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Clc11G15780 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G15780
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBEACH domain-containing protein B
Genome locationClcChr11:26696891..26702345
RNA-Seq ExpressionClc11G15780
SyntenyClc11G15780
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651401.1 hypothetical protein Csa_001622 [Cucumis sativus]6.2e-0984.09Show/hide
Query:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSGPI  +VSGSQANWSH PG KIRFG  G
Subjt:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
XP_008466148.1 PREDICTED: BEACH domain-containing protein B isoform X1 [Cucumis melo]8.7e-1188.64Show/hide
Query:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSGPI  +VSGSQANWSHPPGPKIRFG  G
Subjt:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
XP_008466150.1 PREDICTED: BEACH domain-containing protein B isoform X2 [Cucumis melo]8.7e-1188.64Show/hide
Query:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSGPI  +VSGSQANWSHPPGPKIRFG  G
Subjt:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
XP_011652586.2 LOW QUALITY PROTEIN: BEACH domain-containing protein B [Cucumis sativus]6.2e-0984.09Show/hide
Query:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSGPI  +VSGSQANWSH PG KIRFG  G
Subjt:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
XP_038897530.1 BEACH domain-containing protein B-like [Benincasa hispida]1.1e-1088.64Show/hide
Query:  MNIVKGVADLIRRTSSGPIA--VSGSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSGPI   VSGSQANWSHPPGPKIRFG  G
Subjt:  MNIVKGVADLIRRTSSGPIA--VSGSQANWSHPPGPKIRFGMEG
TrEMBL top hitse value%identityAlignment
A0A0A0LGX7 Uncharacterized protein3.0e-0984.09Show/hide
Query:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSGPI  +VSGSQANWSH PG KIRFG  G
Subjt:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
A0A1S3CQK0 BEACH domain-containing protein B isoform X24.2e-1188.64Show/hide
Query:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSGPI  +VSGSQANWSHPPGPKIRFG  G
Subjt:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
A0A1S3CRY9 BEACH domain-containing protein B isoform X14.2e-1188.64Show/hide
Query:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSGPI  +VSGSQANWSHPPGPKIRFG  G
Subjt:  MNIVKGVADLIRRTSSGPI--AVSGSQANWSHPPGPKIRFGMEG
A0A6J1D0K9 BEACH domain-containing protein B6.7e-0967.86Show/hide
Query:  MNIVKGVADLIRRTSSGPIAV--SGSQANWSHPPGPKIRFGMEG-VPLFSEICQRH
        MNIVKGVADLIRRTSSGP+ V  SGSQANW +PPGPKIRF   G   + SE+  R+
Subjt:  MNIVKGVADLIRRTSSGPIAV--SGSQANWSHPPGPKIRFGMEG-VPLFSEICQRH
A0A6J1J0N9 BEACH domain-containing protein B isoform X14.1e-0675Show/hide
Query:  MNIVKGVADLIRRTSSGPIAVS--GSQANWSHPPGPKIRFGMEG
        MNIVKGVADLIRRTSSG I VS  GSQAN  +PP PKIRF  +G
Subjt:  MNIVKGVADLIRRTSSGPIAVS--GSQANWSHPPGPKIRFGMEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGGAGACTCTTGGGAGTTTGGGAGGGGCACTGACCCATTTTATTCCTTGCCCTACATGGATGTCATGCTTCAAAGATTTCCACCGGGTTTATCACCCCCAAC
AAGTCACACCGCTCTCGCTTCCGTTCATCTGCCGTCGCCATTGAAGAAGCTTCACTTGAGATCCCTCGCCCTGCATCCAAAACCATGGGATTCCATTCCCGAATTTGAGC
TGCGCGATCTGACGAGCTTCTCAGTTTCTGGAACGTATGTTGCTTGTTTATCGGCAACTTGCAGAGAAACAATGCTTGAACTTCTTCGAGTTCTAGTAGGAAGCATGAAC
ATCGTTAAGGGTGTAGCTGACCTGATTCGTAGGACATCTAGTGGCCCTATTGCCGTTTCAGGGTCACAAGCTAACTGGTCACATCCTCCGGGTCCAAAAATACGATTCGG
TATGGAAGGGGTGCCTTTATTCAGTGAGATTTGCCAGAGACATCCTGTCTTCTTAGAGCAACCACATTCTTATGTCTTGCGTGATGGGATGAAAAGAAAATTCCTTAAGA
AGCTGAAACACTACCATTCTTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGGAGACTCTTGGGAGTTTGGGAGGGGCACTGACCCATTTTATTCCTTGCCCTACATGGATGTCATGCTTCAAAGATTTCCACCGGGTTTATCACCCCCAAC
AAGTCACACCGCTCTCGCTTCCGTTCATCTGCCGTCGCCATTGAAGAAGCTTCACTTGAGATCCCTCGCCCTGCATCCAAAACCATGGGATTCCATTCCCGAATTTGAGC
TGCGCGATCTGACGAGCTTCTCAGTTTCTGGAACGTATGTTGCTTGTTTATCGGCAACTTGCAGAGAAACAATGCTTGAACTTCTTCGAGTTCTAGTAGGAAGCATGAAC
ATCGTTAAGGGTGTAGCTGACCTGATTCGTAGGACATCTAGTGGCCCTATTGCCGTTTCAGGGTCACAAGCTAACTGGTCACATCCTCCGGGTCCAAAAATACGATTCGG
TATGGAAGGGGTGCCTTTATTCAGTGAGATTTGCCAGAGACATCCTGTCTTCTTAGAGCAACCACATTCTTATGTCTTGCGTGATGGGATGAAAAGAAAATTCCTTAAGA
AGCTGAAACACTACCATTCTTTTTTGTAG
Protein sequenceShow/hide protein sequence
MDFGDSWEFGRGTDPFYSLPYMDVMLQRFPPGLSPPTSHTALASVHLPSPLKKLHLRSLALHPKPWDSIPEFELRDLTSFSVSGTYVACLSATCRETMLELLRVLVGSMN
IVKGVADLIRRTSSGPIAVSGSQANWSHPPGPKIRFGMEGVPLFSEICQRHPVFLEQPHSYVLRDGMKRKFLKKLKHYHSFL