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Clc11G16580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G16580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:27418611..27424335
RNA-Seq ExpressionClc11G16580
SyntenyClc11G16580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591749.1 hypothetical protein SDJN03_14095, partial [Cucurbita argyrosperma subsp. sororia]7.2e-3249.53Show/hide
Query:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFL----------------
        MEAQN A+DESVSSGPC+DF LNF N  +NH+TTSANSSNVGLGL  E G  GA H  QDSYHQ + NS+P   N SP+ +L L                
Subjt:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFL----------------

Query:  --------------------LQFLPTNLAYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR
                             +      +YHDD+  +P   RKRAR  D  L H  +RE SSSQ S+  KGG G  GRMKNQS      IA K+NPSDGR
Subjt:  --------------------LQFLPTNLAYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR

Query:  PTNSVYDITFEE
        PTNSVYD  FEE
Subjt:  PTNSVYDITFEE

XP_022937227.1 uncharacterized protein LOC111443578 [Cucurbita moschata]1.3e-3650.94Show/hide
Query:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFL----------------
        MEAQN A+DESVSSGPC+DF LNF N  +NH+TTSANSSNVGLGL  E G  GA H  QDSYHQ + NS+P   N SP+++L L                
Subjt:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFL----------------

Query:  --------------------LQFLPTNLAYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR
                             +      +YHDD+PE PK  RKRAR  D  L H  +RE SSSQ S+  KGG G  GRMKNQS      IA K+NPSDGR
Subjt:  --------------------LQFLPTNLAYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR

Query:  PTNSVYDITFEE
        PTNSVYD  FEE
Subjt:  PTNSVYDITFEE

XP_022975919.1 uncharacterized protein LOC111476478 [Cucurbita maxima]5.7e-3752.36Show/hide
Query:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFLL---------------
        MEAQN A+DESVSSGPC+DF LNF N   NH+TTSANSSNVGLGL  E G  GA H  QDSYHQ + NS+P   N SP+++L L                
Subjt:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFLL---------------

Query:  ----------------QFLPTNL-----AYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR
                          +P  L     +YHDD+PE PK  RKRAR  D  L H  VRE  SSQ S+  KGG G  GRMKNQS      IA K+NPSDGR
Subjt:  ----------------QFLPTNL-----AYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR

Query:  PTNSVYDITFEE
        PTNSVYDI FEE
Subjt:  PTNSVYDITFEE

XP_023535733.1 uncharacterized protein LOC111797072 [Cucurbita pepo subsp. pepo]2.5e-1644.37Show/hide
Query:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFL----------------
        MEAQN A+DESVSSGPC+DF LNF N  +NH+TTSANSSNVGLGL  E G  GA H  QDSYHQ + NS+P   N SP+++L L                
Subjt:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFL----------------

Query:  --------------------LQFLPTNLAYHDDQPEEPKFNR
                             +      ++HDDQPE PK  +
Subjt:  --------------------LQFLPTNLAYHDDQPEEPKFNR

TrEMBL top hitse value%identityAlignment
A0A6J1FAJ6 uncharacterized protein LOC1114435786.1e-3750.94Show/hide
Query:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFL----------------
        MEAQN A+DESVSSGPC+DF LNF N  +NH+TTSANSSNVGLGL  E G  GA H  QDSYHQ + NS+P   N SP+++L L                
Subjt:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFL----------------

Query:  --------------------LQFLPTNLAYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR
                             +      +YHDD+PE PK  RKRAR  D  L H  +RE SSSQ S+  KGG G  GRMKNQS      IA K+NPSDGR
Subjt:  --------------------LQFLPTNLAYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR

Query:  PTNSVYDITFEE
        PTNSVYD  FEE
Subjt:  PTNSVYDITFEE

A0A6J1IM01 uncharacterized protein LOC1114764782.7e-3752.36Show/hide
Query:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFLL---------------
        MEAQN A+DESVSSGPC+DF LNF N   NH+TTSANSSNVGLGL  E G  GA H  QDSYHQ + NS+P   N SP+++L L                
Subjt:  MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHP---NNSPIEELFLL---------------

Query:  ----------------QFLPTNL-----AYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR
                          +P  L     +YHDD+PE PK  RKRAR  D  L H  VRE  SSQ S+  KGG G  GRMKNQS      IA K+NPSDGR
Subjt:  ----------------QFLPTNL-----AYHDDQPEEPKFNRKRAR--DGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQS------IAKKKNPSDGR

Query:  PTNSVYDITFEE
        PTNSVYDI FEE
Subjt:  PTNSVYDITFEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTCAAAACCTTGCTAGTGATGAATCTGTTTCCTCAGGGCCTTGTATGGATTTTCACCTCAACTTCAACAACATTCAAAATAACCATGAAACTACTTCTGCCAA
TTCCTCTAATGTGGGATTGGGATTATTGGGAGAAAATGGAGAAGATGGGGCAGTTCATTTACAACAAGATAGCTACCATCAAATCCATCCAAATAGTCATCCAAATAATT
CACCCATTGAGGAATTGTTTTTGCTGCAGTTCCTACCAACAAATTTGGCGTATCATGATGATCAACCTGAAGAACCAAAATTCAATAGAAAGAGAGCTCGAGATGGTGGT
CTAATGCATGGTATCGTTAGAGAGGATTCATCGTCGCAGCCTTCTATACGCATCAAGGGTGGAATTGGGAATTGTGGGAGAATGAAGAATCAATCCATTGCTAAGAAGAA
AAATCCATCCGATGGCAGGCCTACAAACTCGGTTTATGATATAACATTTGAAGAATCACAGAACAAGGATCTTTCAAAGACAAAAACGTTCGGACCATCAAAAGTGTGGG
GGAAGAACAATGAAAGATCAGCAAGCAAAAAGGTAATCAATCTACAACAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCTCAAAACCTTGCTAGTGATGAATCTGTTTCCTCAGGGCCTTGTATGGATTTTCACCTCAACTTCAACAACATTCAAAATAACCATGAAACTACTTCTGCCAA
TTCCTCTAATGTGGGATTGGGATTATTGGGAGAAAATGGAGAAGATGGGGCAGTTCATTTACAACAAGATAGCTACCATCAAATCCATCCAAATAGTCATCCAAATAATT
CACCCATTGAGGAATTGTTTTTGCTGCAGTTCCTACCAACAAATTTGGCGTATCATGATGATCAACCTGAAGAACCAAAATTCAATAGAAAGAGAGCTCGAGATGGTGGT
CTAATGCATGGTATCGTTAGAGAGGATTCATCGTCGCAGCCTTCTATACGCATCAAGGGTGGAATTGGGAATTGTGGGAGAATGAAGAATCAATCCATTGCTAAGAAGAA
AAATCCATCCGATGGCAGGCCTACAAACTCGGTTTATGATATAACATTTGAAGAATCACAGAACAAGGATCTTTCAAAGACAAAAACGTTCGGACCATCAAAAGTGTGGG
GGAAGAACAATGAAAGATCAGCAAGCAAAAAGGTAATCAATCTACAACAGCTTTGA
Protein sequenceShow/hide protein sequence
MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQDSYHQIHPNSHPNNSPIEELFLLQFLPTNLAYHDDQPEEPKFNRKRARDGG
LMHGIVREDSSSQPSIRIKGGIGNCGRMKNQSIAKKKNPSDGRPTNSVYDITFEESQNKDLSKTKTFGPSKVWGKNNERSASKKVINLQQL