIQEAVSAPKE VTSSSYGRLDT+G+RSSYSQL A+GSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Subjt:  QLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

TYK03085.1 RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa]

3.9e-234

94.21

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
        +NGSTDA A   NPQ+STL SLAAAE DSTE G  DSDIDPSNQDY S+P SDSAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK

Query:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
        KMCEETRARIRVLDGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
Subjt:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV

Query:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET
        LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRESLFLDRET
Subjt:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET

Query:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
        HLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
Subjt:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ

Query:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        LIQEAV+APKE VTSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Subjt:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

XP_004149510.2 RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus]

3.3e-233

93.99

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
        ENGSTDA     NP +STL SLAAAEPDSTEAG  DSD DPSNQDY SVP SDSAAHE  NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK

Query:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
        KMCEETRARIRVLDGAVGTPDRVVLISGKEELE+PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
Subjt:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV

Query:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET
        LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEY PSTKRESLFLDRE 
Subjt:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET

Query:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
        H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
Subjt:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ

Query:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        LIQEAV+APKE VTSSSYGRLDT GLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGY+TFRL
Subjt:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

XP_022996845.1 RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima]

2.4e-228

91.43

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI
        +NGSTDANALN NP++S L+S+AAAEPDS EAGGA+SD+DPSNQDYLS PASDSA H E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI

Query:  KKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR
        KKMCEETRARIRVLDGAVGTPDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS+R
Subjt:  KKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR

Query:  VLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE
        VLSGDEMPFYAGADERMVELQGESLKVLKALE VVGHLRKFLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQSVISAEYP STKRESL+LDRE
Subjt:  VLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE

Query:  THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ
         +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ
Subjt:  THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ

Query:  QLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        QLIQEAVSAPKE VTSSSYGRL+ +G+RSSYSQL ASGSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Subjt:  QLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

XP_038890982.1 RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]

2.9e-245

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Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
        ENGSTDANALNSNPQ+STLSSLAAAEPDSTEAGG +SDIDPSN+DYLSVPASDSAA+EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK

Query:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
        KMCEETRARIRVLDGAVGTPDRVVLISGKEEL+APLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
Subjt:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV

Query:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET
        LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP SQDRQ +TWADKSSLLTASQS+IS EYPPSTKRESLFLDRET
Subjt:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET

Query:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
        HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
Subjt:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ

Query:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        LIQEAVSAPKE VTSSSYGRLD  GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
Subjt:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMH4 Uncharacterized protein

1.6e-233

93.99

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
        ENGSTDA     NP +STL SLAAAEPDSTEAG  DSD DPSNQDY SVP SDSAAHE  NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK

Query:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
        KMCEETRARIRVLDGAVGTPDRVVLISGKEELE+PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
Subjt:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV

Query:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET
        LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEY PSTKRESLFLDRE 
Subjt:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET

Query:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
        H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
Subjt:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ

Query:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        LIQEAV+APKE VTSSSYGRLDT GLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGY+TFRL
Subjt:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

A0A1S4E0X0 RNA-binding KH domain-containing protein PEPPER

2.0e-228

91.91

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
        +NGSTDA A   NPQ+STL SLAAAE DSTE G  DSDIDPSNQDY S+P SDSAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK

Query:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
        KMCEETRARIRVLDGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
Subjt:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV

Query:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET
        LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRESLFLDRET
Subjt:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET

Query:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRS----GGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQ
        HLDSHI SSGISLYGQDRVLPTIRSSGVGRS       ++  VTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQ
Subjt:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRS----GGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQ

Query:  MAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        MAQQLIQEAV+APKE VTSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Subjt:  MAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

A0A5D3BVI2 RNA-binding KH domain-containing protein PEPPER

1.9e-234

94.21

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
        +NGSTDA A   NPQ+STL SLAAAE DSTE G  DSDIDPSNQDY S+P SDSAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIK

Query:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
        KMCEETRARIRVLDGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV
Subjt:  KMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV

Query:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET
        LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRESLFLDRET
Subjt:  LSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET

Query:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
        HLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ
Subjt:  HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ

Query:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        LIQEAV+APKE VTSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Subjt:  LIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

A0A6J1EV22 RNA-binding KH domain-containing protein PEPPER-like

7.7e-228

91.01

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI
        +NGSTDANALN NP++S L+S+AAAEPDS EAGGA+SD+DPSNQDYLS PASDSA H E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI

Query:  KKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR
        KKMCEETRARIRVLDGAVGTPDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS+R
Subjt:  KKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR

Query:  VLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE
        VLSGDEMPFYAGADERMVELQGESLKVLKALE VVGHLRKFLVD SVLPLFEKSFN P SQDRQ + WADKSSLLT+SQSVISAEYP STKRESL+LDRE
Subjt:  VLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE

Query:  THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ
         +LDS+IPSSGISLYGQ+RVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ
Subjt:  THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ

Query:  QLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        QLIQEAVSAPKE VTSSSYGRLDT+G+RSSYSQL A+GSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Subjt:  QLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

A0A6J1K7W7 RNA-binding KH domain-containing protein PEPPER-like

1.2e-228

91.43

Show/hide

Query:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI
        +NGSTDANALN NP++S L+S+AAAEPDS EAGGA+SD+DPSNQDYLS PASDSA H E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI
Subjt:  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLI

Query:  KKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR
        KKMCEETRARIRVLDGAVGTPDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS+R
Subjt:  KKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR

Query:  VLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE
        VLSGDEMPFYAGADERMVELQGESLKVLKALE VVGHLRKFLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQSVISAEYP STKRESL+LDRE
Subjt:  VLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE

Query:  THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ
         +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ
Subjt:  THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQ

Query:  QLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
        QLIQEAVSAPKE VTSSSYGRL+ +G+RSSYSQL ASGSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Subjt:  QLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

SwissProt top hits

e value

%identity

Alignment

F4KDN0 KH domain-containing protein HEN4

8.7e-19

24.87

Show/hide

Query:  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVAS
        D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E  E   SPA  A++ +F R+  L+ N+  D    S  + RL+V +
Subjt:  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVAS

Query:  TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQ---DRQTET----
        +Q   ++GK G ++  ++++TGA++++L  ++ P     ++++V++ GE   V +A+  +   LR  +  +S+     KS +  T++   DRQ++     
Subjt:  TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQ---DRQTET----

Query:  -----------------WADKSSLLTASQSVI----SAEYPPSTKRESLFLDR----------------ETHLDS--HI------------PSSGISLYG
                            + S L+ S S +    S    P  + E  F DR                  H D+  H+            P++   L  
Subjt:  -----------------WADKSSLLTASQSVI----SAEYPPSTKRESLFLDR----------------ETHLDS--HI------------PSSGISLYG

Query:  QDRVLPTIRSSGVGRSG--GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQE-SRGLPDEITVEIKGTSSQVQMAQQLI
            L + R+  V  SG    IVT  T  +++P +    + G  G N+  +R+ SGA + I E   G  D I V I GT  Q Q AQ L+
Subjt:  QDRVLPTIRSSGVGRSG--GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQE-SRGLPDEITVEIKGTSSQVQMAQQLI

P57721 Poly(rC)-binding protein 3

8.7e-19

28.61

Show/hide

Query:  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLV
        RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G            DA+ + F  ++   E        N         ++RL+V
Subjt:  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLV

Query:  ASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP---------TSQDR
         ++Q  +LIGK GS IK I+ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   K  +TP         T Q +
Subjt:  ASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP---------TSQDR

Query:  QTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA
              D+ + L    ++    +PP  +    F   +  L  H      +L GQ        SSG+  S        T  + IP      IIG  GT I 
Subjt:  QTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA

Query:  FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA
         IR+ SGA + I  +     E  + I GT + + +AQ LI   +++
Subjt:  FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA

P57722 Poly(rC)-binding protein 3

8.7e-19

28.61

Show/hide

Query:  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLV
        RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G            DA+ + F  ++   E        N         ++RL+V
Subjt:  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLV

Query:  ASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP---------TSQDR
         ++Q  +LIGK GS IK I+ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   K  +TP         T Q +
Subjt:  ASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP---------TSQDR

Query:  QTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA
              D+ + L    ++    +PP  +    F   +  L  H      +L GQ        SSG+  S        T  + IP      IIG  GT I 
Subjt:  QTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA

Query:  FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA
         IR+ SGA + I  +     E  + I GT + + +AQ LI   +++
Subjt:  FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA

Q9SR13 Flowering locus K homology domain

1.2e-71

38.42

Show/hide

Query:  PSRTLLPPPLPSSDFSLHRRRCLLLQFSRENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEG-PNH--------
        P +TL P      D   + +  L  Q + +      + L   PQ      L     D  +   A  D+   N D +     D    EG P H        
Subjt:  PSRTLLPPPLPSSDFSLHRRRCLLLQFSRENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEG-PNH--------

