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Clc11G14907 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G14907
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF4219 domain-containing protein
Genome locationClcChr11:25776793..25777220
RNA-Seq ExpressionClc11G14907
SyntenyClc11G14907
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR025314 - Domain of unknown function DUF4219


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD33270.1 TPA_asm: hypothetical protein HUJ06_012121 [Nelumbo nucifera]2.0e-3065.35Show/hide
Query:  MNDG---NNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERN
        MN G   +NIC DKL G+NYSYW+LCMEA+LQGQ+LW+L+  D+ +IP D  +  E +RKWK+KCGK LFALRTS SKEYIEHV D K PK++WETLER 
Subjt:  MNDG---NNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERN

Query:  F
        F
Subjt:  F

DAD45748.1 TPA_asm: hypothetical protein HUJ06_003978 [Nelumbo nucifera]3.1e-3166.33Show/hide
Query:  MNDG---NNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLE
        MN G   +NIC DKL G+NYSYW+LCMEA+LQGQ+LW+L+  D+ +IP D  +N E ++KWK+KCGK LFALRT ISKEYIEHVHD K PK++WETLE
Subjt:  MNDG---NNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLE

KAA8538840.1 hypothetical protein F0562_025532 [Nyssa sinensis]9.6e-3368.75Show/hide
Query:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLER
        MN G+++ ADKL  +NYSYW+LCMEA+LQGQ+LW+L+  DD +IPEDT +N E +RKWK+KCGK LFALRTSIS+EYIEH+ D K PK+VWETLER
Subjt:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLER

KAA8540328.1 hypothetical protein F0562_024753 [Nyssa sinensis]5.1e-3469.39Show/hide
Query:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF
        MN G+++  DKL G+NYSYW+LCMEA+LQGQ+LW+L+ GDD +IPEDT +N E +RKWK+KCGK LFALRTSIS+EYI+HV D K PK+VWETLER F
Subjt:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF

KAA8549541.1 hypothetical protein F0562_001441 [Nyssa sinensis]1.3e-3470.41Show/hide
Query:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF
        MN G+++  DKL G+NYSYW+LCMEA+LQGQ+LW+L+ GDD +IPEDT KN E +RKWK+KCGK LFALRTSIS+EYI+HV D K PK+VWETLER F
Subjt:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF

TrEMBL top hitse value%identityAlignment
A0A443N8T5 Integrase, catalytic core1.6e-3063.27Show/hide
Query:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF
        MN G+N+  DKL G+NY+YW+LCMEA+LQGQ+LW+L+ GD+ +IPEDT +N +  RKWK+KCGK LFALRTSIS++YI  V D   PK+VWE LER F
Subjt:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF

A0A5J5B8Q2 DUF4219 domain-containing protein4.6e-3368.75Show/hide
Query:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLER
        MN G+++ ADKL  +NYSYW+LCMEA+LQGQ+LW+L+  DD +IPEDT +N E +RKWK+KCGK LFALRTSIS+EYIEH+ D K PK+VWETLER
Subjt:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLER

A0A5J5BCB3 Uncharacterized protein2.5e-3469.39Show/hide
Query:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF
        MN G+++  DKL G+NYSYW+LCMEA+LQGQ+LW+L+ GDD +IPEDT +N E +RKWK+KCGK LFALRTSIS+EYI+HV D K PK+VWETLER F
Subjt:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF

A0A5J5C3K7 Uncharacterized protein3.7e-3066.33Show/hide
Query:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF
        MN G+++  DKL G+NYSY +LCMEA+LQGQ LW+L+ GDD +I EDT +NVE +RKWK+K GK LFALRTSIS+EYI+HV D K PK+VW+TLER F
Subjt:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF

A0A5J5C7C2 DUF4219 domain-containing protein6.5e-3570.41Show/hide
Query:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF
        MN G+++  DKL G+NYSYW+LCMEA+LQGQ+LW+L+ GDD +IPEDT KN E +RKWK+KCGK LFALRTSIS+EYI+HV D K PK+VWETLER F
Subjt:  MNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDD-LIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGAACGATGGAAACAACATTTGTGCAGACAAGCTTACCGGTGATAATTATAGTTATTGGAGGTTATGTATGGAAGCTTTTCTTCAAGGACAAGAGTTGTGGAA
TCTTGTTTTCGGTGATGATTTAATTCCAGAAGATACTCTGAAGAATGTTGAGGCACAGAGAAAGTGGAAGCTCAAGTGTGGCAAGACTTTATTTGCTTTGCGAACTTCTA
TTAGTAAAGAGTATATCGAGCATGTTCACGATAAAAAGCCTCCAAAGAAAGTGTGGGAGACACTTGAAAGAAATTTCAAAATTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATGAACGATGGAAACAACATTTGTGCAGACAAGCTTACCGGTGATAATTATAGTTATTGGAGGTTATGTATGGAAGCTTTTCTTCAAGGACAAGAGTTGTGGAA
TCTTGTTTTCGGTGATGATTTAATTCCAGAAGATACTCTGAAGAATGTTGAGGCACAGAGAAAGTGGAAGCTCAAGTGTGGCAAGACTTTATTTGCTTTGCGAACTTCTA
TTAGTAAAGAGTATATCGAGCATGTTCACGATAAAAAGCCTCCAAAGAAAGTGTGGGAGACACTTGAAAGAAATTTCAAAATTGGATAA
Protein sequenceShow/hide protein sequence
MQMNDGNNICADKLTGDNYSYWRLCMEAFLQGQELWNLVFGDDLIPEDTLKNVEAQRKWKLKCGKTLFALRTSISKEYIEHVHDKKPPKKVWETLERNFKIG