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Clc11G16910 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G16910
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP synthase subunit alpha
Genome locationClcChr11:27700293..27700520
RNA-Seq ExpressionClc11G16910
SyntenyClc11G16910
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005754 - mitochondrial proton-transporting ATP synthase, catalytic core (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0043531 - ADP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR020003 - ATPase, alpha/beta subunit, nucleotide-binding domain, active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GCB25816.1 ATP synthase subunit alpha, mitochondrial [Aspergillus awamori]6.9e-0470.27Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
GFF64897.1 hypothetical protein IFM60648_01424 [Aspergillus lentulus]6.9e-0477.78Show/hide
Query:  RGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        RGIRPAINVGLSVSRVGSAAQLKAM + + ++ LYL
Subjt:  RGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
OJI80382.1 hypothetical protein ASPTUDRAFT_59113 [Aspergillus tubingensis CBS 134.48]6.9e-0470.27Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
RDK41069.1 ATP synthase F1, alpha subunit [Aspergillus phoenicis ATCC 13157]6.9e-0470.27Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
XP_035352552.1 ATP synthase F1, alpha subunit [Aspergillus tubingensis]6.9e-0470.27Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
TrEMBL top hitse value%identityAlignment
A0A100IUM3 ATP synthase subunit alpha3.3e-0470.27Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
A0A370PFU9 ATP synthase subunit alpha3.3e-0470.27Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
A0A401L2U7 ATP synthase subunit alpha3.3e-0470.27Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
C8V7Z2 ATP synthase subunit alpha3.3e-0472.97Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRGIRPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
Q5B2Z6 Uncharacterized protein3.3e-0472.97Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        NRGIRPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
SwissProt top hitse value%identityAlignment
P22201 ATP synthase subunit alpha, mitochondrial1.0e-0592.59Show/hide
Query:  RGIRPAINVGLSVSRVGSAAQLKAMNE
        RGIRPAINVGLSVSRVGSAAQLKAM +
Subjt:  RGIRPAINVGLSVSRVGSAAQLKAMNE
P37211 ATP synthase subunit alpha, mitochondrial7.6e-0669.44Show/hide
Query:  RGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
        +G+RPAINVGLSVSRVGSAAQLKAM + + ++ L+L
Subjt:  RGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL
P68542 ATP synthase subunit alpha, mitochondrial1.0e-0592.59Show/hide
Query:  RGIRPAINVGLSVSRVGSAAQLKAMNE
        RGIRPAINVGLSVSRVGSAAQLKAM +
Subjt:  RGIRPAINVGLSVSRVGSAAQLKAMNE
P92549 ATP synthase subunit alpha, mitochondrial1.0e-0592.59Show/hide
Query:  RGIRPAINVGLSVSRVGSAAQLKAMNE
        RGIRPAINVGLSVSRVGSAAQLKAM +
Subjt:  RGIRPAINVGLSVSRVGSAAQLKAMNE
Q06735 ATP synthase subunit alpha, mitochondrial1.0e-0592.59Show/hide
Query:  RGIRPAINVGLSVSRVGSAAQLKAMNE
        RGIRPAINVGLSVSRVGSAAQLKAM +
Subjt:  RGIRPAINVGLSVSRVGSAAQLKAMNE
Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein7.1e-0792.59Show/hide
Query:  RGIRPAINVGLSVSRVGSAAQLKAMNE
        RGIRPAINVGLSVSRVGSAAQLKAM +
Subjt:  RGIRPAINVGLSVSRVGSAAQLKAMNE
ATCG00120.1 ATP synthase subunit alpha2.1e-0682.14Show/hide
Query:  NRGIRPAINVGLSVSRVGSAAQLKAMNE
        N GIRPAINVG+SVSRVGSAAQ+KAM +
Subjt:  NRGIRPAINVGLSVSRVGSAAQLKAMNE
ATMG01190.1 ATP synthase subunit 17.1e-0792.59Show/hide
Query:  RGIRPAINVGLSVSRVGSAAQLKAMNE
        RGIRPAINVGLSVSRVGSAAQLKAM +
Subjt:  RGIRPAINVGLSVSRVGSAAQLKAMNE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAACATCGGCTATGGATCACGCCCATCATCATAAGGGCATCTCGATATGGGGTTGGATCATCGGCCCTGGTGATGGCTCCCCTTACTAGTAAAGGAAACAGGAA
TCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAATGAGGATTCCTTCAATATCTTTCTTTATTTAA
ATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAACATCGGCTATGGATCACGCCCATCATCATAAGGGCATCTCGATATGGGGTTGGATCATCGGCCCTGGTGATGGCTCCCCTTACTAGTAAAGGAAACAGGAA
TCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAATGAGGATTCCTTCAATATCTTTCTTTATTTAA
ATTTTTAA
Protein sequenceShow/hide protein sequence
MFQHRLWITPIIIRASRYGVGSSALVMAPLTSKGNRNRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYLNF