CuGenDBv2

Gene ID	Clc11G15550
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	t-SNARE coiled-coil homology domain-containing protein
Genome location	ClcChr11:26434068..26441940
RNA-Seq Expression	Clc11G15550
Synteny	Clc11G15550
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domains	IPR039897 - BET1-like protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136265.1 bet1-like protein At1g29060 [Cucumis sativus]

3.6e-54

88.41

Show/hide

Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MASSSFRGGSSFYNG+AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRN            IAQDIGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

XP_008466185.1 PREDICTED: bet1-like protein At1g29060 [Cucumis melo]

1.9e-55

89.13

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRN            IAQDIGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

XP_022940948.1 bet1-like protein At1g29060 [Cucurbita moschata]

4.6e-54

86.96

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MAS+S+RGGSSFYNG+AAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN            IAQ+IGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

XP_022980898.1 bet1-like protein At1g29060 [Cucurbita maxima]

1.0e-53

86.23

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MAS+S+RGGSSFYNG+AAPYRSREGLSTRP+AASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN            IAQ+IGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

XP_038896659.1 bet1-like protein At1g29060 [Benincasa hispida]

5.5e-55

89.86

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MASSSFRGGSSFYN NAA YRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRN            IAQDIGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHL4 t-SNARE coiled-coil homology domain-containing protein

1.7e-54

88.41

Show/hide

Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MASSSFRGGSSFYNG+AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRN            IAQDIGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

A0A1S3CQM7 bet1-like protein At1g29060

9.1e-56

89.13

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRN            IAQDIGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

A0A5A7TAQ3 Bet1-like protein

9.1e-56

89.13

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRN            IAQDIGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

A0A6J1FQQ6 bet1-like protein At1g29060

2.2e-54

86.96

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MAS+S+RGGSSFYNG+AAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN            IAQ+IGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

A0A6J1J0M1 bet1-like protein At1g29060

5.0e-54

86.23

Show/hide

Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MAS+S+RGGSSFYNG+AAPYRSREGLSTRP+AASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN            IAQ+IGTEAKSQQDFLDQLQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

SwissProt top hits

e value

%identity

Alignment

Q8L9S0 Bet1-like protein At1g29060

3.1e-37

62.32

Show/hide

Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+N            IAQ+IG+EAKSQ+DFLD+LQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        +AQAGVKNN+R+LN  II++G+NH++ VV+FAL+ FFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

Q8VXX9 Bet1-like protein At4g14600

4.1e-37

62.14

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Query:  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMT
        MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+N            IAQ+IG+EAK Q+DFLD+LQMT
Subjt:  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMT

Query:  LIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        LI+AQAGVKNN+R+LN  II++G+NH++ VV+FAL+ FF+
Subjt:  LIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

Arabidopsis top hits

e value

%identity

Alignment

AT1G29060.1 Target SNARE coiled-coil domain protein

2.2e-38

62.32

Show/hide

Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI
        MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+N            IAQ+IG+EAKSQ+DFLD+LQMTLI
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLI

Query:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        +AQAGVKNN+R+LN  II++G+NH++ VV+FAL+ FFI
Subjt:  KAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

AT4G14600.1 Target SNARE coiled-coil domain protein

2.9e-38

62.14

Show/hide

Query:  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMT
        MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+N            IAQ+IG+EAK Q+DFLD+LQMT
Subjt:  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMT

Query:  LIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI
        LI+AQAGVKNN+R+LN  II++G+NH++ VV+FAL+ FF+
Subjt:  LIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCAACGCCGCTCCATATCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTGCTTCTGATGAAAT
TCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTAAAAAGACTTAGAAATAAAGATTTGCTTCTAAATGTTGTGCTAA
GCATTCTAATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACACTGATTAAAGCTCAAGCAGGGGTGAAGAACAACGTA
AGAAGATTGAACAAAAAGATCATACAGAATGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCGTTGATCTGTTTCTTTATAGCTTCCAAGTGTGCCCAGGATATAAG
GATGTTCATATTTGGTCTTCTAGTCCTGCTAAGAGGGTTCTCACACCATTCCTTTTCCTATGTTTTACACGTCTCTTCTCCCTCCCCGATTGCCTTTGCATATTCCCCTC
TCTTAGCTTTTTGTGCAACAAGTTTTACATGGGAGAGTGAATATCTCAAATCGTATTCAAGAACATCCTCTCGTTTTGTAATGCAAAAACAATCATCGTGGGACCCCCCA
AACGCTCGTTTAAGCGCACTACAATGGCCTTCTCGAACGATCCACCATCAGACACGATTCACGAGCTCGGCGGCCTTTTGCTTTAACTCTTCGGCCCGAGCCTCAAAAAG
GTTCATTTGCCGTTCCACCCCCCGATACTCCTTGGAAGACATTAGCCGGCAAAAGGCCTCCCTTTCCTCTTCACTCAACCTTTCTCTAAGCTGCTGCGCGACCTCTGGCG
GGACTATCTTAGTCGCGGGATCGGCCCCGCCTAAGGGTGCACGGAAGCAGGGCATGAAATCAATTAGCAAAATAAACTTACTTAAGACTTCTTCTGCGGTTATCCTAGCT
GAAATATCTCTTGTCAGCATTCTCCCAATGAGATCGCGGGCAGGTTTAGATATGGACTCCCACATCCCGGTGTGGAAGTCGAGCTTAGAGTTCTTTATTGCTTCAAAAAC
TGATTCTAACGAGTCACCTTGGAAAGGAAGAGCGCCAACCAAAAGAGCATGGAGGAGCACACCAGCACTCCAAATATCAACCTTCTCAGAGTACTTTCCTGACAACACTT
CAGGAGCTACATAA

