; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G15440 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G15440
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionpre-rRNA-processing protein TSR2
Genome locationClcChr11:26316838..26326974
RNA-Seq ExpressionClc11G15440
SyntenyClc11G15440
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR019398 - Pre-rRNA-processing protein TSR2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591676.1 Pre-rRNA-processing protein TSR2-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.4e-11371.11Show/hide
Query:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRILSAATTTTSSRKTSDSLSSSSSSSYYSSASSSSSCSSPN-LYNYNTDRRRAGFVF--
        MANFH+SKSDYD RR   CKRHP H QSPGVCSLCL EKLS+I+S    T SSRK SDSLSSS S+SYYSSASS SSCSSPN  Y YNTDRR+A FVF  
Subjt:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRILSAATTTTSSRKTSDSLSSSSSSSYYSSASSSSSCSSPN-LYNYNTDRRRAGFVF--

Query:  ---FKKSKSMAAIAPRLRGRTESESGK-KRLASSSL----SISLTVLSCFKGFTLGGEEMEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGG
           FKKS+SM A APRLR  TES+SGK   L S S+         + +  +   L  E  +   NRLLPA A PLFQEGIGLVLSRWSALQLAVENEWGG
Subjt:  ---FKKSKSMAAIAPRLRGRTESESGK-KRLASSSL----SISLTVLSCFKGFTLGGEEMEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGG

Query:  RDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDE
        RDSRRKVELLCSDI TWFTQ+KEPLYIDDLEMILDEA+LSLNTQVDDGSIEEVAERLIVMHEECLD NFSSIE+LRQ+P P+VA SHVSQ +SDDDE+++
Subjt:  RDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDE

Query:  EDGSGDVGNGRDVM----RNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN
        E+   D   G DV+    R DMMVDA Q   VNQ   EATAEAEDGWVQVTSRRSRGTRN
Subjt:  EDGSGDVGNGRDVM----RNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN

KAG6608259.1 Pre-rRNA-processing protein TSR2-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.3e-8575.31Show/hide
Query:  SESGKKRLAS-SSLSISLTVLSCFKGFTLGGEEMEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLY
        SES +  L    S SIS T ++  +GFTL G EM+GGGNRLLPADAFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIFTWFTQ+KE LY
Subjt:  SESGKKRLAS-SSLSISLTVLSCFKGFTLGGEEMEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLY

Query:  IDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFSSIERLRQTPHPQ-VAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDA---
        IDDLEMILDE MLSLNTQVDDGSIEEVAE+LI MHEEC+D NFSSIERLRQ+P P+  AHSHVSQA+SDD+E++E+D   D GNG D MRNDMMVDA   
Subjt:  IDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFSSIERLRQTPHPQ-VAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDA---

Query:  ---EQPRSVNQ-LNLEATAEAEDGWVQVTSRR-SRGTRN
           +QPR+VNQ    EA++ AEDGWVQVTSRR SRGTRN
Subjt:  ---EQPRSVNQ-LNLEATAEAEDGWVQVTSRR-SRGTRN

XP_016903483.1 PREDICTED: pre-rRNA-processing protein TSR2 [Cucumis melo]1.5e-8283.58Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWF Q+KE LYIDDLE ILDEAMLSLNTQVDDGSIEEVAERLI 
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQP---RSVN-QLNLEATAEAEDGWVQVTSRRSRGTR
        MHEEC+DRNFSSIERLRQ+P PQVAH+HV+QA SDDD+DD+ +         DV RNDMMVDA QP   R VN QLN EATAEAEDGWVQVTSRR+RGTR
Subjt:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQP---RSVN-QLNLEATAEAEDGWVQVTSRRSRGTR

Query:  N
        N
Subjt:  N

XP_022975934.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita maxima]5.8e-8284.34Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV
        MEGG NRLLPA A P FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI TWFTQ+KEPLYIDDLEMILDEA+LSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSG-DVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN
        MHEECLD NFSSIE+LRQ+P P+VA SHVSQ +SDD+E+DEE+G   DVGNG    R DMMVDA QPR VNQ   EATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSG-DVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN

XP_023534881.1 pre-rRNA-processing protein TSR2 homolog isoform X1 [Cucurbita pepo subsp. pepo]5.3e-8384.42Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV
        MEGG NRLLPA A PLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI TWFTQ+KEPLYIDDLEMILDEA+LSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGD--VGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN
        MHEECLD NFSSIE+LRQ+P PQVA SHVSQ +SDDDE+++E+  GD  VGNG    R DMMVDA QPR VNQ   EATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGD--VGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN

TrEMBL top hitse value%identityAlignment
A0A1S4E5H6 pre-rRNA-processing protein TSR27.4e-8383.58Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWF Q+KE LYIDDLE ILDEAMLSLNTQVDDGSIEEVAERLI 
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQP---RSVN-QLNLEATAEAEDGWVQVTSRRSRGTR
        MHEEC+DRNFSSIERLRQ+P PQVAH+HV+QA SDDD+DD+ +         DV RNDMMVDA QP   R VN QLN EATAEAEDGWVQVTSRR+RGTR
Subjt:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQP---RSVN-QLNLEATAEAEDGWVQVTSRRSRGTR

Query:  N
        N
Subjt:  N

A0A5D3E598 Pre-rRNA-processing protein TSR27.4e-8383.58Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWF Q+KE LYIDDLE ILDEAMLSLNTQVDDGSIEEVAERLI 
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQP---RSVN-QLNLEATAEAEDGWVQVTSRRSRGTR
        MHEEC+DRNFSSIERLRQ+P PQVAH+HV+QA SDDD+DD+ +         DV RNDMMVDA QP   R VN QLN EATAEAEDGWVQVTSRR+RGTR
Subjt:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQP---RSVN-QLNLEATAEAEDGWVQVTSRRSRGTR

Query:  N
        N
Subjt:  N

A0A6J1F8A7 pre-rRNA-processing protein TSR2 homolog6.3e-8283.42Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV
        MEGG NRLLPA A PLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI TWFTQ+KEPLYIDDLEMILDEA+LSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGD--VGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN
        MHEECLD NFSSIE+LRQ+P P+VA SHVSQ +SDDDE+++E+  GD  VGNG    R DMMVDA QP  VNQ   EATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGD--VGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN

A0A6J1IM14 pre-rRNA-processing protein TSR2 homolog2.8e-8284.34Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV
        MEGG NRLLPA A P FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI TWFTQ+KEPLYIDDLEMILDEA+LSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSG-DVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN
        MHEECLD NFSSIE+LRQ+P P+VA SHVSQ +SDD+E+DEE+G   DVGNG    R DMMVDA QPR VNQ   EATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSG-DVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN

A0A6J1J400 pre-rRNA-processing protein TSR2 homolog1.1e-8182.35Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIFTWFTQ+KE LYIDDLEMILDE MLSLNTQVDDGSIEEVAE+LI 
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEE---DGSGDVGNGRDVMRNDMMVDA--EQPRSVNQL-NLEATAEAEDGWVQVTSRR-SR
        MHEEC+D NFSSI RLRQ+P P+ AHSHVSQA+SD++E++EE   D  GDVGNG D MRNDMMVDA  +QPR+VNQ    EA+A AEDGWVQVTSRR SR
Subjt:  MHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEE---DGSGDVGNGRDVMRNDMMVDA--EQPRSVNQL-NLEATAEAEDGWVQVTSRR-SR

Query:  GTRN
        GTRN
Subjt:  GTRN

SwissProt top hitse value%identityAlignment
Q06672 Pre-rRNA-processing protein TSR21.2e-0830.23Show/hide
Query:  FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFSSIERL
        F+ G+ +V+ +W AL +AVEN WGG DS  K + +   +   F   K        E +L   +    T V+D S   +A  +I ++ +C + N++ +E+L
Subjt:  FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFSSIERL

Query:  R---QTPHPQVAHSHVSQAVSDDDEDDEE
            Q          V     DDDEDDE+
Subjt:  R---QTPHPQVAHSHVSQAVSDDDEDDEE

Q3KPN2 Pre-rRNA-processing protein TSR2 homolog1.2e-0525.95Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFS
        D+  LF+E    VL  W  LQ+AVEN +GG  S+ K E +   I  +F+ + +    +  + I+       +T V+DGS   VA++L V+  +C     +
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFS

Query:  SIE-RLRQTPHPQV-AHSHVSQAVSDDDED---DEEDGSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRR
        +++ ++ Q    +    + V +    DDE+   D+E+ + D  N         +  A  P S  +   E     +DGW  V  ++
Subjt:  SIE-RLRQTPHPQV-AHSHVSQAVSDDDED---DEEDGSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRR

Q3KRG3 Pre-rRNA-processing protein TSR2 homolog1.8e-0928.57Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLS-LNTQVDDGSIEEVAERLIVMHEECLDRNFSSI-
        +F E +  VL  W  LQ+AV+N +GG  S++K E +   +  +FT + + L  D++E  + E M +  +T VDDGS+ +VA+++  M ++C     + + 
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLS-LNTQVDDGSIEEVAERLIVMHEECLDRNFSSI-

Query:  ERLRQTPHPQV----AHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRR
        E++ +    +     A +  +Q   DDD+DDEE+     G             +    +VN L+ E   E +DGW  V  ++
Subjt:  ERLRQTPHPQV----AHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRR

Q3T090 Pre-rRNA-processing protein TSR2 homolog1.4e-0625.41Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLS-LNTQVDDGSIEEVAERLIVMHEECLDRNF
        D+  LF   +   L  W ALQ+AVEN +GG  S+ K E L   +  +F ++ + L +D++E  L E M++  +T V+DGS+ +V+++L  M       + 
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLS-LNTQVDDGSIEEVAERLIVMHEECLDRNF

Query:  SSIERLRQ--TPHPQVAHSHVSQAVSDDDEDDEEDG--SGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRR
        ++++ +    T       +       + DEDD+ +     +V    D    D +    +P   +   ++     EDGW  V  ++
Subjt:  SSIERLRQ--TPHPQVAHSHVSQAVSDDDEDDEEDG--SGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRR

Q969E8 Pre-rRNA-processing protein TSR2 homolog1.4e-0626.34Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLS-LNTQVDDGSIEEVAERLIVMHEECLDRNF
        DA  LF+ G+   L  W ALQ+AVEN +GG  S+ K + L   +  +F ++ + L +D++E  L E + +  +T V+DGS+ +V+++L  M       + 
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEAMLS-LNTQVDDGSIEEVAERLIVMHEECLDRNF

Query:  SSIER----LRQTPHPQVAHSHVSQAVSDDDEDDEED-GSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRR
        +++      + Q      A +  +   +D+DEDD +     +V    D    D +    +P   +   ++     EDGW  V  ++
Subjt:  SSIER----LRQTPHPQVAHSHVSQAVSDDDEDDEED-GSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRR

Arabidopsis top hitse value%identityAlignment
AT1G22470.1 unknown protein1.5e-0642.16Show/hide
Query:  NFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRI------LSAATTTTSSRKTSDSLSSSSS-----------SSYYSSASSSSSCSSPNLYN
        N    +SD     N+ CK+HP HRQSPG+CSLCL E LS++       S++ +++S  KT  S SS+SS           SSYYSS    SSC SP  + 
Subjt:  NFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRI------LSAATTTTSSRKTSDSLSSSSS-----------SSYYSSASSSSSCSSPNLYN

Query:  YN
        Y+
Subjt:  YN

AT1G35210.1 unknown protein4.3e-0647.19Show/hide
Query:  HKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRILSAATTTTSSRKTSDSLSSSSSSSYYSSASSS-SSCSSPNLYNYNTDRRR
        +K+K++   +    CK+HP HRQSPGVCSLCL E+LS  + AA++     +   S SSS++SS  S  SSS SSC SP +     DRRR
Subjt:  HKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRILSAATTTTSSRKTSDSLSSSSSSSYYSSASSS-SSCSSPNLYNYNTDRRR

AT1G72240.1 unknown protein4.5e-0845.63Show/hide
Query:  KSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRI--------LSAATTTTSSRKTSDSLSSSSSSSYYSSASSSSSCSSPNLYNY---NTDRRRAG
        +S S+ +   N  CK+H  HRQSPG+CSLCLTE+LS++          A  T T    TS S SSS SS Y  S+SS SSCSSP  Y Y     D ++  
Subjt:  KSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRI--------LSAATTTTSSRKTSDSLSSSSSSSYYSSASSSSSCSSPNLYNY---NTDRRRAG

Query:  FVF
        F+F
Subjt:  FVF

AT3G22510.1 Pre-rRNA-processing protein TSR2, conserved region2.8e-1845.92Show/hide
Query:  PADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEA-MLSLNTQVDDGSIEEVAERLIVMHEECL
        P D   + Q  IG +LSRW  LQ+AV+N+WGG DS +K + L  ++F   +QS   + ++++E +L E+ +LS NT+++DGSIEEVAE+L+++HEE L
Subjt:  PADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLEMILDEA-MLSLNTQVDDGSIEEVAERLIVMHEECL

AT5G27990.1 Pre-rRNA-processing protein TSR2, conserved region5.5e-3039.9Show/hide
Query:  NRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLY-IDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEE
        N  L  +A  + +EGIGL+L RW+A++ AVEN WGGRDS+ K     + +F +F QSK+P+  I+ L  +LD+ +  LNT  +DGS++EVA  L+ ++E+
Subjt:  NRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLY-IDDLEMILDEAMLSLNTQVDDGSIEEVAERLIVMHEE

