; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G13340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G13340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDNA repair protein XRCC3 homolog
Genome locationClcChr11:23778351..23779426
RNA-Seq ExpressionClc11G13340
SyntenyClc11G13340
Gene Ontology termsGO:0000722 - telomere maintenance via recombination (biological process)
GO:0045003 - double-strand break repair via synthesis-dependent strand annealing (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0071140 - resolution of mitotic recombination intermediates (biological process)
GO:0090656 - t-circle formation (biological process)
GO:0005657 - replication fork (cellular component)
GO:0033065 - Rad51C-XRCC3 complex (cellular component)
GO:0000400 - four-way junction DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR013632 - DNA recombination and repair protein Rad51-like, C-terminal
IPR016467 - DNA recombination and repair protein, RecA-like
IPR020588 - DNA recombination and repair protein RecA-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR033925 - Rad51/DMC1/RadA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020901.1 DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-14690.1Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCPIIDRSVGGGVAC+SLTEIV+ESGCGKTQLCLQL  CAQLPLS GGLNA+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ S
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSA QLFDIMPKIE FL NR+S LP RLIVIDSIAALFRSDF NTPSDLKRRS+LFFKISGKLKLLAK+YSLAVVLTNQVVDLM SSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ
        +NALRIGNLK LCSS RRVCPALG+AWANCVNSRLFLSRNEEVVGEGDG++N  EL QRRTRRWLHVVFAPHLPKSSCEYVI R+GVVGVESQ
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ

TYK01347.1 DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa]1.8e-15394.54Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFS
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSAHQLFDIMPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES
        LNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRNEEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLP+SSCEYVI REGVVGVES
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES

XP_004150781.1 DNA repair protein XRCC3 homolog [Cucumis sativus]1.0e-15696.6Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSAHQLFDIMPKIE  L+NRNSQLPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQ-RRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ
        LNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRNEEVVGEG+GMMNGSEL+Q RRTRRWLHVVFAPHLPKSSCEYVI REGVVGVESQ
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQ-RRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ

XP_008451720.1 PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo]2.8e-15495.22Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSAHQLFDIMPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES
        LNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRNEEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLPKSSCEYVI REGVVGVES
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES

XP_038890688.1 DNA repair protein XRCC3 homolog [Benincasa hispida]9.1e-15393.86Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCPIIDRS GGGVACSSLTEIVAESGCGKTQLCLQLSL AQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSAHQLFDIMPKIE FL+N NSQLPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAK+YSL VVLTNQVVDL+GSSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ
        LNALRIGNLKFL SS R+VCPALGLAWANCVN+RLFLSRNEE+VGEG+GMMNGSEL+QRRTRRWLHVVFAPHLPKSSCEYVI REGVVGVESQ
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ

TrEMBL top hitse value%identityAlignment
A0A0A0LK93 RECA_2 domain-containing protein5.0e-15796.6Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSAHQLFDIMPKIE  L+NRNSQLPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQ-RRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ
        LNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRNEEVVGEG+GMMNGSEL+Q RRTRRWLHVVFAPHLPKSSCEYVI REGVVGVESQ
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQ-RRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ

A0A1S3BRJ5 DNA repair protein XRCC3 homolog1.4e-15495.22Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSAHQLFDIMPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES
        LNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRNEEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLPKSSCEYVI REGVVGVES
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES

A0A5A7UPR6 DNA repair protein XRCC3-like protein1.4e-15495.22Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSAHQLFDIMPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES
        LNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRNEEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLPKSSCEYVI REGVVGVES
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES

A0A5D3BPT7 DNA repair protein XRCC3-like protein8.9e-15494.54Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFS
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSAHQLFDIMPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES
        LNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRNEEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLP+SSCEYVI REGVVGVES
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES

A0A6J1FDM2 DNA repair protein XRCC3 homolog1.4e-14690.1Show/hide
Query:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLL+LLQTTQKCTFGCPIIDRSVGGGVAC+SLTEIV+ESGCGKTQLCLQL  CAQLPLS GGL A+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ S
Subjt:  MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG
        NPSDHIFVEPVHSA QLFDIMPKIE FL NR+S LP RLIVIDSIAALFRSDF NTPSDLKRRS+LFFKISGKLKLLAK+YSLAVVLTNQVVDLM SSDG
Subjt:  NPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDG

Query:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ
        +NALRIGNLK LCSS RRVCPALG+AWANCVNSRLFLSRNEEVVGEGDG++NG EL QRRTRRWLHVVFAPHLPKSSCEYVI R+GVVGVESQ
Subjt:  LNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ

SwissProt top hitse value%identityAlignment
O15315 DNA repair protein RAD51 homolog 21.2e-2731.56Show/hide
Query:  IDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFV--EPVHSAHQLF--
        +D ++ GGVAC SLTEI    GCGKTQ C+ +S+ A LP + GGL  + +YI TE  F   RL ++++   S +P++ N  + + +    VH   +L   
Subjt:  IDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFV--EPVHSAHQLF--

