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Clc11G17385 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G17385
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCopper amine oxidase family protein
Genome locationClcChr11:28162556..28163083
RNA-Seq ExpressionClc11G17385
SyntenyClc11G17385
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:1901371 - regulation of leaf morphogenesis (biological process)
GO:1902025 - nitrate import (biological process)
GO:2000280 - regulation of root development (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0005179 - hormone activity (molecular function)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC31035.1 hypothetical protein L484_021337 [Morus notabilis]9.6e-0950Show/hide
Query:  NLFSL-ITLILLLHSISLT-SSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        +L SL + ++LLLHSI  T SSRPLH +HP  +      V       + P P S   FS+N +K  E DAFRPT+PGHSPGVGH  PP
Subjt:  NLFSL-ITLILLLHSISLT-SSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
KAB9571943.1 hypothetical protein FH972_027045 [Carpinus fangiana]7.3e-0943.62Show/hide
Query:  AHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        AHRS  L  LF +I L+L  +  S+ ++RP+                        P P S +SFS+NR+K +E DAFRPT+PGHSPGVGH DPP
Subjt:  AHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
KAG6591857.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2572.34Show/hide
Query:  AHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        A RSLH  NL  LIT  LLLHS+S+T SRPLH I PL SA+A+AVV  +  AI PPAPVS L+FSINR+KYVE DAFRPT+PGHSPGVGHTDPP
Subjt:  AHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
KAG6608019.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1560Show/hide
Query:  MAHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        M  RS HL     L  ++ LL+ +S+T SRP HDI+    + AI V   NR AITPPA +S  +FSINR+KYVEMDAFRPTSPGHSPGVGH DPP
Subjt:  MAHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
OAY24263.1 hypothetical protein MANES_17G001300v8 [Manihot esculenta]1.2e-0846.88Show/hide
Query:  MAHRSLHLNNLFSLITLILLLH-SISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        MA + L L +LFSL  + L LH  ++  +SRPLH IHP     A         ++  P P  A  ++INR K+ E +AFRPTSPGHSPGVGH +PP
Subjt:  MAHRSLHLNNLFSLITLILLLH-SISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
TrEMBL top hitse value%identityAlignment
A0A0A0KWX0 Uncharacterized protein4.3e-2365.66Show/hide
Query:  MAHRSLHLNNLF---SLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVS-ALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        MAHRSLHLN+ F   +L+ L+LLLHS+ +TSSRPLH IHP            N  AITPPAPVS   SFSINR+KYVE DAFRPTSPGHSPGVGH +PP
Subjt:  MAHRSLHLNNLF---SLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVS-ALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
A0A2C9U3U8 Uncharacterized protein6.0e-0946.88Show/hide
Query:  MAHRSLHLNNLFSLITLILLLH-SISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        MA + L L +LFSL  + L LH  ++  +SRPLH IHP     A         ++  P P  A  ++INR K+ E +AFRPTSPGHSPGVGH +PP
Subjt:  MAHRSLHLNNLFSLITLILLLH-SISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
A0A2C9UJ23 Uncharacterized protein1.0e-0847.19Show/hide
Query:  LFSLIT-LILLLH---SISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        LFSL+  +++LLH    ++  +SR LH IHP            N+ ++  P P S + + INR+KY E +AFRPTSPGHSPGVGH DPP
Subjt:  LFSLIT-LILLLH---SISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
A0A5N6L638 Uncharacterized protein3.5e-0943.62Show/hide
Query:  AHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        AHRS  L  LF +I L+L  +  S+ ++RP+                        P P S +SFS+NR+K +E DAFRPT+PGHSPGVGH DPP
Subjt:  AHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
W9S854 Uncharacterized protein4.6e-0950Show/hide
Query:  NLFSL-ITLILLLHSISLT-SSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        +L SL + ++LLLHSI  T SSRPLH +HP  +      V       + P P S   FS+N +K  E DAFRPT+PGHSPGVGH  PP
Subjt:  NLFSL-ITLILLLHSISLT-SSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31670.1 Copper amine oxidase family protein1.1e-0537.63Show/hide
Query:  NLFSLITLILLLHSISLTSSR-PLHDIHPLASASAIAVVDRNRRAITPPAPV--SALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPPVFFS
        + F L  L+L LH  + T++R P+    P +S              +PP+P       F IN +K +E  AFRPT  G S G+GH DPPVF S
Subjt:  NLFSLITLILLLHSISLTSSR-PLHDIHPLASASAIAVVDRNRRAITPPAPV--SALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPPVFFS
AT2G35612.1 FUNCTIONS IN: molecular_function unknown1.5e-0450Show/hide
Query:  PPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP
        PP         INR K +E DAFRPT  G S G+GH +PP
Subjt:  PPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATAGAAGCTTACATTTGAATAACTTGTTTTCCCTTATCACTCTCATTCTTCTTCTTCACTCCATCTCTCTAACATCATCAAGGCCATTGCATGACATTCATCC
ATTGGCCTCAGCCTCTGCCATTGCAGTCGTCGACCGTAATCGTCGTGCTATAACGCCTCCTGCTCCAGTATCAGCGTTGTCGTTCTCGATAAACCGGCATAAATATGTCG
AAATGGACGCATTCCGACCGACCTCGCCCGGGCATAGCCCTGGGGTTGGCCACACGGATCCACCAGTTTTCTTTTCCTCAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCATAGAAGCTTACATTTGAATAACTTGTTTTCCCTTATCACTCTCATTCTTCTTCTTCACTCCATCTCTCTAACATCATCAAGGCCATTGCATGACATTCATCC
ATTGGCCTCAGCCTCTGCCATTGCAGTCGTCGACCGTAATCGTCGTGCTATAACGCCTCCTGCTCCAGTATCAGCGTTGTCGTTCTCGATAAACCGGCATAAATATGTCG
AAATGGACGCATTCCGACCGACCTCGCCCGGGCATAGCCCTGGGGTTGGCCACACGGATCCACCAGTTTTCTTTTCCTCAAAATAA
Protein sequenceShow/hide protein sequence
MAHRSLHLNNLFSLITLILLLHSISLTSSRPLHDIHPLASASAIAVVDRNRRAITPPAPVSALSFSINRHKYVEMDAFRPTSPGHSPGVGHTDPPVFFSSK