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Clc11G14250 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G14250
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal protein S4
Genome locationClcChr11:25147927..25149209
RNA-Seq ExpressionClc11G14250
SyntenyClc11G14250
Gene Ontology termsNA
InterPro domainsIPR022801 - Ribosomal protein S4/S9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020207843.1 LOW QUALITY PROTEIN: uncharacterized protein LOC109792813 [Cajanus cajan]9.7e-2396.72Show/hide
Query:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        PKREAQRMSDAKPRTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSH AVRGRYRSYS
Subjt:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
XP_020960293.1 LOW QUALITY PROTEIN: uncharacterized protein LOC110263417 [Arachis ipaensis]9.7e-2396.72Show/hide
Query:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        PKREAQRMSDAKPRTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSH AVRGRYRSYS
Subjt:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
XP_022156782.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023612, partial [Momordica charantia]1.8e-2496.83Show/hide
Query:  KPPKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        +PPKREAQRMSDAKPRTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
Subjt:  KPPKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
XP_027185400.1 LOW QUALITY PROTEIN: uncharacterized protein LOC113783458 [Coffea eugenioides]9.7e-2396.72Show/hide
Query:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        PKREAQRMSDAKPRTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSH AVRGRYRSYS
Subjt:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
XP_028802037.1 LOW QUALITY PROTEIN: uncharacterized protein LOC114757203 [Prosopis alba]9.7e-2396.72Show/hide
Query:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        PKREAQRMSDAKPRTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSH AVRGRYRSYS
Subjt:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
TrEMBL top hitse value%identityAlignment
A0A1P8B2W4 Uncharacterized protein2.6e-2193.44Show/hide
Query:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        PKREAQRMSDAK RTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSH  VRGRYRSYS
Subjt:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
A0A654GF96 Uncharacterized protein2.6e-2193.44Show/hide
Query:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        PKREAQRMSDAK RTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSH  VRGRYRSYS
Subjt:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
A0A6J1DSV8 LOW QUALITY PROTEIN: uncharacterized protein LOC1110236128.6e-2596.83Show/hide
Query:  KPPKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        +PPKREAQRMSDAKPRTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
Subjt:  KPPKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
A0A6P5MYJ2 LOW QUALITY PROTEIN: uncharacterized protein LOC1102773664.7e-2396.72Show/hide
Query:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        PKREAQRMSDAKPRTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSH AVRGRYRSYS
Subjt:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
A0A6P8BX63 LOW QUALITY PROTEIN: uncharacterized protein LOC1161900814.7e-2396.72Show/hide
Query:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
        PKREAQRMSDAKPRTSLRSYWHT PKKKEQTPLKTRVRYNKAISVHRPSH AVRGRYRSYS
Subjt:  PKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYS
SwissProt top hitse value%identityAlignment
Q31708 Ribosomal protein S4, mitochondrial8.3e-0976.92Show/hide
Query:  QSQTTRKLPLNHGDLPITEMHRGTERTSYIPFPLNPAAR
        Q QTTRKLP  +GDLPITEMHRGT+RTSYIPF LN   R
Subjt:  QSQTTRKLPLNHGDLPITEMHRGTERTSYIPFPLNPAAR
Arabidopsis top hitse value%identityAlignment
AT2G07734.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein2.0e-1387.18Show/hide
Query:  QSQTTRKLPLNHGDLPITEMHRGTERTSYIPFPLNPAAR
        Q QTTRKLPL HGDLPITEMHRGT+RTSYIPFPLNP  R
Subjt:  QSQTTRKLPLNHGDLPITEMHRGTERTSYIPFPLNPAAR
ATMG00290.1 mitochondrial ribosomal protein S42.0e-1387.18Show/hide
Query:  QSQTTRKLPLNHGDLPITEMHRGTERTSYIPFPLNPAAR
        Q QTTRKLPL HGDLPITEMHRGT+RTSYIPFPLNP  R
Subjt:  QSQTTRKLPLNHGDLPITEMHRGTERTSYIPFPLNPAAR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGAATGCGTGCTCGCTGCTTTTGAATCGTTAGCTGGAGACGAAAGCCCTTTTGTCCAGAAACCGAGCAAGCCCCCGAAGAGGGAAGCCCAACGAATGTCA
GATGCAAAGCCCCGCACCTCATTAAGATCATATTGGCATACTCCCCCAAAAAAAAAAGAGCAGACCCCATTGAAGACGAGAGTGAGGTACAACAAGGCCATTTCT
GTCCACCGCCCTTCTCACAGAGCCGTACGTGGACGTTACCGCTCATACAGCTTACCTTCCCTCTTCTTTCTTTGTGGCTTCTTCATCATGTTGTTCCATCCTTCA
GGGATGTTCGATCGAAAGAGTCGAAATGTCTCGAGAGGGCCGGTCACTCTTCGGGACGGAATGGAAGAAGGGAGGAGATTCTCGAACGAGGAAAAGGATCCAATG
ACTTCGAAAGAATTGAACGAGGAGCCGTATGAGGTGAAAATCTCACGTACGGTTCTGTCGAGTGGCAGCAAGGGGGAAGGAAGATCAGTCTTAAATAAAAGAAGA
CGTCGGACCACTCGAACCGCGCAAGGTCCTCGGAATGCTGTAAAACGCATCTTACGGTATCTGAAGGGTTCTCTTGGCCGTGGCCTAACCATCACTCCGGGTGGG
AAGAAAGTCATTGCTAGCTCTTTGACCGGTGCAGGAAAGGGAAGGAAAGGGCTTCGCCTGACTCGTTCTCCAGCCTCACTCGCGGCTCAGGAAAGACAAGAGTTC
CAATCACAAACTACACGAAAGTTGCCCCTAAATCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAAT
CCAGCTGCGCGAGCTAGAAGGATCTTTCGAGAAATACCTGATCGAGGGTTAGCGGATATGTTTTCATATTTCGTTGGAAATATTGCGATAGCGATAGAAATTTCA
TTTTACTCATCCTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGAATGCGTGCTCGCTGCTTTTGAATCGTTAGCTGGAGACGAAAGCCCTTTTGTCCAGAAACCGAGCAAGCCCCCGAAGAGGGAAGCCCAACGAATGTCA
GATGCAAAGCCCCGCACCTCATTAAGATCATATTGGCATACTCCCCCAAAAAAAAAAGAGCAGACCCCATTGAAGACGAGAGTGAGGTACAACAAGGCCATTTCT
GTCCACCGCCCTTCTCACAGAGCCGTACGTGGACGTTACCGCTCATACAGCTTACCTTCCCTCTTCTTTCTTTGTGGCTTCTTCATCATGTTGTTCCATCCTTCA
GGGATGTTCGATCGAAAGAGTCGAAATGTCTCGAGAGGGCCGGTCACTCTTCGGGACGGAATGGAAGAAGGGAGGAGATTCTCGAACGAGGAAAAGGATCCAATG
ACTTCGAAAGAATTGAACGAGGAGCCGTATGAGGTGAAAATCTCACGTACGGTTCTGTCGAGTGGCAGCAAGGGGGAAGGAAGATCAGTCTTAAATAAAAGAAGA
CGTCGGACCACTCGAACCGCGCAAGGTCCTCGGAATGCTGTAAAACGCATCTTACGGTATCTGAAGGGTTCTCTTGGCCGTGGCCTAACCATCACTCCGGGTGGG
AAGAAAGTCATTGCTAGCTCTTTGACCGGTGCAGGAAAGGGAAGGAAAGGGCTTCGCCTGACTCGTTCTCCAGCCTCACTCGCGGCTCAGGAAAGACAAGAGTTC
CAATCACAAACTACACGAAAGTTGCCCCTAAATCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAAT
CCAGCTGCGCGAGCTAGAAGGATCTTTCGAGAAATACCTGATCGAGGGTTAGCGGATATGTTTTCATATTTCGTTGGAAATATTGCGATAGCGATAGAAATTTCA
TTTTACTCATCCTCGTGA
Protein sequenceShow/hide protein sequence
MNECVLAAFESLAGDESPFVQKPSKPPKREAQRMSDAKPRTSLRSYWHTPPKKKEQTPLKTRVRYNKAISVHRPSHRAVRGRYRSYSLPSLFFLCGFFIMLFHPS
GMFDRKSRNVSRGPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGEGRSVLNKRRRRTTRTAQGPRNAVKRILRYLKGSLGRGLTITPGG
KKVIASSLTGAGKGRKGLRLTRSPASLAAQERQEFQSQTTRKLPLNHGDLPITEMHRGTERTSYIPFPLNPAARARRIFREIPDRGLADMFSYFVGNIAIAIEIS
FYSSS