| GenBank top hits | e value | %identity | Alignment |
| AHM89856.1 RNA polymerase beta subunit [Lagenaria siceraria] | 1.8e-63 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| QJR52948.1 RNA polymerase beta subunit [Herpetospermum pedunculosum] | 1.8e-63 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| YP_009752827.1 RNA polymerase subunit beta [Baijiania yunnanensis] | 1.8e-63 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| YP_009753166.1 RNA polymerase subunit beta [Trichosanthes truncata] | 1.8e-63 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| YP_009753697.1 RNA polymerase subunit beta [Trichosanthes nervifolia] | 1.8e-63 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| TrEMBL top hits | e value | %identity | Alignment |
| A0A1S4ETZ9 DNA-directed RNA polymerase subunit beta | 8.9e-64 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| A0A1X9Q1B9 DNA-directed RNA polymerase subunit beta | 8.9e-64 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| A0A218KG28 DNA-directed RNA polymerase subunit beta | 8.9e-64 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| A0A249RZI0 DNA-directed RNA polymerase subunit beta | 8.9e-64 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| A0A6H0ETN6 DNA-directed RNA polymerase subunit beta | 8.9e-64 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| SwissProt top hits | e value | %identity | Alignment |
| A4QJA7 DNA-directed RNA polymerase subunit beta | 2.9e-64 | 69.27 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQ+GRPVDM IFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT +PFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGR+KQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| A4QK10 DNA-directed RNA polymerase subunit beta | 2.9e-64 | 69.27 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQ+GRPVDM IFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT +PFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGR+KQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| P50546 DNA-directed RNA polymerase subunit beta | 2.9e-64 | 69.27 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQ+GRPVDM IFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT +PFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGR+KQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| Q0ZJ28 DNA-directed RNA polymerase subunit beta | 1.7e-64 | 69.79 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQ+GRPVDM IFEC G LLDRH+RI PFDEKYEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT +PFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| Q4VZP1 DNA-directed RNA polymerase subunit beta | 2.4e-66 | 71.35 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQNGRPVDM IFEC GSLLDRH+RIVPFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT NPFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGRAKQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
| AT1G29940.1 nuclear RNA polymerase A2 | 4.1e-05 | 33.33 | Show/hide |
Query: YLGKNRIFDGRTRNPFEQLVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEME
+ G ++ G + + +G Y +L H V DK RS+ +T QP++GR + GG R GEME
Subjt: YLGKNRIFDGRTRNPFEQLVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEME
|
|
| AT4G21710.1 DNA-directed RNA polymerase family protein | 1.5e-10 | 41.79 | Show/hide |
Query: GKNRIFDGRTRNPFEQLVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEME
G R+++G T P ++ +G Y +L H VDDKIH R ++T+QP GR++ GG R GEME
Subjt: GKNRIFDGRTRNPFEQLVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEME
|
|
| AT5G45140.1 nuclear RNA polymerase C2 | 4.3e-10 | 39.47 | Show/hide |
Query: YLGKNRIFDGRTRNPFEQLVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF
Y GK+ ++ G + P E + +G Y KL H V DK+H R S ++T+QP G++K GG R+GEME L+ +
Subjt: YLGKNRIFDGRTRNPFEQLVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF
|
|
| ATCG00190.1 RNA polymerase subunit beta | 2.1e-65 | 69.27 | Show/hide |
Query: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
M YLQ+GRPVDM IFEC GSLLDRH+RI PFDE+YEQEASRKLVFSELYEA+KQ PWVFEPEY GK+RIFDGRT +PFEQ
Subjt: MSYLQNGRPVDM---------------IFEC-----GSLLDRHHRIVPFDEKYEQEASRKLVFSELYEANKQIVIPWVFEPEYLGKNRIFDGRTRNPFEQ
Query: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
VIIGKPYILKLIHQVDDKIH RSS HYALVTQQPLRGR+KQGGQR+GEME L F + L DHIR QEVLGT IIGGTIP
Subjt: LVIIGKPYILKLIHQVDDKIHRRSSEHYALVTQQPLRGRAKQGGQRMGEMEDLVLLIF-----YKRCLLINFDHIRTWQEVLGTIIIGGTIP
|
|