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Clc11G17470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G17470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAt4g19430
Genome locationClcChr11:28238798..28239190
RNA-Seq ExpressionClc11G17470
SyntenyClc11G17470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052276.1 hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa]1.4e-4977.69Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MS+STQLLGLG LEKKG+  +K+E+ KRERNG+Y+YKEVS++ E GDSKGRRRRRRR KG+FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYE
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM
        DE+M +    SIDPYFSMPVLPYTTMANC+
Subjt:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM

KAG6608012.1 hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3864.71Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRRR----RRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNEC
        MSVS Q+LGL  L+KK K   ++E L+RER GH++  +    ESE+ GD KGRRR     RRR   +FG AR+VL  N+WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRRR----RRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNEC

Query:  CCDAYEDEKMKKIEVISIDPYFSMPVLPYTTMANCM
        CCDAYEDE+MK++EV  +DPYFSMPV PYTTMANCM
Subjt:  CCDAYEDEKMKKIEVISIDPYFSMPVLPYTTMANCM

KGN55571.1 hypothetical protein Csa_012627 [Cucumis sativus]4.8e-5380.77Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MSVSTQLL LG LEKKGK  +K+E+LKRE NG+Y+YK+VS++EE G+SKGRRRR+RR KG+FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDA+E
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM
        DE+MKK EVISIDPYFSMPVLPYTTMANCM
Subjt:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM

TYK01842.1 hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa]1.9e-4977.69Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MS+STQLLGLG LEKKG+  +K+E+ KRERNG+Y+YKEVS++ E GDSKGRRRRRRR KG+FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYE
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM
        DE+M +    SIDPYFSMPVLPYTTMANC+
Subjt:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM

XP_022940822.1 uncharacterized protein LOC111446301 [Cucurbita moschata]1.9e-3864.71Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRR----RRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNEC
        MSVS Q+LGL  L+KK K   ++E L+RER GH++  +    ESE+ GD KGRRR     RRR   +FG AR+VL  N+WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRR----RRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNEC

Query:  CCDAYEDEKMKKIEVISIDPYFSMPVLPYTTMANCM
        CCDAYEDE+MK++EV  +DPYFSMPV PYTTMANCM
Subjt:  CCDAYEDEKMKKIEVISIDPYFSMPVLPYTTMANCM

TrEMBL top hitse value%identityAlignment
A0A0A0L609 Uncharacterized protein2.3e-5380.77Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MSVSTQLL LG LEKKGK  +K+E+LKRE NG+Y+YK+VS++EE G+SKGRRRR+RR KG+FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDA+E
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM
        DE+MKK EVISIDPYFSMPVLPYTTMANCM
Subjt:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM

A0A5A7UDK1 Uncharacterized protein7.0e-5077.69Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MS+STQLLGLG LEKKG+  +K+E+ KRERNG+Y+YKEVS++ E GDSKGRRRRRRR KG+FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYE
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM
        DE+M +    SIDPYFSMPVLPYTTMANC+
Subjt:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM

A0A5D3BSQ8 Uncharacterized protein9.1e-5077.69Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MS+STQLLGLG LEKKG+  +K+E+ KRERNG+Y+YKEVS++ E GDSKGRRRRRRR KG+FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYE
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM
        DE+M +    SIDPYFSMPVLPYTTMANC+
Subjt:  DEKMKKIEVISIDPYFSMPVLPYTTMANCM

A0A5N5NB14 Uncharacterized protein4.9e-1137.16Show/hide
Query:  SVSTQLLGLGGLE-KKGKNSLKK---------ENLKRERNGHYAYKE-------VSESEELGDSK---GRRRRRRRNKGKFGTAREV-LHLNLWYFTSTI
        S++TQL GL  L+ +KGK  L +         E+L  +R     Y++       +      GD +   GRR++ R+ K   G  RE+  +L LW+ +S+I
Subjt:  SVSTQLLGLGGLE-KKGKNSLKK---------ENLKRERNGHYAYKE-------VSESEELGDSK---GRRRRRRRNKGKFGTAREV-LHLNLWYFTSTI

Query:  SHILRKAKAFYNECCCDAYEDEKMKKI--EVISIDPYFSMPVLPYTTM
        S+ILRK++AFYNE CCD Y D+    +  E++  DPYFS PV+P  T+
Subjt:  SHILRKAKAFYNECCCDAYEDEKMKKI--EVISIDPYFSMPVLPYTTM

A0A6J1FKP2 uncharacterized protein LOC1114463019.4e-3964.71Show/hide
Query:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRR----RRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNEC
        MSVS Q+LGL  L+KK K   ++E L+RER GH++  +    ESE+ GD KGRRR     RRR   +FG AR+VL  N+WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRR----RRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNEC

Query:  CCDAYEDEKMKKIEVISIDPYFSMPVLPYTTMANCM
        CCDAYEDE+MK++EV  +DPYFSMPV PYTTMANCM
Subjt:  CCDAYEDEKMKKIEVISIDPYFSMPVLPYTTMANCM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19430.1 unknown protein3.1e-1050.88Show/hide
Query:  REVLHLN-LWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPVL
        R+V  L+ LWY   +ISHILRKA+AFYNE CCD Y +     +    ++PYFS+PV+
Subjt:  REVLHLN-LWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGGAAAGAACAGCCTCAAGAAAGAGAATTTAAAGAGAGAAAGAAATGGCCATTATGCATACAA
GGAAGTGAGTGAAAGTGAGGAGCTTGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAGAAGAAATAAGGGTAAGTTTGGGACTGCACGGGAAGTTCTTCACTTGAATTTGT
GGTACTTTACTTCAACAATCAGCCATATATTAAGAAAAGCCAAAGCCTTTTATAATGAGTGTTGTTGTGATGCCTATGAAGATGAGAAGATGAAGAAGATTGAAGTGATT
TCTATTGATCCTTATTTCTCAATGCCTGTCTTGCCTTATACTACTATGGCTAATTGTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGGAAAGAACAGCCTCAAGAAAGAGAATTTAAAGAGAGAAAGAAATGGCCATTATGCATACAA
GGAAGTGAGTGAAAGTGAGGAGCTTGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAGAAGAAATAAGGGTAAGTTTGGGACTGCACGGGAAGTTCTTCACTTGAATTTGT
GGTACTTTACTTCAACAATCAGCCATATATTAAGAAAAGCCAAAGCCTTTTATAATGAGTGTTGTTGTGATGCCTATGAAGATGAGAAGATGAAGAAGATTGAAGTGATT
TCTATTGATCCTTATTTCTCAATGCCTGTCTTGCCTTATACTACTATGGCTAATTGTATGTAA
Protein sequenceShow/hide protein sequence
MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVI
SIDPYFSMPVLPYTTMANCM