Query:  ------TGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKR-VSGLSE
               G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R V++SGKEE E+ L P+MD ++RV  R V GL  
Subjt:  ------TGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKR-VSGLSE

Query:  NEDEA-KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSF
           +A   S  S RLLV ++QA +LIGKQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFLVD S++P FE   
Subjt:  NEDEA-KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSF

Query:  NTPTSQ-DRQTETWADKSSLLTASQSVISAEY--------PPSTKRESLFLDRETHLD--SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTM
          PT Q D               + SV    Y         P  + +S +   E         P  GIS YG++  +    +  V  +   +  QVTQ M
Subjt:  NTPTSQ-DRQTETWADKSSLLTASQSVISAEY--------PPSTKRESLFLDRETHLD--SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTM

Query:  QIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSS
        QIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLIQ  ++   EA   +       A  +  Y+  A  GS Y ++
Subjt:  QIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSS

Query:  SLSSQSYGGYGSSGLGGY
          +    GGY +    GY
Subjt:  SLSSQSYGGYGSSGLGGY

Q9SZH4 RNA-binding KH domain-containing protein PEPPER

1.9e-122

56.14

Show/hide

Query:  LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIR
        L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEETRARI+VLDG V TPDR+VLISGKEE EA +SPAMDAV+R
Subjt:  LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIR

Query:  VFKRVSGLSENEDE----AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFL
        VF+RVSGL +N+D+    A + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQGE+LK+LKALE +VGHLR+FL
Subjt:  VFKRVSGLSENEDE----AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFL

Query:  VDHSVLPLFEKSFNTPTSQDRQTETWAD-KSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVT
        VDH+V+PLFEK +    SQ RQ E  A+ KSSL T S +++  ++    +RE LFL+R++ +DS +  SG+S+Y QD VL    S G+ R     VTQV+
Subjt:  VDHSVLPLFEKSFNTPTSQDRQTETWAD-KSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVT

Query:  QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVT-SSSYGRLDTAGL-------------
        QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+QLIQE +   KE V+ S  Y R+D+  +             
Subjt:  QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVT-SSSYGRLDTAGL-------------

Query:  --------------RSSYSQLAASGSSYTSSSLSSQSYGG--YGSSGLGGYSTFRL
                       ++YSQL   G S  + +L+ Q+YG     +S +GGYS++ L
Subjt:  --------------RSSYSQLAASGSSYTSSSLSSQSYGG--YGSSGLGGYSTFRL

Arabidopsis top hits

e value

%identity

Alignment

AT1G51580.1 RNA-binding KH domain-containing protein

3.2e-24

27.41

Show/hide

Query:  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQ
        +  FRL+ P  KVGS+IG+ G +++ +  E+ A I+V D    + +R+++IS +E LE   S A D V+RV  R+  +      A  +    RLLV S  
Subjt:  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQ

Query:  AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSV--------LPLFEKSFNTPTSQ--DRQTE
           L+GK G LI  ++ +TGAS+RV + D+   Y    + +V++ G    V  AL  ++  LR+ +    +         P F   +  P      RQ  
Subjt:  AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSV--------LPLFEKSFNTPTSQ--DRQTE

Query:  TWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLP------TIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT
           D+               P   +      DR     S  P  GI  +    V P       +R+  +G S  P++T     + IP +Y   + G   +
Subjt:  TWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLP------TIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT

Query:  NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI
        N+ +I++ SGA + + + +    E  V + GTS Q   AQ L+
Subjt:  NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI

AT3G04610.1 RNA-binding KH domain-containing protein

8.2e-73

38.42

Show/hide

Query:  PSRTLLPPPLPSSDFSLHRRRCLLLQFSRENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEG-PNH--------
        P +TL P      D   + +  L  Q + +      + L   PQ      L     D  +   A  D+   N D +     D    EG P H        
Subjt:  PSRTLLPPPLPSSDFSLHRRRCLLLQFSRENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEG-PNH--------

Query:  ------TGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKR-VSGLSE
               G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R V++SGKEE E+ L P+MD ++RV  R V GL  
Subjt:  ------TGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKR-VSGLSE

Query:  NEDEA-KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSF
           +A   S  S RLLV ++QA +LIGKQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFLVD S++P FE   
Subjt:  NEDEA-KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSF

Query:  NTPTSQ-DRQTETWADKSSLLTASQSVISAEY--------PPSTKRESLFLDRETHLD--SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTM
          PT Q D               + SV    Y         P  + +S +   E         P  GIS YG++  +    +  V  +   +  QVTQ M
Subjt:  NTPTSQ-DRQTETWADKSSLLTASQSVISAEY--------PPSTKRESLFLDRETHLD--SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTM

Query:  QIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSS
        QIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLIQ  ++   EA   +       A  +  Y+  A  GS Y ++
Subjt:  QIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSS

Query:  SLSSQSYGGYGSSGLGGY
          +    GGY +    GY
Subjt:  SLSSQSYGGYGSSGLGGY

AT4G26000.1 RNA-binding KH domain-containing protein

1.3e-123

56.14

Show/hide

Query:  LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIR
        L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEETRARI+VLDG V TPDR+VLISGKEE EA +SPAMDAV+R
Subjt:  LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIR

Query:  VFKRVSGLSENEDE----AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFL
        VF+RVSGL +N+D+    A + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQGE+LK+LKALE +VGHLR+FL
Subjt:  VFKRVSGLSENEDE----AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFL

Query:  VDHSVLPLFEKSFNTPTSQDRQTETWAD-KSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVT
        VDH+V+PLFEK +    SQ RQ E  A+ KSSL T S +++  ++    +RE LFL+R++ +DS +  SG+S+Y QD VL    S G+ R     VTQV+
Subjt:  VDHSVLPLFEKSFNTPTSQDRQTETWAD-KSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVT

Query:  QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVT-SSSYGRLDTAGL-------------
        QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+QLIQE +   KE V+ S  Y R+D+  +             
Subjt:  QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVT-SSSYGRLDTAGL-------------

Query:  --------------RSSYSQLAASGSSYTSSSLSSQSYGG--YGSSGLGGYSTFRL
                       ++YSQL   G S  + +L+ Q+YG     +S +GGYS++ L
Subjt:  --------------RSSYSQLAASGSSYTSSSLSSQSYGG--YGSSGLGGYSTFRL

AT5G46190.1 RNA-binding KH domain-containing protein

1.0e-19

29.22

Show/hide

Query:  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVG-TPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAIN
        ++I    K+G +IG+ G  IK + + + + I V D       D V+ ++  E  +   S A++AV+ + ++++   E+ED+ K     ++LLV+S     
Subjt:  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVG-TPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAIN

Query:  LIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSL--LTA
        +IGK GS+I  I++ T A + +  G+  P  A  ++ +VE+ GE   V  AL  +V  LR    D  +      S N P ++      ++  SS   L  
Subjt:  LIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSL--LTA

Query:  SQSVISAEYPPSTKRESLFLDRETHLD-SHIPSS-GISLYGQDRVLPTIRSSGVGRSG---GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAI
         QS +S+   P           ET    S +PSS GI  YG   V  T   S    S    G +    T  ++IP +    ++G GG N+  IRR SGA+
Subjt:  SQSVISAEYPPSTKRESLFLDRETHLD-SHIPSS-GISLYGQDRVLPTIRSSGVGRSG---GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAI

Query:  LTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ
        + I +S+         I GTS Q + A+ L Q
Subjt:  LTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ

AT5G64390.1 RNA-binding KH domain-containing protein

6.2e-20

24.87

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Query:  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVAS
        D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E  E   SPA  A++ +F R+  L+ N+  D    S  + RL+V +
Subjt:  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVAS

Query:  TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQ---DRQTET----
        +Q   ++GK G ++  ++++TGA++++L  ++ P     ++++V++ GE   V +A+  +   LR  +  +S+     KS +  T++   DRQ++     
Subjt:  TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQ---DRQTET----

Query:  -----------------WADKSSLLTASQSVI----SAEYPPSTKRESLFLDR----------------ETHLDS--HI------------PSSGISLYG
                            + S L+ S S +    S    P  + E  F DR                  H D+  H+            P++   L  
Subjt:  -----------------WADKSSLLTASQSVI----SAEYPPSTKRESLFLDR----------------ETHLDS--HI------------PSSGISLYG

Query:  QDRVLPTIRSSGVGRSG--GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQE-SRGLPDEITVEIKGTSSQVQMAQQLI
            L + R+  V  SG    IVT  T  +++P +    + G  G N+  +R+ SGA + I E   G  D I V I GT  Q Q AQ L+
Subjt:  QDRVLPTIRSSGVGRSG--GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQE-SRGLPDEITVEIKGTSSQVQMAQQLI