mRNA sequence

Show/hide mRNA sequence

TTCAAAACAAATATAATTATTAAACGACTCGCCAACGCGGCTCTGATAAACGGGAATCGGAAAATTCCCAATTTGCTTGGATCTCTTACCTTCCGGTTGGACCGACGATT
CGAAACTGGTTATAGCGATTCGTCTGGTTCCCATTCGATCATTTCTTTTCGAATTAGGTTTTCATTCTGTATTTAATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTT
CTACAATGGCAACGCCGCTCCATATCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTGCTTCTGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGG
ACGACGAGATCGTTGGTCTCCACAGCCAAGTAAAAAGACTTAGAAATAAAGATTTGCTTCTAAATGTTGTGCTAAGCATTCTAATTGCTCAAGACATTGGGACAGAAGCA
AAGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACACTGATTAAAGCTCAAGCAGGGGTGAAGAACAACGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATC
AAATCATGTCGTCCAGGTCGTCGTATTTGCGTTGATCTGTTTCTTTATAGCTTCCAAGTGTGCCCAGGATATAAGGATGTTCATATTTGGTCTTCTAGTCCTGCTAAGAG
GGTTCTCACACCATTCCTTTTCCTATGTTTTACACGTCTCTTCTCCCTCCCCGATTGCCTTTGCATATTCCCCTCTCTTAGCTTTTTGTGCAACAAGTTTTACATGGGAG
AGTGAATATCTCAAATCGTATTCAAGAACATCCTCTCGTTTTGTAATGCAAAAACAATCATCGTGGGACCCCCCAAACGCTCGTTTAAGCGCACTACAATGGCCTTCTCG
AACGATCCACCATCAGACACGATTCACGAGCTCGGCGGCCTTTTGCTTTAACTCTTCGGCCCGAGCCTCAAAAAGGTTCATTTGCCGTTCCACCCCCCGATACTCCTTGG
AAGACATTAGCCGGCAAAAGGCCTCCCTTTCCTCTTCACTCAACCTTTCTCTAAGCTGCTGCGCGACCTCTGGCGGGACTATCTTAGTCGCGGGATCGGCCCCGCCTAAG
GGTGCACGGAAGCAGGGCATGAAATCAATTAGCAAAATAAACTTACTTAAGACTTCTTCTGCGGTTATCCTAGCTGAAATATCTCTTGTCAGCATTCTCCCAATGAGATC
GCGGGCAGGTTTAGATATGGACTCCCACATCCCGGTGTGGAAGTCGAGCTTAGAGTTCTTTATTGCTTCAAAAACTGATTCTAACGAGTCACCTTGGAAAGGAAGAGCGC
CAACCAAAAGAGCATGGAGGAGCACACCAGCACTCCAAATATCAACCTTCTCAGAGTACTTTCCTGACAACACTTCAGGAGCTACATAA

Protein sequence

Show/hide protein sequence

MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNKDLLLNVVLSILIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV
RRLNKKIIQNGSNHVVQVVVFALICFFIASKCAQDIRMFIFGLLVLLRGFSHHSFSYVLHVSSPSPIAFAYSPLLAFCATSFTWESEYLKSYSRTSSRFVMQKQSSWDPP
NARLSALQWPSRTIHHQTRFTSSAAFCFNSSARASKRFICRSTPRYSLEDISRQKASLSSSLNLSLSCCATSGGTILVAGSAPPKGARKQGMKSISKINLLKTSSAVILA
EISLVSILPMRSRAGLDMDSHIPVWKSSLEFFIASKTDSNESPWKGRAPTKRAWRSTPALQISTFSEYFPDNTSGAT

Clc11G15550 (gene) of Watermelon (cordophanus) v2 genome