Query:  CLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN
        C + N+  +E LR T + Q + S V  +  DD+E D+ED         D    DMMVDA   +       E    A+DGW  V+SR+++G RN
Subjt:  CLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAEDGWVQVTSRRSRGTRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATTTTCACAAATCCAAATCCGATTACGACCACCGCCGCAACCACTGCTGCAAACGGCATCCGAACCACCGCCAATCTCCTGGCGTTTGCTCCCTCTGTTTGAC
CGAAAAGCTCTCGCGAATCCTCTCCGCCGCTACAACGACGACTTCTTCGCGTAAAACCTCCGATTCTCTTTCTTCTTCTAGTTCCTCTTCTTATTACTCCTCTGCTTCCT
CTTCTTCTTCCTGTTCTTCGCCGAATCTTTACAATTACAATACGGATCGTCGTAGGGCGGGTTTTGTGTTCTTTAAGAAGAGTAAATCGATGGCGGCGATTGCGCCGAGA
TTGAGAGGAAGAACAGAGAGTGAGAGTGGAAAGAAGAGGCTGGCCTCATCCTCTCTCTCGATTTCACTCACCGTTCTCAGCTGCTTCAAGGGTTTTACGCTAGGAGGCGA
AGAGATGGAAGGTGGGGGAAACCGCCTTCTCCCAGCTGATGCTTTTCCATTGTTCCAGGAAGGTATCGGGTTGGTTTTATCTCGTTGGTCTGCCCTTCAGTTGGCAGTGG
AAAATGAGTGGGGTGGTCGTGACTCTCGTCGTAAAGTCGAACTATTATGCTCCGACATTTTCACATGGTTTACTCAGAGCAAAGAGCCACTATATATTGATGATTTAGAA
ATGATTCTTGATGAAGCTATGCTTTCATTGAATACTCAGGTTGATGACGGTAGCATTGAGGAGGTAGCTGAAAGATTGATTGTCATGCATGAGGAATGTTTGGATCGTAA
CTTTAGCTCGATCGAAAGGTTAAGGCAAACCCCTCATCCTCAAGTTGCTCATTCTCACGTTAGTCAGGCTGTGAGTGATGATGATGAAGATGATGAAGAAGATGGCAGTG
GTGATGTTGGAAATGGAAGAGATGTCATGAGAAATGATATGATGGTGGATGCCGAACAACCCAGGTCTGTCAATCAGCTCAATCTAGAGGCTACAGCTGAAGCTGAAGAT
GGATGGGTTCAAGTCACATCAAGAAGAAGTAGGGGTACAAGAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATTTTCACAAATCCAAATCCGATTACGACCACCGCCGCAACCACTGCTGCAAACGGCATCCGAACCACCGCCAATCTCCTGGCGTTTGCTCCCTCTGTTTGAC
CGAAAAGCTCTCGCGAATCCTCTCCGCCGCTACAACGACGACTTCTTCGCGTAAAACCTCCGATTCTCTTTCTTCTTCTAGTTCCTCTTCTTATTACTCCTCTGCTTCCT
CTTCTTCTTCCTGTTCTTCGCCGAATCTTTACAATTACAATACGGATCGTCGTAGGGCGGGTTTTGTGTTCTTTAAGAAGAGTAAATCGATGGCGGCGATTGCGCCGAGA
TTGAGAGGAAGAACAGAGAGTGAGAGTGGAAAGAAGAGGCTGGCCTCATCCTCTCTCTCGATTTCACTCACCGTTCTCAGCTGCTTCAAGGGTTTTACGCTAGGAGGCGA
AGAGATGGAAGGTGGGGGAAACCGCCTTCTCCCAGCTGATGCTTTTCCATTGTTCCAGGAAGGTATCGGGTTGGTTTTATCTCGTTGGTCTGCCCTTCAGTTGGCAGTGG
AAAATGAGTGGGGTGGTCGTGACTCTCGTCGTAAAGTCGAACTATTATGCTCCGACATTTTCACATGGTTTACTCAGAGCAAAGAGCCACTATATATTGATGATTTAGAA
ATGATTCTTGATGAAGCTATGCTTTCATTGAATACTCAGGTTGATGACGGTAGCATTGAGGAGGTAGCTGAAAGATTGATTGTCATGCATGAGGAATGTTTGGATCGTAA
CTTTAGCTCGATCGAAAGGTTAAGGCAAACCCCTCATCCTCAAGTTGCTCATTCTCACGTTAGTCAGGCTGTGAGTGATGATGATGAAGATGATGAAGAAGATGGCAGTG
GTGATGTTGGAAATGGAAGAGATGTCATGAGAAATGATATGATGGTGGATGCCGAACAACCCAGGTCTGTCAATCAGCTCAATCTAGAGGCTACAGCTGAAGCTGAAGAT
GGATGGGTTCAAGTCACATCAAGAAGAAGTAGGGGTACAAGAAATTAA
Protein sequenceShow/hide protein sequence
MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRILSAATTTTSSRKTSDSLSSSSSSSYYSSASSSSSCSSPNLYNYNTDRRRAGFVFFKKSKSMAAIAPR
LRGRTESESGKKRLASSSLSISLTVLSCFKGFTLGGEEMEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFTWFTQSKEPLYIDDLE
MILDEAMLSLNTQVDDGSIEEVAERLIVMHEECLDRNFSSIERLRQTPHPQVAHSHVSQAVSDDDEDDEEDGSGDVGNGRDVMRNDMMVDAEQPRSVNQLNLEATAEAED
GWVQVTSRRSRGTRN