; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G14830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G14830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationClcChr11:25663542..25666827
RNA-Seq ExpressionClc11G14830
SyntenyClc11G14830
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135326.1 chlorophyll a-b binding protein 7, chloroplastic [Cucumis sativus]5.1e-15096.68Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTSA--AAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES
        MASACASSAIAAVAISSSSS KNGCPK ASNFLTGKKLRLRNL +A  A VAPR+ PVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES
Subjt:  MASACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTSA--AAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES

Query:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG
        LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG
Subjt:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG

Query:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

XP_008446036.1 PREDICTED: chlorophyll a-b binding protein 7, chloroplastic [Cucumis melo]2.7e-15197.4Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLR
        MASACASSAIAAVAISSSSS KNGCPK ASNFL GKKLRLRNL +AA VAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLR
Subjt:  MASACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLR

Query:  WNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLW
        WNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLW
Subjt:  WNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLW

Query:  FDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        FDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  FDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

XP_022957420.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]2.1e-15197.76Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW
        MASACASSAIAAVAISSSSSQKNGCPK SNFLTGK+LRLR  T AAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRW
Subjt:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW

Query:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
        NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
Subjt:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF

Query:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

XP_023541134.1 chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita pepo subsp. pepo]2.3e-15096.64Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW
        MASACASSAIA VAISSSSSQKNGCPKASNF+TGKKLRLR  T+ AAVAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRW
Subjt:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW

Query:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
        NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
Subjt:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF

Query:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

XP_038892923.1 chlorophyll a-b binding protein 7, chloroplastic [Benincasa hispida]4.9e-15398.13Show/hide
Query:  ASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN
        +SACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLT+A AVAPRS PVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN
Subjt:  ASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN

Query:  QQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFD
        QQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFD
Subjt:  QQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFD

Query:  PLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        PLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  PLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

TrEMBL top hitse value%identityAlignment
A0A0A0KV98 Chlorophyll a-b binding protein, chloroplastic2.5e-15096.68Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTSA--AAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES
        MASACASSAIAAVAISSSSS KNGCPK ASNFLTGKKLRLRNL +A  A VAPR+ PVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES
Subjt:  MASACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTSA--AAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES

Query:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG
        LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG
Subjt:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG

Query:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

A0A1S3BDM5 Chlorophyll a-b binding protein, chloroplastic1.3e-15197.4Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLR
        MASACASSAIAAVAISSSSS KNGCPK ASNFL GKKLRLRNL +AA VAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLR
Subjt:  MASACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLR

Query:  WNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLW
        WNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLW
Subjt:  WNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLW

Query:  FDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        FDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  FDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

A0A6J1H0H5 Chlorophyll a-b binding protein, chloroplastic1.0e-15197.76Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW
        MASACASSAIAAVAISSSSSQKNGCPK SNFLTGK+LRLR  T AAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRW
Subjt:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW

Query:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
        NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
Subjt:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF

Query:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

A0A6J1HNZ1 Chlorophyll a-b binding protein, chloroplastic3.2e-15096.27Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW
        MASACASSAIA VAISSSSSQKNGCPKASNF+TGKKLRLR  T+  AVAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRW
Subjt:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW

Query:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
        NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
Subjt:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF

Query:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

A0A6J1KAB5 Chlorophyll a-b binding protein, chloroplastic1.0e-15197.76Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW
        MASACASSAIAAVAISSSSSQKNGCPK SNFLTGK+LRLR  T AAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRW
Subjt:  MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW

Query:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
        NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
Subjt:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF

Query:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic6.3e-13585.24Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGC---PKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES
        MASACASS IAAVA SS SS++NG       ++FL G++LR+    S    A  +  VC AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES
Subjt:  MASACASSAIAAVAISSSSSQKNGC---PKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES

Query:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG
        LRWNQQAELVHCRWAMLGAAGIFIPE LTKIGILNTPSWYTAGE EYFTDTTTLFIVEL+ IGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYPGG
Subjt:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG

Query:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        LWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Subjt:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

P13869 Chlorophyll a-b binding protein, chloroplastic6.5e-13284.98Show/hide
Query:  MASACASSAIAAVAISSSSSQKN----GCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCA-AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDP
        MASACASS IAAVA SS SSQKN    G  KAS FL GK+LR+      A V  RS  V A AADPDRPLWFPGSTPP WLDGSLPGDFGFDPLGL SDP
Subjt:  MASACASSAIAAVAISSSSSQKN----GCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCA-AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDP

Query:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
        ESL+WN QAELVH RWAMLGAAGIFIPEFLTKIG+LNTPSWYTAGE EYFTDTTTLF++EL+ IGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYP
Subjt:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP

Query:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        GGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Subjt:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