Query:  DIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDF-GNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQV-----------VDLMGSSDGLNALRI
        +++ +IE  L+       I+L+++DS+A++ R +F      +LK R+    + +  LK LA+++S+ V+LTNQ+            DL+  +D L +L  
Subjt:  DIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDF-GNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQV-----------VDLMGSSDGLNALRI

Query:  GNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVV
        G     C     V  ALG  W++ VN+RL L   +                    RR + +  +P  P +S  Y IK EG+V
Subjt:  GNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVV

O43542 DNA repair protein XRCC39.2e-3133.8Show/hide
Query:  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHS
        Q+ + GCP++D  + GG+    +TE+   S  GKTQL LQL L  Q P  +GGL A ++YI TE  FP +RLQQL     +  P+         ++ +  
Subjt:  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHS

Query:  AHQLF-DIMPKIEFFLQNRNSQLPI-------RLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALR
          Q+F + +  ++  L+  N ++P+       RL+VIDS+AA FR +F +  S  + R      +   L+ L+  +   V+  NQV + M      +   
Subjt:  AHQLF-DIMPKIEFFLQNRNSQLPI-------RLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALR

Query:  IGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVG
         G L F      RV PALG+ WAN +  RL   R  E            E       R L V+ APHLP SSC Y I  EGV G
Subjt:  IGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVG

Q08DH8 DNA repair protein XRCC33.2e-3133.68Show/hide
Query:  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSYPQFSNPSDHIFVEP
        Q+ + GCP++D  + GG+    +TE+   S  GKTQL LQL L  QLP  +GGL A ++Y+ TE  FP RRLQQL    Q   +  P       H+ +  
Subjt:  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSYPQFSNPSDHIFVEP

Query:  VHSAHQLF-DIMPKIEFFLQNRNSQLPI-------RLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLN
        +   HQ+F +    ++  LQ    ++P+       RL+VIDS+AA FR +F    + L  R+     +  +L+ L+  +   V+  NQV + +   D   
Subjt:  VHSAHQLF-DIMPKIEFFLQNRNSQLPI-------RLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLN

Query:  ALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGV
                 L +    + PALG+ WAN +  RL   R               E       R L VVFAPHLP SSC Y I  EGV G+
Subjt:  ALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGV

Q9CXE6 DNA repair protein XRCC32.3e-3435.54Show/hide
Query:  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSYPQ-------FSNPS
        Q+ + GCP++D+ +GGG+    +T +   S  GKTQL LQL L  Q P   GGL A ++YI TE  FP +RL QL    +   +  P+       FSN  
Subjt:  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSYPQ-------FSNPS

Query:  DHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNA
         HIF+E       L + + K    L +R      RL+V+DSIAA FR +F    S +  R+ L   +   L+ L+  +   V+  NQV D++     ++ 
Subjt:  DHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNA

Query:  LRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGV
              + L +S  R+ PALG+ WAN +  RL + R  E     D +  G   L R   R L V+FAPHLP SSC Y +  EG+ G+
Subjt:  LRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGV

Q9FKM5 DNA repair protein XRCC3 homolog6.0e-9960.94Show/hide
Query:  PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---
        PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P     
Subjt:  PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---

Query:  --SNPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGS
           NP DH+FV+ VHS   LFDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F NTPSDLK+RSSLFFKISGKLK LA K+ LA+V+TNQV DL+ +
Subjt:  --SNPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGS

Query:  SDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES
        SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+SR++   V    +   N S  + R  +R L +VF+P+LP SSCE++I REG+  V++
Subjt:  SDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES

Arabidopsis top hitse value%identityAlignment
AT2G45280.1 RAS associated with diabetes protein 51C1.4e-2127.33Show/hide
Query:  NLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS----
        ++L+  ++  + T  C  +D  +GGG++C  +TEI    G GKTQ+ +QLS+  Q+P   GGL   ++YI TE  F   R  Q+++A      +++    
Subjt:  NLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS----

Query:  ----------NPSD---HIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVL
                   P D   +IF   V S  +   ++  +E F+        ++++++DSI   FR D+     DL +R+ +  +++ K   LAKK+SLAVVL
Subjt:  ----------NPSD---HIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVL

Query:  TNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGV
         NQV      S+G   L +               ALG +W++   +R+ L              NG E       R+ ++  +P LP +S  Y +   G+
Subjt:  TNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGV

AT2G45280.2 RAS associated with diabetes protein 51C1.4e-2127.33Show/hide
Query:  NLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS----
        ++L+  ++  + T  C  +D  +GGG++C  +TEI    G GKTQ+ +QLS+  Q+P   GGL   ++YI TE  F   R  Q+++A      +++    
Subjt:  NLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS----

Query:  ----------NPSD---HIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVL
                   P D   +IF   V S  +   ++  +E F+        ++++++DSI   FR D+     DL +R+ +  +++ K   LAKK+SLAVVL
Subjt:  ----------NPSD---HIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVL

Query:  TNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGV
         NQV      S+G   L +               ALG +W++   +R+ L              NG E       R+ ++  +P LP +S  Y +   G+
Subjt:  TNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGV

AT5G20850.1 RAS associated with diabetes protein 512.3e-1627.68Show/hide
Query:  TFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQ
        T G   +D+ + GG+   S+TE+  E   GKTQLC  L +  QLP+  GG    ++YI  E  F  +RL Q++  F  +        +  +    ++ HQ
Subjt:  TFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQ

Query:  LFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSR
           ++      ++ R       L+++DS  AL+R+DF     +L  R     K    L+ LA ++ +AVV+TNQVV      DG +AL  G         
Subjt:  LFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSR

Query:  RRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGV
         +  P  G   A+   +RL L +                   R   R   V+ +P LP++   + I  EGV
Subjt:  RRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGV

AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3)4.3e-10060.94Show/hide
Query:  PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---
        PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P     
Subjt:  PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---

Query:  --SNPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGS
           NP DH+FV+ VHS   LFDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F NTPSDLK+RSSLFFKISGKLK LA K+ LA+V+TNQV DL+ +
Subjt:  --SNPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGS

Query:  SDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES
        SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+SR++   V    +   N S  + R  +R L +VF+P+LP SSCE++I REG+  V++
Subjt:  SDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES

AT5G57450.2 homolog of X-ray repair cross complementing 3 (XRCC3)4.3e-10060.94Show/hide
Query:  PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---
        PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P     
Subjt:  PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---

Query:  --SNPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGS
           NP DH+FV+ VHS   LFDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F NTPSDLK+RSSLFFKISGKLK LA K+ LA+V+TNQV DL+ +
Subjt:  --SNPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGS

Query:  SDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES
        SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+SR++   V    +   N S  + R  +R L +VF+P+LP SSCE++I REG+  V++
Subjt:  SDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCCGGAAAATCTCCTCAATCTCCTTCAAACCACCCAAAAGTGCACCTTCGGATGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCGCCTGCAGCTCC
CTCACTGAAATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCA
TCTCTCTACATCCACACCGAATTCCCTTTCCCCTTTCGACGCCTTCAACAACTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCAAACCCCTCCGATCAC
ATCTTTGTCGAACCCGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATTCTTCCTCCAAAATCGAAATTCCCAATTGCCCATCAGGCTTATT
GTGATTGATTCGATTGCGGCGTTGTTTCGCTCCGATTTCGGCAACACCCCATCTGATCTCAAGCGGAGATCTTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAG
TTGTTGGCTAAGAAGTATTCTTTGGCTGTGGTTTTGACGAATCAGGTGGTTGATCTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAG
TTCTTGTGTTCGTCGAGACGACGGGTTTGCCCGGCGCTGGGGCTGGCGTGGGCTAATTGTGTTAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGA
GAAGGTGATGGTATGATGAATGGTAGTGAATTACTACAACGAAGAACTAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTAT
GTAATCAAGAGAGAAGGAGTTGTGGGAGTTGAAAGCCAATGA
mRNA sequenceShow/hide mRNA sequence
GGGAACCCCAAAATTCAAATCCGTCAACTTTGGCGGTCGATCTTCAGTCGGCGTTTTGAGAACCAGAAATGACGCCGGAAAATCTCCTCAATCTCCTTCAAACCA
CCCAAAAGTGCACCTTCGGATGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCGCCTGCAGCTCCCTCACTGAAATCGTCGCCGAAAGCGGCTGCGGCAAAA
CCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAATTCCCTTTCCCCTTTC
GACGCCTTCAACAACTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCAAACCCCTCCGATCACATCTTTGTCGAACCCGTTCACTCTGCCCACCAACTGT
TCGACATAATGCCCAAGATAGAATTCTTCCTCCAAAATCGAAATTCCCAATTGCCCATCAGGCTTATTGTGATTGATTCGATTGCGGCGTTGTTTCGCTCCGATT
TCGGCAACACCCCATCTGATCTCAAGCGGAGATCTTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGTTGTTGGCTAAGAAGTATTCTTTGGCTGTGGTTTTGA
CGAATCAGGTGGTTGATCTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGAGACGACGGGTTTGCCCGGCGC
TGGGGCTGGCGTGGGCTAATTGTGTTAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGAGAAGGTGATGGTATGATGAATGGTAGTGAATTACTAC
AACGAAGAACTAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAAGAGAGAAGGAGTTGTGGGAGTTGAAAGCC
AATGACCTATTTCTTGTCAACTTATTAATTTTGTGGAGGGAGAACTAAAGTATGTATTATCTATGTTCTGGTTGTGTAAAGCGATGAATTATAGAAATTTAAGTT
TGTGTAACCAGCATTTTGATTTTTTT
Protein sequenceShow/hide protein sequence
MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDH
IFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLK
FLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