Sequences

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CDS sequence

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mRNA sequence

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ATGTTACTCTCTCTCTCTCTCTCTCGGTTTTACTCAGCCGACAGCACCTCTCTAACTTGTTTCTCTCTCAGCTACTCCTCCTCACATCGCCGCCGTTGCTGCTGTGCCGC
CGCCATCGGATCTCCCTCTCGAACGCTGCTACCACCGCCGCTGCCGTCGTCGGATTTCTCTCTTCACCGCCGCCGCTGTCTTTTACTGCAATTCAGTCGGGAGAATGGCT
CCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCAACACTTTCCTCTCTAGCTGCTGCAGAACCAGACTCTACCGAAGCTGGTGGCGCTGATTCCGACATCGAT
CCTTCTAACCAAGACTACTTATCCGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCTGGAGACTG
CGTCTTCAGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGTAAGGGCGATCTTATTAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTG
ATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTGATTTCAGGAAAAGAAGAGCTTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTG
TCAGGGTTATCTGAGAATGAAGATGAGGCTAAGGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATTTAATTGGAAAGCAGGGTTCATTAAT
TAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTATTATCAGGAGATGAGATGCCATTCTATGCCGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCT
TAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCACAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTACCTCACAA
GATCGGCAAACAGAGACCTGGGCTGACAAGTCCTCACTTCTCACTGCATCTCAAAGTGTAATCTCCGCTGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGA
CCGGGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGAC
CTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTAGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCC
ATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAG
TGCCCCGAAGGAAGCAGTTACAAGCAGCAGCTATGGCAGGCTAGACACAGCAGGGTTGAGGTCATCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTT
CTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGAATTTGATTGATCTGCAGAGATTCATATCCACTCGGATTT
GATCCACTTTGGATTCATTAATTCTTGCTAAGAGAATGAATGAATTATGTTGGAATCTAGTTGTTGTAAAGTCAGCCTAAAGTAGTTAAAAACGTTTTTTTTTACCCTCT
CTGGCATATTCAAACTCATTCAGCTGGGTAGATTTGTCTTGTGTCTTCCCTTTTTTTTTTTTTTTCAGTGCTAAATGTGTTTGTTTCTTAGGTTTTTTTCCCCCTTTTTT
CTTTTTATATCTTTTTTATGTCAACCGCTTCAGGTCATCAAGTTTTCAGGTGAACCTTTTCTTATTTTTCACTTATTTAGGAGGATTCAGATTAACTTAACTATTGAAAT
TCTGGAGTGCATCTTAGAATTATTCTTGAGTTGATAGATTGGTAAATGGACTGCTGAATTCAACCCCCATAATGAGGAAAGTGAAATTTTGGAGGGGTGGGGGTGAGAGT
ATTTTAGTCTAAACCAAAATTAAAATAGAATCCAACCTTTAAGAAAATATTGATATATTCCAAACTCTCCAAACATTAAAAATTAAAAAAAAAAAATTAAATTCAAGCCA
TCTAAGGATGATATCAAATTAAGAAAAATTGTTACATTCATATTCAATTCCATATTAAATGAGTGAAACTGAGAATGAAAACGTTCAACAAATAATGTAGAAAAAGTTAT
TATTGAAAAAACTGATTGAAATATAGCTCTAATTGTATAATATATACATAAAAAAAAGTTGGAAAAAGAAAAAGAAAAAGTTAGCATACATATACTCATTCAAAATACAA
ACAACTTCTGAAACTTAGACCAAACAACCAAACAACTCTAACATAAACACAAGCTTCTTAGACTATCAATTCAGTATCCCAAATGCAGGAATTTTTTAACTCTAGACTGA