P27521 Chlorophyll a-b binding protein 4, chloroplastic1.5e-5946.48Show/hide
Query:  IAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHC
        +A V   +S+S    C     FLTG   RL    S  ++   +       +  +  W PG   P +L GSL GD GFDPLGLA DPE+L+W  QAELV+ 
Subjt:  IAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHC

Query:  RWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGS
        RWAMLG AG+ +PE  TKIGI+N P WY AG+ +YF  ++TLF++E I   + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +    
Subjt:  RWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGS

Query:  PEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF
            +E + KE+ NGRLAMLA +G   QH  TG GP +NL  HL+DP H T+   F
Subjt:  PEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic9.5e-8356.13Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPK---ASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES
        MA A AS+  + + +S+S  Q     +   AS   TG +L    L    A     + VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++
Subjt:  MASACASSAIAAVAISSSSSQKNGCPK---ASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES

Query:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG
        L+W  QAEL+H RWAML   GI IPE L ++G +   SWY AG  EYF D+TTLF+ +++ +GWAEGRRWAD++KPG V+ +P +P+      DVGYPGG
Subjt:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG

Query:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT
        LWFD + WG GSPE +  LRTKEIKNGRLAMLA +G  FQ  YT   PI+NL AHLADPGH  VF+AFT
Subjt:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic4.1e-12680.6Show/hide
Query:  ASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCA-AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW
        +S CASSAIAA++             + +FL GKKLRL+   +  AV+   A V A AADPDRP+WFPGSTPP WLDGSLPGDFGFDPLGL+SDP+SL+W
Subjt:  ASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCA-AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW

Query:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
        N QAE+VHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGE EYFTD TTLF+VELI IGWAEGRRWADI+KPG VNTDP+FPNNKLTGTDVGYPGGLWF
Subjt:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF

Query:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        DPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Subjt:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 66.7e-8456.13Show/hide
Query:  MASACASSAIAAVAISSSSSQKNGCPK---ASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES
        MA A AS+  + + +S+S  Q     +   AS   TG +L    L    A     + VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++
Subjt:  MASACASSAIAAVAISSSSSQKNGCPK---ASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPES

Query:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG
        L+W  QAEL+H RWAML   GI IPE L ++G +   SWY AG  EYF D+TTLF+ +++ +GWAEGRRWAD++KPG V+ +P +P+      DVGYPGG
Subjt:  LRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGG

Query:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT
        LWFD + WG GSPE +  LRTKEIKNGRLAMLA +G  FQ  YT   PI+NL AHLADPGH  VF+AFT
Subjt:  LWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT

AT1G45474.1 photosystem I light harvesting complex gene 52.6e-5145.58Show/hide
Query:  RNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTA
        R ++S  A      P  A    +R  W PG  PPP+LDG+L GD+GFDPLGL  DPESL+W  QAELVH R+AMLG AGI   + L   GI N P WY A
Subjt:  RNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTA

Query:  GELEY-FTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAW
        G +++ F  T TL +V+ + +G+AE +R+ D + PG    +  F       L G + GYPGG   +PLG      +   + + KEIKNGRLAM+A++G +
Subjt:  GELEY-FTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAW

Query:  FQHIYTGTGPIDNLFAHLADPGHATV
         Q   T TGPIDNL  HL++P H T+
Subjt:  FQHIYTGTGPIDNLFAHLADPGHATV

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.0e-6046.48Show/hide
Query:  IAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHC
        +A V   +S+S    C     FLTG   RL    S  ++   +       +  +  W PG   P +L GSL GD GFDPLGLA DPE+L+W  QAELV+ 
Subjt:  IAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHC

Query:  RWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGS
        RWAMLG AG+ +PE  TKIGI+N P WY AG+ +YF  ++TLF++E I   + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +    
Subjt:  RWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGS

Query:  PEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF
            +E + KE+ NGRLAMLA +G   QH  TG GP +NL  HL+DP H T+   F
Subjt:  PEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF

AT3G61470.1 photosystem I light harvesting complex gene 22.9e-12780.6Show/hide
Query:  ASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCA-AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW
        +S CASSAIAA++             + +FL GKKLRL+   +  AV+   A V A AADPDRP+WFPGSTPP WLDGSLPGDFGFDPLGL+SDP+SL+W
Subjt:  ASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCA-AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRW

Query:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF
        N QAE+VHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGE EYFTD TTLF+VELI IGWAEGRRWADI+KPG VNTDP+FPNNKLTGTDVGYPGGLWF
Subjt:  NQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWF

Query:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        DPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Subjt:  DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

AT5G28450.1 Chlorophyll A-B binding family protein7.8e-5692.23Show/hide
Query:  RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF
        R  DI+KPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAF
Subjt:  RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF

Query:  TPK
        TPK
Subjt:  TPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCGGCTGTGGCAATCTCTTCATCCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTCTAATTTCCTTACCGGCAAGAAGCT
GAGGCTGAGAAACTTAACTTCCGCGGCTGCTGTTGCTCCTCGATCAGCTCCGGTATGCGCCGCAGCTGACCCCGACAGACCTCTCTGGTTCCCTGGCAGCACCCCTCCTC
CATGGCTCGACGGCAGCCTTCCCGGCGACTTTGGCTTTGACCCACTTGGTCTTGCGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAGGCGGAGCTGGTACACTGCCGA
TGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTTTTGACAAAGATCGGAATATTGAACACTCCGTCATGGTACACCGCCGGTGAATTGGAATACTTCACCGA
CACCACCACTCTGTTCATAGTGGAACTCATTTTCATTGGTTGGGCCGAAGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTA
ACAACAAGCTCACCGGAACCGACGTCGGATACCCGGGTGGGCTTTGGTTCGACCCGCTCGGGTGGGGAAGCGGATCACCCGAAAAGATCAAGGAATTGAGAACGAAAGAG
ATAAAGAACGGGCGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTCTTCGCTCACCTTGCCGATCCCGG
CCACGCCACCGTCTTCGCCGCTTTCACACCAAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAGGGAATGAGTTGAAGGAGCCATAGAGAGAGTGCCAGGTGGCTTGAAATCTGAATGTAGATGCCGATTGGACTGGATATTTAAGGATATGATTGACACGCGCTTTAAAG
GAGAGCCACATGTTGAGATTATTCCAGGTAAGCATAATGAGGTGGCAGATATCAGATTCTCTAGTGAACGTGGCAGTGAATCAGCCAATTACATATTCCCTGTTCTATCC
ATTGAGATAAGGCCATGCATACATTAACAAAGTGAGAGATTGAAATTCAAACAATCCACAAGACCATCTCCGTCACTCGAATTTCCCCATTTTTAGAAAAATTAATCTCA
TCCAAAATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCGGCTGTGGCAATCTCTTCATCCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTCTAATTTCCTTACCGGCAA
GAAGCTGAGGCTGAGAAACTTAACTTCCGCGGCTGCTGTTGCTCCTCGATCAGCTCCGGTATGCGCCGCAGCTGACCCCGACAGACCTCTCTGGTTCCCTGGCAGCACCC
CTCCTCCATGGCTCGACGGCAGCCTTCCCGGCGACTTTGGCTTTGACCCACTTGGTCTTGCGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAGGCGGAGCTGGTACAC
TGCCGATGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTTTTGACAAAGATCGGAATATTGAACACTCCGTCATGGTACACCGCCGGTGAATTGGAATACTT
CACCGACACCACCACTCTGTTCATAGTGGAACTCATTTTCATTGGTTGGGCCGAAGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTT
TCCCTAACAACAAGCTCACCGGAACCGACGTCGGATACCCGGGTGGGCTTTGGTTCGACCCGCTCGGGTGGGGAAGCGGATCACCCGAAAAGATCAAGGAATTGAGAACG
AAAGAGATAAAGAACGGGCGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTCTTCGCTCACCTTGCCGA
TCCCGGCCACGCCACCGTCTTCGCCGCTTTCACACCAAAGTGAAGAAATTGAGGAGCATATAGGAGATGTAGTGCTGTGTTTGTGACTCAGGAAAAAATTATGTATTAAA
TCACAACTTCGCTCAAATCTTTGTGTTTATGTTGTCTGTGTATGATGGACATCATTATCAATTTAATGTACAAAATGAGATCACCAAATTAAGGAAGTTTAATTTAGACC
CACTTTGACTTCTATAAACCAATTTTAAGAACAACTCGGGAAGGATAGACTCACTAATGATGGTTATATCAAGTGGACATAAATATATCTACAATGAGGAGAGTGCAGCT
AATAGACTATAGTGGAATGTCTCGATAATTAACGAATGTTAATTAATTAGATTAAAGAGTTTAGTCGGTTAATTCCGGATCGTTGAAGCTCGTGATCTATAGGTCTATTA
GATTCCTTTGTTAGCTCATATGCTAATCTTTAGAACAGTGTGATGAAAAAATTTGAAAATGTTCAAATTTGTCTAAGAAGTAAGTTTTATGGATTGTTCGTTTTAATTAT
GAATTAAACGAAAATGGTGAATTGAAAATATTCAAATGTAATTTAAATATTAATTACATGAATAAAGATTCATCGAACTTGAAATTGTCGAGACAAGTAAAAAAGTTATT
AATTTAATAGAATTAATTAAATTATTTAATTA
Protein sequenceShow/hide protein sequence
MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCR
WAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKE
IKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK