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Clc11G13690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G13690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:24403432..24403809
RNA-Seq ExpressionClc11G13690
SyntenyClc11G13690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61102.1 hypothetical protein Csa_021323 [Cucumis sativus]1.6e-1868.89Show/hide
Query:  MSKQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        MSKQ+  + DGGYQNYDY S DYSYNQ +  EVQ T  Y     V ++NQ+SSYEQSWRTHDR+RQTG+ TT+STKAVASRGETFKER+T
Subjt:  MSKQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

TYK10872.1 uncharacterized protein E5676_scaffold231G00440 [Cucumis melo var. makuwa]7.1e-2273.63Show/hide
Query:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        MSKQ+ ++ DGGYQNYDYD S DYSYNQ    EVQ T  Y     VEDNNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKER+T
Subjt:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

XP_008452151.1 PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo]9.3e-2273.63Show/hide
Query:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        MSKQ+ ++ DGGYQNYDYD S DYSYNQ    EVQ T  Y     VEDNNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKER+T
Subjt:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

XP_022997473.1 uncharacterized protein LOC111492379 [Cucurbita maxima]5.7e-1963.64Show/hide
Query:  KQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        KQ+DQWG  GYQ+YDYD  DYSY+   +  VQ  R   V     ++ Q+SSYEQSWRTHDR+RQTG+YTTASTK VASRGETFKER++
Subjt:  KQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

XP_038889670.1 uncharacterized protein LOC120079530 [Benincasa hispida]9.6e-1977.03Show/hide
Query:  DSGDYSYNQSEEHEVQPTRHY--AVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        +SGD+SYNQS+ HEVQ T  Y   VS  VE+ NQLSSYEQSWRTHDR+RQTGTYTT STKAVASRGETFKER+T
Subjt:  DSGDYSYNQSEEHEVQPTRHY--AVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

TrEMBL top hitse value%identityAlignment
A0A0A0LK69 Uncharacterized protein8.0e-1968.89Show/hide
Query:  MSKQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        MSKQ+  + DGGYQNYDY S DYSYNQ +  EVQ T  Y     V ++NQ+SSYEQSWRTHDR+RQTG+ TT+STKAVASRGETFKER+T
Subjt:  MSKQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

A0A1S3BT44 uncharacterized protein LOC1034932524.5e-2273.63Show/hide
Query:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        MSKQ+ ++ DGGYQNYDYD S DYSYNQ    EVQ T  Y     VEDNNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKER+T
Subjt:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

A0A5A7VGP1 Uncharacterized protein4.5e-2273.63Show/hide
Query:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        MSKQ+ ++ DGGYQNYDYD S DYSYNQ    EVQ T  Y     VEDNNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKER+T
Subjt:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

A0A5D3CHW8 Uncharacterized protein3.5e-2273.63Show/hide
Query:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        MSKQ+ ++ DGGYQNYDYD S DYSYNQ    EVQ T  Y     VEDNNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKER+T
Subjt:  MSKQIDQWGDGGYQNYDYD-SGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

A0A6J1KE05 uncharacterized protein LOC1114923792.7e-1963.64Show/hide
Query:  KQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT
        KQ+DQWG  GYQ+YDYD  DYSY+   +  VQ  R   V     ++ Q+SSYEQSWRTHDR+RQTG+YTTASTK VASRGETFKER++
Subjt:  KQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGCAGATTGATCAATGGGGGGATGGTGGGTACCAGAATTATGACTACGATTCAGGCGACTATTCATACAATCAATCTGAAGAACATGAAGTTCAGCCA
ACCAGACATTATGCGGTTTCTGCTTATGTAGAGGACAACAACCAGCTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGTGATAGGCAAACTGGAACGTAT
ACAACTGCCTCAACAAAGGCGGTTGCTTCCCGTGGTGAAACGTTCAAAGAAAGAGCAACCGCGGGAGAGTTGGCGCCAAGGACGAGTTCAAAACCACGTCCACTT
ACAGGGTTGGAGACAAAAGTGGATATACTGAGTATCAGTGTCAAGAGAGGTTCCGCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGCAGATTGATCAATGGGGGGATGGTGGGTACCAGAATTATGACTACGATTCAGGCGACTATTCATACAATCAATCTGAAGAACATGAAGTTCAGCCA
ACCAGACATTATGCGGTTTCTGCTTATGTAGAGGACAACAACCAGCTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGTGATAGGCAAACTGGAACGTAT
ACAACTGCCTCAACAAAGGCGGTTGCTTCCCGTGGTGAAACGTTCAAAGAAAGAGCAACCGCGGGAGAGTTGGCGCCAAGGACGAGTTCAAAACCACGTCCACTT
ACAGGGTTGGAGACAAAAGTGGATATACTGAGTATCAGTGTCAAGAGAGGTTCCGCCGAGTAG
Protein sequenceShow/hide protein sequence
MSKQIDQWGDGGYQNYDYDSGDYSYNQSEEHEVQPTRHYAVSAYVEDNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERATAGELAPRTSSKPRPL
TGLETKVDILSISVKRGSAE