TTAACTCTCCAAATTTAATAACTCAACTTATTGTTCTAATCTCCTTTCAATCTTTGTTAATTAAAATGATTTAAACTAAAATTAATAATTATATAAATAAAAGTAAGCTT
TTTATAGTTTAAATCTATTTTGTATGGTTCTGGCTCTGTATGGTTTTAAATTATGTAAATTTTGTAATTATTAGTGACATGTTCTGTAAATTAAAGATTTAACAAATAGA
AAAAATAGTAAAAGAAAAAAAAAACTCCCTTGGTCATTTTTTTCCAATTTTTGTAGAGCCTTTGGTTTTTACGGTCTCATTGGATAATATTTTTGTTTTCTGTTTCCTAT
TTTTTTTAAGAACTAAAAATTAGAATATGTTTGACAACTATTTATGTTTCATGTTTCTTGAAGGAAAAAAAAAAAAAATAGAAACTTGTTTGATAACTATTTTTTGTTTT
TTATTTGGCTTTTCTTTTCTGCTTTTGTAATTTAAACATAATTTAATTATATAATATAAAAGTACATAATATGCTTCAAAACATATTAAAAGGAAATTATCCAAAGCTTA
CATTAATTAATACAAATTAGTTTCAATGCAAAATTAACCGTAATTATAGAATTGTATTTATCCTTCAAATGTTCCTCAAATTTGTAATGTTAAAATTCATTTGAGTCATT
TGTCTCAAATGGTATTGACTCAAATTCAACTTAATTATATTGCTATGTAAATGTTACGGTAGAAAATGTTAAAGTTTATATATTGCAAAATTAAAAGTCGAAATGAGCAT
ATAACTTGATGGATACAAAGCTTTTACGTGCGACTTAAAAGTTAGAGGATTAATTTTTCTCCCACCCCACTTGTAGAAAAAATAAAAATTAAAATGATGTAAAACATATA
TTTCAAATTTCAAATTCCAAATTTATAATTCATATAGTATATAAATATTCAATATTGAAAATTAAGAAGTTAAGATAAATTAAAATAATATATAATTACAACAGATTGCA
AAAATAAGAATTCAAGCAATATATAAATGCACATATGGCAAAATAAAAATAATAAAATAGATAAGAAATGCAACCAAGTTTCGAACCCACGAACTGGAGTCACTAGGACG
AGCACAAGTGCCAAAACCATAAGACTGCATTACTCTTTTATATTGTGATAATAATATATAAAAACAAACAGAAGCTACTTGGTCCACTTTTAACAATGTTTATTTCAAAT
CCAGAAACAAAACACAAAAAAGGGGAGATTTTTTTTAATTGTTTTACAAAAAGAAAAAAATTAATAAAAACAAAATCGGTCACCATTAAAAGGCCCTATGGCCAACAATG
AAAGAAAAACCGCCAAATTTTTTACAAACCTAAAGAGGGAAGTGATGAAGCCATAATGCGCTCAATCCCGAGAATCCCAAACGAGCTAGCAAATGAGTTGATTGGTTTGA
ATGACAAGGCACAAACTGAAAAGTAATTTAAGTAAAGGAGAATATTCGTAGTATAATTGGCCACATCTACATGTATAGTTGCTTGACCCTTGAGCATTTGAACCTACCAT
TAAAGAGTCTGATAACACCATCACCCGAGTGAGACCTAACCGCTCCACTAAACATAGACCTTTAAAATTTACAAATACTTCAACACACACAAGGTTCAAAGATATCTCCT
TAAACTTATGCACAACCATTGGGATGGAGCCTGTTAAGGACCCAACAATCCCGTCGAACCCAACTCTATTAATCCCCTCTAAACAAGCTGTATCCACTTGGGCAATACTT
AATCCATCCTCCAAGAAAACCATACGAAGGAGAATCCTTCAGAATAGGAGTCAAAGACTCCTTCGACAATGAACTAACTTCTGCCACATAATCTAGGAATACAAGCTCTA
GCAAGCTCCTCATTGCTCAGATGATCAAACAACATCAACCATGTATTCGAACAATTAAGACGTTCAAATTTAGAATTCCACACTGCTAAAAAAAGTTTGTTCCATATATA
CTTAGCTCAATAATACACAAATAAAGTGTGAGCGCCTGTTTCCTCCTTACATTTATAGTTTGGACACCAAGGATTCACATCTACTTTCCTTCTTCTAAGAGAGACTATAG
TGGAAATTTAGTTATGACACAACCTCTAGACAAAAAGAGCAACCTTACTTTGAATTTGTAGCTTCCAGTACCTTTTTCTACCA

Protein sequence

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MLLSLSLSRFYSADSTSLTCFSLSYSSSHRRRCCCAAAIGSPSRTLLPPPLPSSDFSLHRRRCLLLQFSRENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDID
PSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRV
SGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQ
DRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGA
ILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

Clc11G12960 (gene) of Watermelon (cordophanus) v2 genome